KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:51:02 2014 Check: 00 .. Name: bmy_14046T0/1-684 Len: 714 Check: 7716 Weight: 1.00 Name: ENSP00000354777/1-615 Len: 714 Check: 2840 Weight: 1.00 Name: ENSTTRP00000004442/1-640 Len: 714 Check: 6837 Weight: 1.00 Name: ENSBTAP00000040836/1-615 Len: 714 Check: 8694 Weight: 1.00 // 1 50 bmy_14046T0/1-684 MGLGGGCETR GQHQAASQLA AELLRPGQGV LGTSSGPPSP PLLVAPALPG ENSP00000354777/1-615 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004442/1-640 ---------- ---------- ---------- ---------A PLHRCSCSPR ENSBTAP00000040836/1-615 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_14046T0/1-684 GPGRAVAQAL AMESMFEDDI SILTQEALGP SEVWLDAPGD PSLGGDMCSA ENSP00000354777/1-615 ---------- -MESMFEDDI SILTQEALGP SEVWLDSPGD PSLGGDMCSA ENSTTRP00000004442/1-640 RPRAGCGPAL AMESMFEDDI SILTQEALGP SEVWLDAPGD PSLGGDMCSA ENSBTAP00000040836/1-615 ---------- -MESMFEDDI SILTQEALGP SEVWLDAPGD PSLGEDMCSA 101 150 bmy_14046T0/1-684 SHFALITAYG DIKERLGGLE RENATLRRRL KVYEIKYPLI NDFGEEHGFS ENSP00000354777/1-615 SHFALITAYG DIKERLGGLE RENATLRRRL KVYEIKYPLI SDFGEEHGFS ENSTTRP00000004442/1-640 SHFALITAYG DIKERLGGLE RENATLRRRL KVYEIKYPLI NDFGEEHGFS ENSBTAP00000040836/1-615 SHFALITAYG DIKERLGGLE RENATLRRRL KVYEIKYPLI SDFGEEHGFS 151 200 bmy_14046T0/1-684 LYEIKDGSLL EVEKVSLQQR LNQFQHELQK NKEQEEQLGE MIQAYEKLCV ENSP00000354777/1-615 LYEIKDGSLL EVEKVSLQQR LNQFQHELQK NKEQEEQLGE MIQAYEKLCV ENSTTRP00000004442/1-640 LYEIKDGSLL EVEKVSLQQR LNQFQHELQK NKEQEEQLGE MIQAYEKLCV ENSBTAP00000040836/1-615 LYEIKDGSLL EVEKVSLQQR LNQFQHELQK NKEQEEQLGE MIQAYEKLCV 201 250 bmy_14046T0/1-684 EKSDLETELG EMRALVETHL RQICGLEQQL RQQQGLRDAA FPSLSPPTAP ENSP00000354777/1-615 EKSDLETELR EMRALVETHL RQICGLEQQL RQQQGLQDAA FSNLSPPPAP ENSTTRP00000004442/1-640 EKSDLETELG EMRALVETHL RQICGLEQQL RQQQGLRDAA FPSLSPPPAP ENSBTAP00000040836/1-615 EKSDLETELG EMRALVETHL RQICGLEQQL RQQQGLRDVD FPSLSPPPAP 251 300 bmy_14046T0/1-684 APPCADLDLH YLALRGGSGL SH-------- ---------- ---------E ENSP00000354777/1-615 APPCTDLDLH YLALRGGSGL SHAGWPGSTP SVSDLERRRL EEALEAAQGE ENSTTRP00000004442/1-640 APPCADLDLH YLALRGGSGL SHAGWPGPTP SMSELERRQL EEALEAAQGE ENSBTAP00000040836/1-615 APPCADLDLH YLALRGGSSL SHAGWPGATP SMSELERRRL EEALEAAQGE 301 350 bmy_14046T0/1-684 ARGAQLREEQ LQAECERLQG ELKQLQETRA QDLASNQSER DMAWVKRVGD ENSP00000354777/1-615 ARGAQLREEQ LQAECERLQG ELKQLQETRA QDLASNQSER DMAWVKRVGD ENSTTRP00000004442/1-640 ARGAQLREEQ LQAECERLQG ELKQLQETRA QDLASNQSER DMAWVKRVGD ENSBTAP00000040836/1-615 ARGAQLREEQ LQAECERLQG ELKQLQETRA QDLASNQSER DMAWVKRVGD 351 400 bmy_14046T0/1-684 DQVNLALAYT ELTEELGRLR ELSSLQGRIL RTLLQEQARS GGQRHSPLSQ ENSP00000354777/1-615 DQVNLALAYT ELTEELGRLR ELSSLQGRIL RTLLQEQARS GGQRHSPLSQ ENSTTRP00000004442/1-640 DQVNLALAYT ELTEELGRLR ELSSLQGRIL RTLLQEQARS GGQRHSPLSQ ENSBTAP00000040836/1-615 DQVNLALAYT ELTEELGRLR ELSSLQGRIL RTLLQEQARS GGQRHSPLSQ 401 450 bmy_14046T0/1-684 RHSPAPQCPS HSPPARAAPP CPPCQSPVPQ RRSPGPPCPS PQQRRSPASP ENSP00000354777/1-615 RHSPAPQCPS PSPPARAAPP CPPCQSPVPQ RRSPVPPCPS PQQRRSPASP ENSTTRP00000004442/1-640 RHSPAPQCPS HSPPARAAPP CPPCQSPVPQ RRSPGPPCPS PQQRRSPASP ENSBTAP00000040836/1-615 RHSPAPQCPS HSPPARAAPP CPPCQSPVPQ RRSPGPPCPS PQQRRSPASP 451 500 bmy_14046T0/1-684 SCPSPVPQRR SPVPPPCQSP SPQCRSPGPP ACPAPQPRPP PPPPPGERTL ENSP00000354777/1-615 SCPSPVPQRR SPVPPSCQSP SPQRRSPVPP SCPAPQPRPP PPPPPGERTL ENSTTRP00000004442/1-640 SCPSPVPQRR SPVPPPCQSP SPQCRSPGPP ACPAPQPRPP PPPPPGERTL ENSBTAP00000040836/1-615 SCPSPVPQRR SPVPPPCQSP SPQRRSPGPP TCPAPQPRPP PPPPPGERTL 501 550 bmy_14046T0/1-684 AERAYAKPPS HHVKAGFQGR RSYSEMAEGA GYTGASPPWL QAEAATLPKP ENSP00000354777/1-615 AERAYAKPPS HHVKAGFQGR RSYSELAEGA AYAGASPPWL QAEAATLPKP ENSTTRP00000004442/1-640 GERAYAKPPS HHVKAGFQGR RSYSEMAEGA GYAGASPPWL QAEAATLPKP ENSBTAP00000040836/1-615 AERAYAKPPS HHVKAGFQGR RSYSEMAEGA GYAGASPPWL QAEAATLPKP 551 600 bmy_14046T0/1-684 RAYGSELYVP GRPLSPRHAF EGIRLRFEKQ PSEEEEWAVP A---SPPSPE ENSP00000354777/1-615 RAYGSELYGP GRPLSPRRAF EGIRLRFEKQ PSEEDEWAVP T---SPPSPE ENSTTRP00000004442/1-640 RAYGSELYGP GRPLSPRRAF EGIRLRFEKQ PSEEEEWAVP ASPPSPPSPE ENSBTAP00000040836/1-615 RAYGGELYGP GRPLSPRRAF EGIRLRFEKQ PSEEEEWAVP A---SPPSPE 601 650 bmy_14046T0/1-684 AGAIRCASRP PPPPTRLIDG RGSLPLIPPP SRGAATPLSP PSLPRVPGKG ENSP00000354777/1-615 VGTIRCASFC AGFP------ ---------- ---------- --IPESPAAT ENSTTRP00000004442/1-640 AGAIRCASFC AGFP------ ---------- ---------- --IPESPAAT ENSBTAP00000040836/1-615 AGAIRCASFC AGFP------ ---------- ---------- --VPESPAAT 651 700 bmy_14046T0/1-684 RLGCGDHDGG LWTINDSLLS PQLLMETVGS DIRSCPLCQL GFPVGYPDDA ENSP00000354777/1-615 AYAHAEHAQS WPSIN----- --LLMETVGS DIRSCPLCQL GFPVGYPDDA ENSTTRP00000004442/1-640 AYTHAEHAQS WPSIN----- --LLMETVGS DIRSCPLCQL GFPVGYPDDA ENSBTAP00000040836/1-615 AYAHAEHAQS WPSIN----- --LLMETVGS DILSCPLCQL GFPVGYPDDA 701 750 bmy_14046T0/1-684 LIKHIDSHLE NSKI ENSP00000354777/1-615 LIKHIDSHLE NSKI ENSTTRP00000004442/1-640 LIKHIDSHLE NSKI ENSBTAP00000040836/1-615 LIKHIDSHLE NSKI