KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:52 2014 Check: 00 .. Name: ENSP00000293350/1-802 Len: 808 Check: 3418 Weight: 1.00 Name: ENSBTAP00000040728/1-794 Len: 808 Check: 9295 Weight: 1.00 Name: bmy_06382T0/1-595 Len: 808 Check: 6009 Weight: 1.00 Name: BACU018245/1-793 Len: 808 Check: 4145 Weight: 1.00 Name: ENSTTRP00000005151/1-801 Len: 808 Check: 6593 Weight: 1.00 // 1 50 ENSP00000293350/1-802 MAATRAGPRA REIFTSLEYG PVPESHACAL AWLDTQDRCL GHYVNGKWLK ENSBTAP00000040728/1-794 MAATRTASRA CEIFTTLEYG PAPESHACAL AWLDTQDRHL GHYVNGQWLK bmy_06382T0/1-595 MAATRAGSRA CEIFTTLEYG PVPESHACAL AWLDTQDRHL GHYVNGRWLK BACU018245/1-793 MAATRAGSRA CEIFTALEYG PVPESHACAL AWLDTQDRHL GHYVNGRWLK ENSTTRP00000005151/1-801 MAATRTGSRA CEIFTTLEYG PVPESHACA- AWLDTQDRHL GHYVNGRWLK 51 100 ENSP00000293350/1-802 PEHRNSVPCQ DPITGENLAS CLQAQAEDVA AAVEAARMAF KGWSAHPGVV ENSBTAP00000040728/1-794 PEHRSSVPCQ DPITGENLAS CLQAQSEDVA AAVEAARASL ENWSTQPGAI bmy_06382T0/1-595 PEHRSSVPCQ DPITGENLAS CLQAQTEDVA GAVEAARTSL ENWSTQPGAF BACU018245/1-793 PEHRSSVPCQ DPITGENLAS CLQAQTEDVA GAVEAARTSL ENWSTQPGAF ENSTTRP00000005151/1-801 PEHRSSVPCQ DPITGENLAS CLQAQTEDVA GAVEAARTSL ENWSTQPGAF 101 150 ENSP00000293350/1-802 RAQHLTRLAE VIQKHQRLLW TLESLVTGRA VREVRDGDVQ LAQQLLHYHA ENSBTAP00000040728/1-794 RAQHLTRLAK VIQKHQRLLW TLESLVTGRA VREVRDRDVP LAQQLLQYHA bmy_06382T0/1-595 RAQHLTS--- --------PW LLDG------ ---------- ---------- BACU018245/1-793 RAQHLTRLAK MIQKHQRLLW TLESLVTGRA IREVRDRDVP LAQQLLQHHA ENSTTRP00000005151/1-801 RAQHLTRLAK MIQKHQRLLW TLESLVTGRA IREVRDRDVP LAQQLLQHHA 151 200 ENSP00000293350/1-802 IQASTQEEAL AGWEPMGVIG LILPPTFSFL EMMWRICPAL AVGCTVVALV ENSBTAP00000040728/1-794 VQAHTQEEAL AGWEPMGVIG LILSPTFPFL DMMWRICPAL AVGCTVVVLV bmy_06382T0/1-595 --------PF EKFET----G MSLWPSSCSS TMQSRHTPR- ---------- BACU018245/1-793 VQAHTQEEAL AGWEPLGVIG LILPPTFCFL EMMWRICPAL AVGCTVVVLV ENSTTRP00000005151/1-801 VQAHTQEEAL AGWEPLGVIG LILPPTFCFL EMMWRICPAL AVGCTVVVLV 201 250 ENSP00000293350/1-802 PPASPAPLLL AQLAGELGPF PGILNVLSGP ASLVPILASQ PGIRKVAFCG ENSBTAP00000040728/1-794 PPASPTPLLL AQLAGELGPF PGILNVISGP ASLGPVLAAQ PGVQKVAFCG bmy_06382T0/1-595 ---------- ---------- ---------- ---------- ---RRRWQAG BACU018245/1-793 PPASPTPLLV AQLAGELGQF PGILNVISGP ASLGPVLASQ PGVQKVAFCG ENSTTRP00000005151/1-801 PPASPTPLLV AQLAGELGQF PGILNVISGP ASLGPVLASQ PGVQKVAFCG 251 300 ENSP00000293350/1-802 APEEGRALRR SLAGECAELG LALGTESLLL LTDTADVDSA VEGVVDAAWS ENSBTAP00000040728/1-794 AIEEGRALRR TLAGWVPELG LALGAESLLL LTEVADVDSA VEGIVDAAWS bmy_06382T0/1-595 SPWDGRALRR ALAGQGPELG LALGAESLLL LMETADVDSA VEGVVDAAWS BACU018245/1-793 AIEDGRALRR ALAGQGPELG LALGAESLLL LMETADVDSA VEGVVDAAWS ENSTTRP00000005151/1-801 AIEDGRALRR ALAGQGPELG LALGAESLLL LMETADVDSA VEGVVDAAWS 301 350 ENSP00000293350/1-802 DRGPGGLRLL IQESVWDEAM RRLQERMGRL RSGRGLDGAV DMGARGAAAC ENSBTAP00000040728/1-794 DRSPGGLRLL IQEAVWDETM RRLQERMGRL RCGHGLDGAV DMGARGAAAR bmy_06382T0/1-595 DRSPGGLRLL IQESVWDETM RRLQARMGRL RGGRGLDGAV DMGARGAAAR BACU018245/1-793 DRSPGGLRLL IQESVWDETM RRLQARMGRL RGGRGLDGAV DMGARGAAAR ENSTTRP00000005151/1-801 DRSPGGLRLL IQESVWDETM RRLQARMGRL RGGRGLDGAV DMGARGAAAH 351 400 ENSP00000293350/1-802 DLVQRFVREA QSQGAQ-VFQ AGDVPSERPF YPPTLVSNLP PASPCAQVEV ENSBTAP00000040728/1-794 DLAQRYVSEA QSQGAQ-VFQ AGSEPSDSPF FPPTLVSDLP PASPCTQAEV bmy_06382T0/1-595 DLAQRY---- ---------- ---------- ---------- ---------V BACU018245/1-793 DLAQRYVREA QSQGAQ-VFQ AGSMPPDSPF FPPSLVSDLP PASPCTQAEV ENSTTRP00000005151/1-801 DLAQRYVREA QSQGAQXXXX XXSMPPDSPF -SPIMISDLP PASPCSQAEV 401 450 ENSP00000293350/1-802 PWPVVVASPF RTAKEALLVA NGTPRGGSAS VWSERLGQAL ELGYGLQVGT ENSBTAP00000040728/1-794 PWPLVVASPF RTAKEALAVA NGTPRGGSAS VWSERLGQAL ELAYGLQVGT bmy_06382T0/1-595 PWPLVVASPF RTAKEALAMA NWTPRGGSAS VWSERLGQAL ELAYGLQMGT BACU018245/1-793 PWPLVVASPF RTAKEALAMA NWTPRGGSAS VWSERLGQAL ELAYGLQMGT ENSTTRP00000005151/1-801 PWPLVMASPF RTAKEALAVA NWTPRGGSAS VWSERLGQAL ELAYGLQMGT 451 500 ENSP00000293350/1-802 VWINAHGLRD PSVPTGGCKE SGCSWHGGPD GLYEYLRPSG TPARLSCLSK ENSBTAP00000040728/1-794 VWINAHGLRD PAVPMGGCKE SGSSWHGGQD QPGETPAPVG PPS------- bmy_06382T0/1-595 VWINAHGLRD PAVPTGGCKE SGSSWHGGPD GLYEYLRPSG TPTRLPYLSE BACU018245/1-793 VWINAHGLRD PAVPTGGCKE SGSSWHGGPD ECGVLQRLMG ARVVHP---- ENSTTRP00000005151/1-801 VWINAHGLRD PAVPTGGCKE SGSSWHGGPD GLYEYLRPSG TPTCLPYLSE 501 550 ENSP00000293350/1-802 NLNYDTFGLA --V---PSTL PAGPEIGPSP APPYGLFVGG RFQAPGARSS ENSBTAP00000040728/1-794 ------WGLG MSVTRAPRIS LAHPSSSCSP APPYGLFVGG RFQAPGARSS bmy_06382T0/1-595 NLNYDTFGLA --V---PSTL PAGPETGLSP APPYGLFVGG RFQAPGARSS BACU018245/1-793 -VGWG-WGLS SPC---PSTH P-HTSPCSSP APPYGLFVGG RFQAPGARSS ENSTTRP00000005151/1-801 NLNYDTFGLA --V---PSTL PAGPETGLSP APPYGLFVGG RFQAPGARSS 551 600 ENSP00000293350/1-802 RPIRDSSGNL HGYVAEGGAK DIRGAVEAAH QAFPGWAGQS PGARAALLWA ENSBTAP00000040728/1-794 RPIQDSQGSL QGYVAEGGAK DIRGAVEAAH QAAPGWMSQS PAARAALLWA bmy_06382T0/1-595 RPIRDSQGNL HGYVAEGGAK DIRGAVEAAH QAAPGWVGQS PGARAALLWA BACU018245/1-793 RPIRDSQGDL HGYVAEGGAK DIRGAVEAAH QAAPGWVGKS PGARAALLWA ENSTTRP00000005151/1-801 RPIRDSQGNL HGYVAEGGAK DIRGAVEAAH QAAPGWVGQS PGARAALLWA 601 650 ENSP00000293350/1-802 LAAALERRKS TLASRLERQG AELKAAEAEV ELSARRLRAW GARVQAQGHT ENSBTAP00000040728/1-794 LAAALQRREP NLVSRLERHG VELKVAKAEV ELSVKRLRAW GARVQAQGCA bmy_06382T0/1-595 LAAALQRRES TLVSRLERHG VELKVAKAEV ELSVRRLRAW GARVQAPGCT BACU018245/1-793 LAAALQRRES TLVSRLERHG VELKVAKAEV ELSVRRLRAW GARVQAPGCT ENSTTRP00000005151/1-801 LAAALQCRES TLVSRLERHG VELEVAKAEV ELSVRRLRAW GARVQTQGCT 651 700 ENSP00000293350/1-802 LQVAGLRGPV LRLREPLGVL AVVCPDEWPL LAFVSLLAPA LAYGNTVVMV ENSBTAP00000040728/1-794 LQVAELRGPV LRLREPLGVL AIVCPDEWPL LAFVSLLAPA LAHGNTVVLV bmy_06382T0/1-595 L--------- ---------- ---------- ---------- ---------- BACU018245/1-793 LQVAELKGPV LRLQEPLGVL AIVCPEEWPL LAFVSLLAPA LAHGNTVVLV ENSTTRP00000005151/1-801 LQVAGLKGPV LRLQEPLGVL AIVCPEEWPL LAFVSLLAPA LAHGNTVVLV 701 750 ENSP00000293350/1-802 PSAACPLLAL EVCQDMATVF PAGLANVVTG DRDHLTRCLA LHQDVQAMWY ENSBTAP00000040728/1-794 PSGACPIPAL EVCQEMATLL PAGLVNVVTG DRDHLTRCLA LHQDIQALWY bmy_06382T0/1-595 ---------- ---QDMATLL PAGLVNVVTG DRDHLTRCLA LHQDIQALWY BACU018245/1-793 PSGACPIPAL EVCQDMATLL PGGLVNVVTG DRDHLTRCLA LHQDIQALWY ENSTTRP00000005151/1-801 PSGACPIPAL EVCQDMATLL PGGLVNVVTG DRDHLTRCLA LHQDIQALWY 751 800 ENSP00000293350/1-802 FGSAQGSQFV EWASAGNLKP VWASRGCPRA WDQEAEGAGP ELGLRVARTK ENSBTAP00000040728/1-794 FGSAQGSQFV EWASAGNLKP VWVNRGCPRA WDQEAEGAGP ELGRRAARTK bmy_06382T0/1-595 FGSAQGSQFV EWASAGNLKP VWVNRGCPRA WXQDAEGAGP ELGLRAARTK BACU018245/1-793 FGSAQ----V PFAISRNLKP VWVNRGYPRA WDQDAEGAGP ELGLRAARTK ENSTTRP00000005151/1-801 FGSAQGSQFV EWASAGNLKP VWVNRGCPRA WDQDAEGAGP ELGLRAARTK 801 850 ENSP00000293350/1-802 ALWLPMGD ENSBTAP00000040728/1-794 ALWLPMGD bmy_06382T0/1-595 ALWLPMGD BACU018245/1-793 ALWLPMGD ENSTTRP00000005151/1-801 ALWLPMGD