KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:52 2014 Check: 00 .. Name: ENSTTRP00000006088/1-457 Len: 773 Check: 7019 Weight: 1.00 Name: ENSP00000407130/1-516 Len: 773 Check: 3279 Weight: 1.00 Name: ENSBTAP00000040756/1-478 Len: 773 Check: 3664 Weight: 1.00 Name: bmy_03563T0/1-501 Len: 773 Check: 4111 Weight: 1.00 Name: BACU010800/1-745 Len: 773 Check: 4568 Weight: 1.00 // 1 50 ENSTTRP00000006088/1-457 ---------- ---------- ---------- ---------- ---------- ENSP00000407130/1-516 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040756/1-478 ---------- ---------- ---------- ---------- ---------- bmy_03563T0/1-501 ---------- ---------- ---------- ---------- ---------- BACU010800/1-745 MIVQRVVLNS RPGKNGNPVA ENFRVEEVNL PDNINEGQVQ VRTLYLSVDP 51 100 ENSTTRP00000006088/1-457 ---------- ---------- ---------- ---------- ---------- ENSP00000407130/1-516 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040756/1-478 ---------- ---------- ---------- ---------- ---------- bmy_03563T0/1-501 ---------- ---------- ---------- ---------- ---------- BACU010800/1-745 YMVDPQLVDG HLSYFLGAIG MPGLTSLIGI QEKGHITAGS NQTMVVSGAA 101 150 ENSTTRP00000006088/1-457 ---------- ---------- ---------- ---------- ---------- ENSP00000407130/1-516 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040756/1-478 ---------- ---------- ---------- ---------- ---------- bmy_03563T0/1-501 ---------- ---------- ---------- ---------- ---------- BACU010800/1-745 GACGSLAGQI GHLMGCSRVV GICGTPEKCL LLTSELGFDA AINYKEGSVA 151 200 ENSTTRP00000006088/1-457 ---------- ---------- ---------- ---------- ---------- ENSP00000407130/1-516 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040756/1-478 ---------- ---------- ---------- ---------- ---------- bmy_03563T0/1-501 ---------- ---------- ---------- ---------- ---------- BACU010800/1-745 EQLRELCPSG VDVYFDNVGG DISDTVISQM NQDSHIILCG QISQYNKDVP 201 250 ENSTTRP00000006088/1-457 ---------- ---------- ---------- ---------- ---------- ENSP00000407130/1-516 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040756/1-478 ---------- ---------- ---------- ---------- ---------- bmy_03563T0/1-501 ---------- ---------- ---------- ---------- --------ML BACU010800/1-745 YPPPLPSAVE AIRKERNITR ERFLVLNFKD KFESGILQLS QWFKEGKLKL 251 300 ENSTTRP00000006088/1-457 -------MLS DELESKPELL VQFVQNTSIP LGQGLVESEA KDITCLSLLP ENSP00000407130/1-516 -------MLS DELESKPELL VQFVQNTSIP LGQGLVESEA KDITCLSLLP ENSBTAP00000040756/1-478 -------MLS DELESKPELL VQFVQNTSIP LGQGLVESEA KDITCLSLLP bmy_03563T0/1-501 QDLEAESMLS DELESKPELL VQFVQNTSIP LGQGLVESEA KDITCLSLLP BACU010800/1-745 QDLEAESMLS DELESKPELL VQFVQNTSIP LGQGLVESEA KDITCLSLLP 301 350 ENSTTRP00000006088/1-457 VTEASECSRL MLPD------ ---------- -DTPNHTNSS KEVPSSAVLR ENSP00000407130/1-516 VTEASECSRL MLPEPVPWRE EDGKSGCSDL NDTTNHSNSS KEVPSSAVLR ENSBTAP00000040756/1-478 VTEASECSRL MLPD------ ---------- -DTPNHTNSS KEVPSSAVLR bmy_03563T0/1-501 VTEASECSRL MLPD------ ---------- -DTPNHTNSS KEVPSSAVLR BACU010800/1-745 VTEASECSRL MLPD------ ---------- -DTPNHTNSS KEVPSSAVLR 351 400 ENSTTRP00000006088/1-457 SLQVNVGPDG EETRAQTVQK SPEFLSTPES PSLLQDLQPS DSTSFILLNL ENSP00000407130/1-516 SLRVNVGPDG EETRAQTVQK SPEFLSTSES SSLLQDLQPS DSTSFILLNL ENSBTAP00000040756/1-478 SLQVNVGPDG EETRAQTVQK SPEFLSTPES PSLLQDLQPS DSTSFILLNL bmy_03563T0/1-501 SLQVNVGPDG EETRAQTVQK SPEFLSTPES PSLLQDLQPS DSTSFILLNL BACU010800/1-745 SLQVNVGPDG EETRAQTVQK SPEFLSTPES PSLLQDLQPS DSTSFILLNL 401 450 ENSTTRP00000006088/1-457 TRAGLGSSAE HLVFVQDEAE DSGNDFLSSE STDSSIPWFL RVQELAHDSL ENSP00000407130/1-516 TRAGLGSSAE HLVFVQDEAE DSGNDFLSSE STDSSIPWFL RVQELAHDSL ENSBTAP00000040756/1-478 TRAGLGSSAE HLVFVQDEAD DSGNDFLSSE STDSSIPWFL RVQELAHDSL bmy_03563T0/1-501 TRAGLGSSAE HLVFVQDEAE DSGNDFLSSE STDSSIPWFL RVQELAHDSL BACU010800/1-745 TRAGLGSSAE HLVFVQDEAE DSGNDFLSSE STDSSIPWFL RVQELAHDSL 451 500 ENSTTRP00000006088/1-457 IAATRAQLAK NAKTSSNGEN VHLGSGDGQP KDSGPLPQME KKLKCTVEGC ENSP00000407130/1-516 IAATRAQLAK NAKTSSNGEN VHLGSGDGQS KDSGPLPQVE KKLKCTVEGC ENSBTAP00000040756/1-478 IAATRAQLAK NAKTSSNGEN VHLGSGDGQP KDSGPLPQME KKLKCTVEGC bmy_03563T0/1-501 IAATRAQLAK NAKTSSNGEN VHLGSGDGQP KDSGPLPQME KKLKCTVEGC BACU010800/1-745 IAATRAQLAK NAKTSSNGEN VHLGSGDGQP KDSGPLPQME KKLKCTVEGC 501 550 ENSTTRP00000006088/1-457 DRTFVWPAHF KYHLKTHRND RSFICPAAGC GKSFYVLQRL KVHMRTHNGE ENSP00000407130/1-516 DRTFVWPAHF KYHLKTHRND RSFICPAEGC GKSFYVLQRL KVHMRTHNGE ENSBTAP00000040756/1-478 DRTFVWPAHF KYHLKTHRND RSFICPAAGC GKSFYVLQRL KVHMRTHNGE bmy_03563T0/1-501 DRTFVWPAHF KYHLKTHRND RSFICPAAGC GKSFYVLQRL KVHMRTHNGE BACU010800/1-745 DRTFVWPAHF KYHLKTHRND RSFICPAAGC GKSFYVLQRL KVHMRTHNGE 551 600 ENSTTRP00000006088/1-457 KPFMCPESNC GKQFTTAGNL KNHLRIHTXX XXXXXXXXXX XXXXXXXXXX ENSP00000407130/1-516 KPFMCHESGC GKQFTTAGNL KNHRRIHTGE KPFLCEAQGC GRSFAEYSSL ENSBTAP00000040756/1-478 KPFVCPESNC GKQFTTAGNL KNHLRIHTGE KPFLCEAQGC GRSFAEYSSL bmy_03563T0/1-501 KPFMCPESNC GKQFTTAGNL KNHLRIHTGE KPFLCEAQGC GRSFAEYSSL BACU010800/1-745 KPFMCPESNC GKQFTTAGNL KNHLRIHTGE KPFLCEAQGC GRSFAEYSSL 601 650 ENSTTRP00000006088/1-457 XXXXXXXXXE KPHQCQVCGK TFSQSGSRNV ---------- ---------- ENSP00000407130/1-516 RKHLVVHSGE KPHQCQVCGK TFSQSGSRNV HMRKHHLQLG AAGSQEQEQT ENSBTAP00000040756/1-478 RKHLVVHSGE KPHQCQVCGK TFSQSGSRNV HMRKHHLQMG AAGSQEQEPA bmy_03563T0/1-501 RKHLVVHSGE KPHQCQVCGK TFSQSGSRNV HMRKHHLQMG AAGSQEQEQT BACU010800/1-745 RKHLVVHSGE KPHQCQVXXX XXXX----NV HMRKHHLQMG AAGSQEQEQT 651 700 ENSTTRP00000006088/1-457 -EPLMGSSLL EEASVTSKNL VSMNSQPSLG GESLNLPNTN SILGVDDEVL ENSP00000407130/1-516 AEPLMGSSLL EEASVPSKNL VSMNSQPSLG GESLNLPNTN SILGVDDEVL ENSBTAP00000040756/1-478 AEPLMGSSLL EEASVTSKNL VSMNSQPSLG GESLNLPNTN SILGVDDEVL bmy_03563T0/1-501 AEPLMGSSLL EEASVTSKNL VSMNSQPSLG GESLNLPNTN SILGVDDEVL BACU010800/1-745 AEPLMGSSLL EEASVTSKNL VSMNSQPSLG GESLNLPNTN SILGVDDEVL 701 750 ENSTTRP00000006088/1-457 AEGSPRPLSS VPDVTHHLVT MQSGRQSYEV SVLTAVNPQE LLNQ------ ENSP00000407130/1-516 AEGSPRSLSS VPDVTHHLVT MQSGRQSYEV SVLTAVNPQE SLAPLPRLEC ENSBTAP00000040756/1-478 AEGSPRPLSS VPDVTHHLVT MQSGRQSYEV SVLTAVNPQE LLNQ------ bmy_03563T0/1-501 AEGSPRPLSS VPDVTHHLVT MQSGRQSYEV SVLTAVNPQE VKLSL----A BACU010800/1-745 AEGSPRPLSS VPDVTHHLVT MQSGRQSYEV SVLTAVNPQE VKLSL----A 751 800 ENSTTRP00000006088/1-457 ---------- ---GDLTEGR T-- ENSP00000407130/1-516 SGAFSAHCNL CLPGSSDSPA SAS ENSBTAP00000040756/1-478 ---------- ---GDLTERR T-- bmy_03563T0/1-501 LTLFLWRLMW RMIGNLFQRI --- BACU010800/1-745 LTLFLWRLMW RMIGNLFQRI ---