KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:00 2014 Check: 00 .. Name: ENSP00000370669/1-927 Len: 927 Check: 5490 Weight: 1.00 Name: ENSBTAP00000040809/1-927 Len: 927 Check: 8147 Weight: 1.00 Name: ENSTTRP00000014023/1-920 Len: 927 Check: 7897 Weight: 1.00 Name: bmy_20260T0/1-595 Len: 927 Check: 1663 Weight: 1.00 Name: BACU010776/1-509 Len: 927 Check: 4768 Weight: 1.00 // 1 50 ENSP00000370669/1-927 MAWLRLQPLT SAFLHFGLVT FVLFLNGLRA EAGGSGDVPS TGQNNESCSG ENSBTAP00000040809/1-927 MAWLRLQPLT SAFLHFGLIT FVLFLNGLRA EAGGSGDVPS TGQNNESCTG ENSTTRP00000014023/1-920 MAWLRLQPLT SAFLHFGLIT FVLFLNGLRA EAGGSGDVPS TGQNNESCTG bmy_20260T0/1-595 MAWLRLQPLT SAFLHFGLIT FVLFLNGLRA EAGGSGDVPS TGQNNESCTG BACU010776/1-509 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000370669/1-927 SSDCKEGVIL PIWYPENPSL GDKIARVIVY FVALIYMFLG VSIIADRFMA ENSBTAP00000040809/1-927 SSDCKEGVIL PIWYPENPSL GDKIARVIVY FVALIYMFLG VSIIADRFMA ENSTTRP00000014023/1-920 SSDCKEGVIL PIWYPENPSL GDKIARVIVY FVALIYMFLG VSIIADRFMA bmy_20260T0/1-595 SSDCKEGVIL PIWYPENPSL GDKIARVIVY FVALIYMFLG VSIIADRFMA BACU010776/1-509 ---------- ---------- ---------- ------MFLG VSIIADRFMA 101 150 ENSP00000370669/1-927 SIEVITSQER EVTIKKPNGE TSTTTIRVWN ETVSNLTLMA LGSSAPEILL ENSBTAP00000040809/1-927 SIEVITSQER EVTIKKPNGE TSTTTIRVWN ETVSNLTLMA LGSSAPEILL ENSTTRP00000014023/1-920 SIEVITSQER EVTIKKPNGE TSTTTIRIWN ETVSNLTLMA LGSSAPEILL bmy_20260T0/1-595 SIEVITSQER EVTIKKPNGE TSTTTIRVWN ETVSNLTLMA LGSSAPEILL BACU010776/1-509 SIEVITSQER EVTIKKPNGE TSTTTIRVWN ETVSNLTLMA LGSSAPEILL 151 200 ENSP00000370669/1-927 SLIEVCGHGF IAGDLGPSTI VGSAAFNMFI IIGICVYVIP DGETRKIKHL ENSBTAP00000040809/1-927 SLIEVCGHGF IAGDLGPSTI VGSAAFNMFI IIGICVYVIP DGETRKIKHL ENSTTRP00000014023/1-920 SLIEVCGHGF IAGDLGPSTI VGSAAFNMFI IIGICVYVIP DGETRKIKHL bmy_20260T0/1-595 SLIEVCGHGF IAGDLGPSTI VGSAAFNMFI IIGICVYVIP DGETRKIKHL BACU010776/1-509 SLIEVCGHGF IAGDLGPSTI VGSAAFNMFI IIGICVYVIP DGETRKIKHL 201 250 ENSP00000370669/1-927 RVFFITAAWS IFAYIWLYMI LAVFSPGVVQ VWEGLLTLFF FPVCVLLAWV ENSBTAP00000040809/1-927 RVFFVTAAWS IFAYIWLYMI LAVFSPGVVQ VWEGLLTLFF FPVCVLLAWV ENSTTRP00000014023/1-920 RVFFVTAAWS IFAYIWLYMI LAVFSPGVVQ VWEGLLTLFF FPVCVLLAWV bmy_20260T0/1-595 RVFFVTAAWS IFAYIWLYMI LAVFSPGVVQ VWEGLLTLFF FPVCVLLAWV BACU010776/1-509 RVFFVTAAWS IFAYIWLYMI LAVFSPGVVQ VWEGLLTLFF FPVCVLLAWV 251 300 ENSP00000370669/1-927 ADKRLLFYKY MHKKYRTDKH RGIIIETEGD HPKGIEMDGK MMNSHFLDGN ENSBTAP00000040809/1-927 ADKRLLFYKY MHKKYRTDKH RGIIIETEGD HPKGIEMDGK MMNSHFLDGH ENSTTRP00000014023/1-920 ADRRLLFYKY MHKKYRTDKH RGIIIETEGG HPKGIEMDGK MMNSHFLDGH bmy_20260T0/1-595 ADRRLLFYKY MHKKYRTDKH RGIIIETEGD HPKGIEMDGK MMNSHFLDGH BACU010776/1-509 ADRRLLFYKY MHKKYRTDKH RGIIIETEGD HPKGIEMDGK MMNSHFLDGH 301 350 ENSP00000370669/1-927 LVPLEGKEVD ESRREMIRIL KDLKQKHPEK DLDQLVEMAN YYALSHQQKS ENSBTAP00000040809/1-927 LVPLEGKEVD ESRREMIRIL KDLKQKHPEK DLDQLVEMAN YYALSHQQKS ENSTTRP00000014023/1-920 LVPLEGKEVD ESRREMIRIL KDLKQKHPEK DLDQLVEMAN YYALSHQQKS bmy_20260T0/1-595 LVPLEGKEVD ESRREMIRIL KDLKQKHPEK DLDQLVEMAN YYALSHQQKS BACU010776/1-509 LVPLEGKEVD ESRREMIRIL KDLKQKHPEK DLDQLVEMAN YYALSHQQKS 351 400 ENSP00000370669/1-927 RAFYRIQATR MMTGAGNILK KHAAEQAKKA SSMSEVHTDE PEDFISKVFF ENSBTAP00000040809/1-927 RAFYRIQATR MMTGAGNILK KHAAEQAKKT SSMSEVHADE PEDFVSKVFF ENSTTRP00000014023/1-920 RAFYRIQATR MMTGAGNILK KHAAEQAKKA SSMSEVHTDE PEDFVSKVFF bmy_20260T0/1-595 RAFYRIQATR MMTGAGNILK KHAAEQAKKA SSMSEVHTDE PEDFVSKVFF BACU010776/1-509 RAFYRIQATR MMTGAGNILK KHAAEQAKKS SSMSEVHTDE PEDFVSKVFF 401 450 ENSP00000370669/1-927 DPCSYQCLEN CGAVLLTVVR KGGDMSKTMY VDYKTEDGSA NAGADYEFTE ENSBTAP00000040809/1-927 DPCSYQCLEN CGAVLLTVVR KGGDTSKTLY VDYKTEDGSA NAGADYEFTE ENSTTRP00000014023/1-920 DPCSYQCLEN CGAVLLTVVR KGGDMSKTLY VDYKTEDGSA NAGADYEFTE bmy_20260T0/1-595 DPCSYQCLEN CGAVLLTVVR KGGDMSKTLY VDYKTEDGSA NAGADYEFTE BACU010776/1-509 DPCSYQCLEN CGAVLLTVVR KGGDMSKTLY VDYKTEDGSA NAGADYEFTE 451 500 ENSP00000370669/1-927 GTVVLKPGET QKEFSVGIID DDIFEEDEHF FVRLSNVRIE EEQPEEGMPP ENSBTAP00000040809/1-927 GTVVLKPGET QKEFSVGIID DDIFEEDEHF FVRLSNVRME EEQPEEGMSP ENSTTRP00000014023/1-920 GTVVLKPGET QKEFSVGIID DDIFEEDEHF FVRLSNVRIE EEQPGEGMPP bmy_20260T0/1-595 GTVVLKPGDT QKEFSVGIID DDIFEEDEHF FVRLSNVRIE EEQPEEGMPP BACU010776/1-509 GTVVLKPGET QKEFSVGIID DDIFEEDEHF FVRLSNVRIE EEQPEEGMPP 501 550 ENSP00000370669/1-927 AIFNSLPLPR AVLASPCVAT VTILDDDHAG IFTFECDTIH VSESIGVMEV ENSBTAP00000040809/1-927 RALNSPPLPR AVLVSPCVAT VTILDDDHAG IFTFECDTIH VSESIGVMEV ENSTTRP00000014023/1-920 RVLNSLPLPR AVLVSPCVAT VTILDDDHAG IFTFECDTVH VSESIGIMEV bmy_20260T0/1-595 RALNSLPLPR AVLVSPCVAT VTILDDDHAG IFTFECDTIH VSESIGVMEV BACU010776/1-509 RVLNSLPLPR AVLVSPCVAT VTILDDDHAG IFTFECDTIH VSESIGVMEV 551 600 ENSP00000370669/1-927 KVLRTSGARG TVIVPFRTVE GTAKGGGEDF EDTYGELEFK NDETVKTIRV ENSBTAP00000040809/1-927 KVLRTSGARG TVIVPFRTVE GTAKGGGEDF EDIYGELEFK NDETVKTVRV ENSTTRP00000014023/1-920 KVLRTSGARG TVIVPFRTVE GAAKGGGEDF EDTYGEMEFK NDETVKTVRV bmy_20260T0/1-595 KVLRTSGARG TVIVPFRTVE GTAKGGGEDF EDTYGELEFK NDETV----- BACU010776/1-509 KVLRTSGARG TVIVPFRTVE GTAKGGGEDF EDTYGELEFK NDETV----- 601 650 ENSP00000370669/1-927 KIVDEEEYER QENFFIALGE PKWMERGISA LLLSPDVTDR KLTMEEEEAK ENSBTAP00000040809/1-927 KIVDEEEYER QENFFIVLGE PKWMERGISA LLLSTEVTDR KLTVEEEEAK ENSTTRP00000014023/1-920 KIVDEEEYER QENFFIVLGE PKWMERGLSV FLLPPEVTDR KLTVGEEQR- bmy_20260T0/1-595 ---------- ---------- ---------- ---------- ---------- BACU010776/1-509 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000370669/1-927 RIAEMGKPVL GEHPKLEVII EESYEFKTTV DKLIKKTNLA LVVGTHSWRD ENSBTAP00000040809/1-927 RIAEMGKPIL GEHPKLEVII EESYEFKTTV DKLIRKTNLA LVVGTHSWRD ENSTTRP00000014023/1-920 --IAMGKPIL GEHPKLEVII EXXXXXXTTV DKLIRKTNLA LVVGTHSWRD bmy_20260T0/1-595 ---------- ---------- ---------- ---------- ---------- BACU010776/1-509 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000370669/1-927 QFMEAITVSA AGDEDEDESG EERLPSCFDY VMHFLTVFWK VLFACVPPTE ENSBTAP00000040809/1-927 QFMEAITVSA AGDEDEDESG EERLPSCFDY VMHFLTVFWK VLFACVPPTE ENSTTRP00000014023/1-920 QFMEAITVSA AGDEDEDESG EERLPSCFDY VMHFLTVFWK VLFACVPPTE bmy_20260T0/1-595 ---------- ---------- ---------- ---------- ---------- BACU010776/1-509 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000370669/1-927 YCHGWACFAV SILIIGMLTA IIGDLASHFG CTIGLKDSVT AVVFVAFGTS ENSBTAP00000040809/1-927 YCHGWACFVV SILIIGMLTA IIGDLASHFG CTIGLKDSVT AVIFVAFGTS ENSTTRP00000014023/1-920 YCHGWACFVV SILIIGMLTA IIGDLASHFG CTIGLKDSVT AVVFVAFGTS bmy_20260T0/1-595 ---------- ---------- ---------- ---------- ---------- BACU010776/1-509 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000370669/1-927 VPDTFASKAA ALQDVYADAS IGNVTGSNAV NVFLGIGLAW SVAAIYWALQ ENSBTAP00000040809/1-927 VPDTFASKAA AIQDVYADAS IGNVTGSNAV NVFLGIGLAW SVAAIYWALQ ENSTTRP00000014023/1-920 VPDTFASKAA AVQDVYADAS IGNVTGSNAV NVFLGIGLAW SVAAIYWALQ bmy_20260T0/1-595 ---------- ---------- ---------- ---------- ---------- BACU010776/1-509 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000370669/1-927 GQEFHVSAGT LAFSVTLFTI FAFVCISVLL YRRRPHLGGE LGGPRGCKLA ENSBTAP00000040809/1-927 GQEFHVSAGT LAFSVTLFTI FAFVCISVLL YRRRPHLGGE LGGPRGCKLA ENSTTRP00000014023/1-920 GQEFHVSAGT LAFSVTLFTI FAFVCVSVLL YRRR-HLGGE LGGPRGCKLA bmy_20260T0/1-595 ---------- ---------- ---------- ---------- ---------- BACU010776/1-509 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000370669/1-927 TTWLFVSLWL LYILFATLEA YCYIKGF ENSBTAP00000040809/1-927 TTWLFVSLWL LYILFATLEA YCYIKGF ENSTTRP00000014023/1-920 TTSLFVSL-L LYILFATL-V YCYIKG- bmy_20260T0/1-595 ---------- ---------- ------- BACU010776/1-509 ---------- ---------- -------