KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:01 2014 Check: 00 .. Name: ENSBTAP00000040826/1-395 Len: 487 Check: 803 Weight: 1.00 Name: ENSP00000373399/1-394 Len: 487 Check: 15 Weight: 1.00 Name: ENSTTRP00000015613/1-440 Len: 487 Check: 6081 Weight: 1.00 Name: bmy_04073T0/1-295 Len: 487 Check: 1407 Weight: 1.00 Name: BACU016262/1-471 Len: 487 Check: 9950 Weight: 1.00 // 1 50 ENSBTAP00000040826/1-395 ---------- ---------- ---------- ---------- ---------- ENSP00000373399/1-394 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015613/1-440 ---------- ---------- ---------- ---------- ----RRLGLG bmy_04073T0/1-295 ---------- ---------- ---------- ---------- ---------- BACU016262/1-471 MWGLPPVGTL TNARRPCPAL DRGPKGAAAP GAGPGGGTRR RSPVPPLGLG 51 100 ENSBTAP00000040826/1-395 ---------- ---------- ---------- ---------- -MAAPSPGPR ENSP00000373399/1-394 ---------- ---------- ---------- ---------- -MAAPSPGPR ENSTTRP00000015613/1-440 AAVTGTTRLV GPEAGAGPSS CSGAA---GD AARAREAAAG AMAAPSPGPH bmy_04073T0/1-295 ---------- ---------- ---------- ---------- -VLAPSP--- BACU016262/1-471 ADVTGTTRLV GPEAGAGPGS CSGAARQRGT RPEPGEAAAG AMAAPSPGPR 101 150 ENSBTAP00000040826/1-395 EILAPSPEAG RRAAASSSGH RGLLWRLRDK QCRLGLFEIG PGHELHQVMC ENSP00000373399/1-394 EVLAPSPEAG CRAVTSS--R RGLLWRLRDK QSRLGLFEIS PGHELHGMTC ENSTTRP00000015613/1-440 EVLTPSPEAG HRAATSSSGR RGLLWRLRDK QSRLGLFEIG PGHELHQLTC bmy_04073T0/1-295 -------EAG HRAATSSSGR RGLLWRLRDK QSRLGLFEIG PGHELHQLTC BACU016262/1-471 E-----AEAG HRAATSSSGH RGLLWRLRDK QSRLGLFEIG PGHELHQLTC 151 200 ENSBTAP00000040826/1-395 LMQAGLWAAT QVSMDHPPTG LPTEEDFSEV LTQVHEGFEL GTLAGPVF-R ENSP00000373399/1-394 MMQAGLWAAT QVSMDHPPTG PPSRDDFSEV LTQVHEGFEL GTLAGPAFAW ENSTTRP00000015613/1-440 MMQAGLWAAT QVSMDHPPTG LPTEEDFSEV LTQVHEGFEL GTLAGPAFAR bmy_04073T0/1-295 MMQAGLWAAT QVSMDHPPT- ---------- ------GFEL GTLAGPAFAR BACU016262/1-471 MMQAGLWAAT QVSMDHPPTG LPTEEDFSEV LTQVHEGFEL GTLAGPAFAR 201 250 ENSBTAP00000040826/1-395 LRRSLGLAEE DYQAALGPSR PYLQFLSTSK SKASFFLSHD QRFFLKTLRS ENSP00000373399/1-394 LRRSLGLAEE DYQAALGPGG PYLQFLSTSK SKASFFLSHD QRFFLKTQGR ENSTTRP00000015613/1-440 LRRSLGLAEE DYQAALGPGG PYLQFLSTSK SKASFFLSHD QRFFLKTLRR bmy_04073T0/1-295 LRRSLGLAEE DYQAALGPGG PYLQFLSTSK SKASFFLSHD QRFFLKTLRR BACU016262/1-471 LRRSLGLAEE DYQAALGPGG PYLQFLSTSK SKASFFLSHD QRFFLKTLRR 251 300 ENSBTAP00000040826/1-395 REVQALLAHL PRYVHHLQRH PHSLLARVLG VHSLRVARGK KKYFIVMQSV ENSP00000373399/1-394 REVQALLAHL PRYVQHLQRH PHSLLARLLG VHSLRVDRGK KTYFIVMQSV ENSTTRP00000015613/1-440 REVRALLAHL PRYVQHLQRH PHSLLARLLG VHSLRVARGK KKYFIIMQSV bmy_04073T0/1-295 REVRALLAHL PRYVQHLQRH PHSLLA---- ---------- ---------- BACU016262/1-471 REVRALLAHL PRYVQHLQRH PHSLLARLL- ---------- DTYFIIMQSV 301 350 ENSBTAP00000040826/1-395 FYPAGRISER YDIKGCEVSR WVEPAPEGSV LVLVLKDLNF QGKTINLGPQ ENSP00000373399/1-394 FYPAGRISER YDIKGCEVSR WVDPAPEGSP LVLVLKDLNF QGKTINLGPQ ENSTTRP00000015613/1-440 FYPTGRISER YDIKGCEVSR WVEPAPEGSP LVLVLKDLNF QGKIINLGPQ bmy_04073T0/1-295 ---------R YDIKGCEVSR WVEPAPEGSP LVLVLKDLNF QGKTINLG-- BACU016262/1-471 FYPTGRISER YDIKGCEVSR WVEPAPEGSP LVLVLKDLNF QGKTINLGPQ 351 400 ENSBTAP00000040826/1-395 RSWFLRQMEL DTAFLRELNV LDYSLLMAFQ RLHEDKKGSS SSLILKTPRS ENSP00000373399/1-394 RSWFLRQMEL DTTFLRELNV LDYSLLIAFQ RLHEDERGPG SSLIFRTARS ENSTTRP00000015613/1-440 RSWLLHQMEL DTAFLRELNV LDYSLLMAFQ RLHEDEQGPG SSFIFRTARS bmy_04073T0/1-295 ---------- ---------- ---------- ---------G NLTLLSAPRS BACU016262/1-471 RSWLLRQMEL DTAFLRELNV LDYSLLMAFQ RLHEDERGPG SSLIFRTARS 401 450 ENSBTAP00000040826/1-395 IRGAQSAEES GAQNRRLLPD APNALHIVDG PEHRYFLGLV DLTTVYGLRK ENSP00000373399/1-394 VQGAQSPEES RAQNRRLLPD APNALHILDG PEQRYFLGVV DLATVYGLRK ENSTTRP00000015613/1-440 MRGVQSLEEP EAQNRRLLPD TPNALHILDG PEQRYFLGLV DLTTVYGLRK bmy_04073T0/1-295 MRGVQSLEEP EAQNRRLLPD APNALHILDG PEQRYFLGLV DLATVYGLRK BACU016262/1-471 MRGVQSLEEP EAQNRRLLPD APNALHILDG PEQRYFLGLV DLATVYGLRK 451 500 ENSBTAP00000040826/1-395 RLEQLWKTLR YPGRTFSTVS PACYARRLCQ WVEAHTE ENSP00000373399/1-394 RLEHLWKTLR YPGRTFSTVS PARYARRLCQ WVEAHTE ENSTTRP00000015613/1-440 RLEHLWKTLR YPGRTFSTVS PTRYARRLCQ WVEAHTE bmy_04073T0/1-295 RLEHLWKTLR YPGRTFSTVS PTRYARRLCQ WVEAHTE BACU016262/1-471 RLEHLWKTLR YPGRTFSTVS PTRYARRLCQ WVEAHTE