KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:49 2014 Check: 00 .. Name: ENSTTRP00000011006/1-317 Len: 319 Check: 2727 Weight: 1.00 Name: ENSP00000361748/1-267 Len: 319 Check: 1915 Weight: 1.00 Name: BACU019840/1-309 Len: 319 Check: 7806 Weight: 1.00 Name: bmy_08608T0/1-292 Len: 319 Check: 6487 Weight: 1.00 Name: ENSBTAP00000040706/1-268 Len: 319 Check: 1181 Weight: 1.00 // 1 50 ENSTTRP00000011006/1-317 MAPWALLRPG VLVRTGHTVL TWGITLVLFL HDTESVDELL ATPDHSSNQL ENSP00000361748/1-267 MAPWALLSPG VLVRTGHTVL TWGITLVLFL HDT------- ---------- BACU019840/1-309 MAPWALLRPG VLVRTGHTVL TWGITLVLFL HDTVATPD-- -----HSSNL bmy_08608T0/1-292 MAPWALLRPG VLVRTGHTVL TWGITLVLFL HDT------- ---------- ENSBTAP00000040706/1-268 MAPWALLTPG VLVRTGHTVL TWGITLVLFL HDT------- ---------- 51 100 ENSTTRP00000011006/1-317 QAFPQPGTHF PSSCTPHLHP PILAAASLSP LASPALRQWE EQGELLVPLT ENSP00000361748/1-267 ---------- ---------- ---------- ----ELRQWE EQGELLLPLT BACU019840/1-309 QAFPQPGTHF PSCTPHLHPP ILSPQPHSPP LASPALRQWE EQGELLLPLT bmy_08608T0/1-292 -GEPDPARPW ---TPPIPRD SLDVWPHSPP LASPALRQWE EQGELLLPLT ENSBTAP00000040706/1-268 ---------- ---------- ---------- ----ALRQWE EQGELLLPLT 101 150 ENSTTRP00000011006/1-317 FLLLVLGSLL LYLAVSLMDP GYVNVLPQPQ XXXXXXXXXX XXXXXXXRRC ENSP00000361748/1-267 FLLLVLGSLL LYLAVSLMDP GYVNVQPQPQ EELKEEQTAM VPPAIPLRRC BACU019840/1-309 FLLLVLGSLL LYLAVSLMDP GYVNVLLQPQ EEAKEEQTAM VPQAIPLRRC bmy_08608T0/1-292 FLLLVLGSLL LYLAVSLMDP GYVNVLPQPQ EEAKEEQTAM VPQAIPLRRC ENSBTAP00000040706/1-268 FLLLVLASLL LYLTVSLMDP GYVNVLPQPQ EEAKEEQTAM VPQAIPLRRC 151 200 ENSTTRP00000011006/1-317 RYCMVLQPLR ARHCRECRRC VRRYDHHCPW MENCVGERNH PVFVAYLALQ ENSP00000361748/1-267 RYCLVLQPLR ARHCRECRRC VRRYDHHCPW MENCVGERNH PLFVVYLALQ BACU019840/1-309 RYCMVLQPLR ARHCRECRRC VRRYDHHCPW MENCVGERNH PLFVAYLALQ bmy_08608T0/1-292 RYCMVLQPLR ARHCRECRRC VRRYDHHCPW MENCVGERNH PLFVAYLALQ ENSBTAP00000040706/1-268 RYCMVLQPLR ARHCRECRRC VRRYDHHCPW MENCVGERNH PLFVAYLALQ 201 250 ENSTTRP00000011006/1-317 LVVLLWGLYL AWSGLRFFRP WGLWLRSSGL LFATFLLLSL FSLVASLLLA ENSP00000361748/1-267 LVVLLWGLYL AWSGLRFFQP WGQWLRSSGL LFATFLLLSL FSLVASLLLV BACU019840/1-309 LVVLLWGLYL AWSGLRFFRP WGLWLRSSGL LFATFLLLLL FSLVASLLLA bmy_08608T0/1-292 LVVLLWGL-- --SGLRFFRP WGLWLRSSGL LFATFLLLSL FSLVASLLLA ENSBTAP00000040706/1-268 LVVLLWALYL AWSGLRFFQP WGLWLRSSGL LFATFLLLSL FSLVAGLLLA 251 300 ENSTTRP00000011006/1-317 SHLYLVASNT TTWEFISSHR IAYLRQRPGN PFDRGLTRNL AHFFCGWPSG ENSP00000361748/1-267 SHLYLVASNT TTWEFISSHR IAYLRQRPSN PFDRGLTRNL AHFFCGWPSG BACU019840/1-309 SHLYLVASNT TTWEFIASHR IAYLRQRPGN PFDRGLTRNL AH-FCGWPSG bmy_08608T0/1-292 SHLYLVASNT TTWEFISSHR IAYLRQRPGN PFDRGLTRNL AHFFCGWPSG ENSBTAP00000040706/1-268 SHLYLVASNT TTWEFISSHR IAYLRQRPGN PFDRGLTRNL AHFFCGWPSG 301 350 ENSTTRP00000011006/1-317 SWETLWA--E DEEGSSQDV ENSP00000361748/1-267 SWETLWAE-E EEEGSSPAV BACU019840/1-309 SWETLWA--E EEEGSSQDV bmy_08608T0/1-292 SWETLWA--E EEEGSSQDV ENSBTAP00000040706/1-268 SWEALWAEDE EEEGSSQAV