KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 17:50:58 2014 Check: 00 ..
Name: ENSP00000378166/1-493 Len: 936 Check: 2131 Weight: 1.00
Name: ENSBTAP00000040790/1-493 Len: 936 Check: 9847 Weight: 1.00
Name: bmy_07853T0/1-919 Len: 936 Check: 8693 Weight: 1.00
Name: BACU015947/1-499 Len: 936 Check: 4743 Weight: 1.00
//
1 50
ENSP00000378166/1-493 MWSRRQGRLR PTVCGVEELR RRRREREAAL RKARREQQLV SKRLLRNDAP
ENSBTAP00000040790/1-493 MWSGRRGLLR SSGCGVEELR CRRREREAAL RKARREQQLV SKRLLRDEAT
bmy_07853T0/1-919 MWSRQRGGLK PLRCGVEELR CRRREREAAL RKARREQQLV SKRLLRDEAL
BACU015947/1-499 MWSRQRGGLK PLRCGVEQLR CRRREREAAL RKARREQQLV SKRLLRDEAL
51 100
ENSP00000378166/1-493 EEAGEGCVAA ILGETEVQQF LRQAQRGTEE KEREGALVSL RRGLQHPETQ
ENSBTAP00000040790/1-493 EEAEGGCVVV ILGEAEIQEF LRLAQRGTEE KERERALVSL RRGLQHPETQ
bmy_07853T0/1-919 EEAEEGCVAM IFGEAEIQQF LWLAQRGTEE KEREGALVSL RRGLQRPETQ
BACU015947/1-499 EEAEEGCVAM IFGEAEIQQF LRLAQRGTEE KEREGALVSL RRGLQCPETQ
101 150
ENSP00000378166/1-493 QTFIRLEGSM RTLVGLLTSN QALLQLEAAR CLHELSHSEQ STVAEACLPA
ENSBTAP00000040790/1-493 QTFIRLEGSI RTLVGLLTSN QALLQLEAAR CLHELSHSEQ SAVAEACLPA
bmy_07853T0/1-919 QTFIRLEGSI RTLVGLLTSN QALLQLEAAR CLHELSHSEQ SAVVEACLPA
BACU015947/1-499 QTFIRLEGSI RTLVGLLTSN QALLQLEAAR CLHELSHSEQ SAVVEACLPA
151 200
ENSP00000378166/1-493 TSYLLTYLSS HSSDFIELCL YTLGNLIVES EAVRRQLLPQ GIVPALAACI
ENSBTAP00000040790/1-493 TSYLLTYLSG HSSDFIELCL YTLGNLIVES EAVRRQLLPQ GIVPALAACI
bmy_07853T0/1-919 TSYLLTYLSG HSSDFIELCL YTLGNLIVES EAVRRQLLPQ GIVPALAACI
BACU015947/1-499 TSYLLTYLSG HSSDFIELCL YTLGNLIVES EAVRRQLLPQ GIVPALAACI
201 250
ENSP00000378166/1-493 QSPHVAVLEA LGYALSQLLQ AEEAPEKIIP ------SILA STLPQHMLQM
ENSBTAP00000040790/1-493 QSPHLTVLEA LGYALSQLLQ AKEAPEKIIP ------LVLG STLPQHILQL
bmy_07853T0/1-919 QSPHLTVLEA LGYALSQLLQ AKEAPEKIIP SASTDSSVLG STLPQHMLQL
BACU015947/1-499 QSPHLTVLEA LGYALSQLLQ AKEAPEKIIP SASTDSSVLG STLPQHMLQL
251 300
ENSP00000378166/1-493 LQPGPKLNPG VAVEFAWCLH YIICSQVSNP LLIGHGALST LGLLLLDLAG
ENSBTAP00000040790/1-493 LQPGPKLNLG VAVEFAWCLH YIICSQVNNA LLITQGALTT LGLLLLDLAA
bmy_07853T0/1-919 LQPGPKLNLG VAVEFAWCLH YIICSQVNNA LLITQGALST LGLLLLDLAG
BACU015947/1-499 LQPGPKLNLG VAVEFAWCLH YIICSQVNNA LLITQGALST LGLLLLDLAG
301 350
ENSP00000378166/1-493 AVQKTEDAGL ELLACPVLRC LSNLLTEAAV ETVGGQMQLR DERVVAALFI
ENSBTAP00000040790/1-493 AVQRTEDAGL ELLVCPVVRC LSNLLTEAAA ETVGGPMQLR DERVLAALFI
bmy_07853T0/1-919 AVQRTEDAGL ELLACPVLRC LSNLLTEAAA EAVGGQLQLR DERVVAALFI
BACU015947/1-499 AVQRTEDAGL ELLACPVLRC LSNLLTEAAA EAVGGQLQLR DERVVAALFI
351 400
ENSP00000378166/1-493 LLQFFFQKQP SLLPEGLWLL NNLTANSPSF CTSLLSLDLI EPLLQLLPVS
ENSBTAP00000040790/1-493 LLQFFLHKQP SLLPEGLWLL NNLTANSPSF CTSLISLDLI EPLLHLLSVS
bmy_07853T0/1-919 LLQFLLQKQP SLLPEGLWLL NNLTANSPSF CTSLLSLDLI EPLLHLLSVS
BACU015947/1-499 LLQFLLQKQP SLLPEGLWLL NNLTANSPSF CTSLLSLDLI EPLLHLLSVS
401 450
ENSP00000378166/1-493 NVVSVMVLTV LCNVAEKGPA YCQRLWPGPL LPALLHTLAF SDTEVVGQSL
ENSBTAP00000040790/1-493 NVVSVLVLTV LCNIAEKGPA YCQHLWPGLL LPTLLDTLAL SDTEVVGQSL
bmy_07853T0/1-919 NVVSVL---- ---------- ---RLWPGPL LSSLLDTLAF SDTEVVGQSL
BACU015947/1-499 NVVSVLVLTV LCNVAEKGPA YCQRLWPGPL LSSLLDTLAF SDTEVVGQSL
451 500
ENSP00000378166/1-493 ELLHLLFLYQ PEAVQVFLQQ SGLQALERHQ EEAQLQDRVY ALQQTALQG-
ENSBTAP00000040790/1-493 ELLQLLFLYQ PGAAQAFLQQ SGLQALQRHE EVAQLQDRVH ALQQTALHG-
bmy_07853T0/1-919 ELLQLLFLYQ PGAAQAFLQQ SGLQALQRHE EVAQLQDRVH ALQQRALHGS
BACU015947/1-499 ELLQLLFLYQ PGAAQAFLQQ SGLQALQRHE EVAQLQDRVH ALQQTALHG-
501 550
ENSP00000378166/1-493 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000040790/1-493 ---------- ---------- ---------- ---------- ----------
bmy_07853T0/1-919 WWLLMGRNKI NFIFIFNCFA SFDCTIRGSR WNEKQNILRQ HFQHKLYKEQ
BACU015947/1-499 ---------- ---------- ---------- ---------- ----------
551 600
ENSP00000378166/1-493 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000040790/1-493 ---------- ---------- ---------- ---------- ----------
bmy_07853T0/1-919 KNTMPREYNE DEDPAARRRK KKSYYAKLRQ QEIERERELA EKYRDRAKER
BACU015947/1-499 ---------- ---------- ---------- ---------- ----------
601 650
ENSP00000378166/1-493 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000040790/1-493 ---------- ---------- ---------- ---------- ----------
bmy_07853T0/1-919 RDGVNKDYEE TELISTTANY RAVGPTAEAD KSAAEKRRQL IQESKFLGGD
BACU015947/1-499 ---------- ---------- ---------- ---------- ----------
651 700
ENSP00000378166/1-493 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000040790/1-493 ---------- ---------- ---------- ---------- ----------
bmy_07853T0/1-919 MEHTHLVKGL DFALLQKMRI LKIKLNLKHV WAQTTLTTND IVISKLTQIL
BACU015947/1-499 ---------- ---------- ---------- ---------- ----------
701 750
ENSP00000378166/1-493 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000040790/1-493 ---------- ---------- ---------- ---------- ----------
bmy_07853T0/1-919 SYLRQGTRNK KLKKKDKGKM EEKKPPEADM NIFEDIGDYV PSTTKTPRDK
BACU015947/1-499 ---------- ---------- ---------- ---------- ----------
751 800
ENSP00000378166/1-493 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000040790/1-493 ---------- ---------- ---------- ---------- ----------
bmy_07853T0/1-919 ERERYRERER DRERDRDRDR ERERDRERER DREREEEKKR HSYFEKPKVD
BACU015947/1-499 ---------- ---------- ---------- ---------- ----------
801 850
ENSP00000378166/1-493 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000040790/1-493 ---------- ---------- ---------- ---------- ----------
bmy_07853T0/1-919 DEHMLKKPED KKQLGDFFGM SNSYAECYPA TMDDMAVDSD EEVDYSKMDQ
BACU015947/1-499 ---------- ---------- ---------- ---------- ----------
851 900
ENSP00000378166/1-493 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000040790/1-493 ---------- ---------- ---------- ---------- ----------
bmy_07853T0/1-919 GNKKGPLGRW DFDTQEEYSE YMNNKEALPK AAFQYGIKMS EGRKTRRFKE
BACU015947/1-499 ---------- ---------- ---------- ---------- ----------
901 950
ENSP00000378166/1-493 ---------- ---------- ---------- ------
ENSBTAP00000040790/1-493 ---------- ---------- ---------- ------
bmy_07853T0/1-919 TNDKAELDRQ WKKISAIIEK RKKMEADGVE VKRPKY
BACU015947/1-499 ---------- ---------- ---------- ------