KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:58 2014 Check: 00 .. Name: ENSBTAP00000040792/1-237 Len: 278 Check: 5893 Weight: 1.00 Name: bmy_08868T0/1-274 Len: 278 Check: 8574 Weight: 1.00 Name: ENSP00000382090/1-239 Len: 278 Check: 709 Weight: 1.00 Name: BACU010425/1-236 Len: 278 Check: 8752 Weight: 1.00 Name: ENSTTRP00000010079/1-236 Len: 278 Check: 8397 Weight: 1.00 // 1 50 ENSBTAP00000040792/1-237 MANTAVQLLG FLLCFLGLVG TLITTVLPHW RRTAHVGTNI LTAVSYLKGL bmy_08868T0/1-274 MGSAAVQLLG FLLSFLGLVG TLITTILPHW RRTAHVGTNI LTAVSYLKGL ENSP00000382090/1-239 MASTAVQLLG FLLSFLGMVG TLITTILPHW RRTAHVGTNI LTAVSYLKGL BACU010425/1-236 MGSAAVQLLG FLLSFLGLVG TLITTILPHW RRTAHVGTNI LTAVSYLKGL ENSTTRP00000010079/1-236 MASAAVQLMG FLLSFLGMVG TLITTILPHW RRTAHVGTNI LTAVSYLKGL 51 100 ENSBTAP00000040792/1-237 WMECVWHSTG IYQCQIYRSL LALPRDLQAA RALMVVSCLL SGAACASAVV bmy_08868T0/1-274 WMECVWHSTG IYQCQIYRSL LALPRDLQAA RALMVISCLL SGVACACAVV ENSP00000382090/1-239 WMECVWHSTG IYQCQIYRSL LALPQDLQAA RALMVISCLL SGIACACAVI BACU010425/1-236 WMECVWYSTG VYQCQIYRSL LALPRDLQAA RALMVISCLL SGVACACAVV ENSTTRP00000010079/1-236 WMECVWHSTG IYQCQIYRSL LALPRDLQAS RALMVISCLL SGVACACAVV 101 150 ENSBTAP00000040792/1-237 GMQCTRCAKG TPAKTACAAV GGALFLLAGL LCLVAVSWTT HDVVQNFYNP bmy_08868T0/1-274 GMKCTRCAKG TPAKPTFAVL GGVLFLLAGL LCMVAVSWTT NDVVQNFYNP ENSP00000382090/1-239 GMKCTRCAKG TPAKTTFAIL GGTLFILAGL LCMVAVSWTT NDVVQNFYNP BACU010425/1-236 GMKCTRCAKG TPAKPAFAVL GGVLFLLAGL LCMVAVSWTT HDVVQNFYNP ENSTTRP00000010079/1-236 GMKCTRCAKG TPAKTTFAVL GGVFFILAGL LCMVAVSWTT NDVVQNFYNP 151 200 ENSBTAP00000040792/1-237 LLPSGMKFEI GQALYLGFIA SALLLIGGTL LCLACQEEAP TR---APPRA bmy_08868T0/1-274 LLPSGMKFEI GQALYLGFIS SSLSLIGGTL LCLSCQDKAP SRPYQAQPRA ENSP00000382090/1-239 LLPSGMKFEI GQALYLGFIS SSLSLIGGTL LCLSCQDEAP YRPYQAPPRA BACU010425/1-236 LLPSGMKFEI GQALYLGFIS SSLSLIGGTL LCLSCQDEAP SRPYQAQPRA ENSTTRP00000010079/1-236 LLPSGMKFEI GQALYLGFIS SSLSLIGGTL LCLACQDEAP SRPYQAQPRA 201 250 ENSBTAP00000040792/1-237 AAAPTGAPAP ---------- ---------- ---AYRPPDA YKDNRAPSAV bmy_08868T0/1-274 GTA---T-AP CTSASSPRPC RSSAARCSAC PARTRRPPGP TRLSPGPARP ENSP00000382090/1-239 TTTTANT-AP ---------- ---------- ---AYQPPAA YKDNRAPSVT BACU010425/1-236 GTA---T-AP ---------- ---------- ---AYRPPDA YKDNRAPSAT ENSTTRP00000010079/1-236 GTA---T-AP ---------- ---------- ---SYRPPDA YKDNRAPSAT 251 300 ENSBTAP00000040792/1-237 SASHSGYRLN DYV------- -------- bmy_08868T0/1-274 PRPPTGHPTP TRTIGPPRPP RPRTAGTG ENSP00000382090/1-239 SATHSGYRLN DYV------- -------- BACU010425/1-236 SASHSGYRLN DYV------- -------- ENSTTRP00000010079/1-236 SASHNGYRLN DYV------- --------