KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 17:51:02 2014 Check: 00 ..
Name: bmy_14046T0/1-684 Len: 714 Check: 7716 Weight: 1.00
Name: ENSP00000354777/1-615 Len: 714 Check: 2840 Weight: 1.00
Name: ENSTTRP00000004442/1-640 Len: 714 Check: 6837 Weight: 1.00
Name: ENSBTAP00000040836/1-615 Len: 714 Check: 8694 Weight: 1.00
//
1 50
bmy_14046T0/1-684 MGLGGGCETR GQHQAASQLA AELLRPGQGV LGTSSGPPSP PLLVAPALPG
ENSP00000354777/1-615 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000004442/1-640 ---------- ---------- ---------- ---------A PLHRCSCSPR
ENSBTAP00000040836/1-615 ---------- ---------- ---------- ---------- ----------
51 100
bmy_14046T0/1-684 GPGRAVAQAL AMESMFEDDI SILTQEALGP SEVWLDAPGD PSLGGDMCSA
ENSP00000354777/1-615 ---------- -MESMFEDDI SILTQEALGP SEVWLDSPGD PSLGGDMCSA
ENSTTRP00000004442/1-640 RPRAGCGPAL AMESMFEDDI SILTQEALGP SEVWLDAPGD PSLGGDMCSA
ENSBTAP00000040836/1-615 ---------- -MESMFEDDI SILTQEALGP SEVWLDAPGD PSLGEDMCSA
101 150
bmy_14046T0/1-684 SHFALITAYG DIKERLGGLE RENATLRRRL KVYEIKYPLI NDFGEEHGFS
ENSP00000354777/1-615 SHFALITAYG DIKERLGGLE RENATLRRRL KVYEIKYPLI SDFGEEHGFS
ENSTTRP00000004442/1-640 SHFALITAYG DIKERLGGLE RENATLRRRL KVYEIKYPLI NDFGEEHGFS
ENSBTAP00000040836/1-615 SHFALITAYG DIKERLGGLE RENATLRRRL KVYEIKYPLI SDFGEEHGFS
151 200
bmy_14046T0/1-684 LYEIKDGSLL EVEKVSLQQR LNQFQHELQK NKEQEEQLGE MIQAYEKLCV
ENSP00000354777/1-615 LYEIKDGSLL EVEKVSLQQR LNQFQHELQK NKEQEEQLGE MIQAYEKLCV
ENSTTRP00000004442/1-640 LYEIKDGSLL EVEKVSLQQR LNQFQHELQK NKEQEEQLGE MIQAYEKLCV
ENSBTAP00000040836/1-615 LYEIKDGSLL EVEKVSLQQR LNQFQHELQK NKEQEEQLGE MIQAYEKLCV
201 250
bmy_14046T0/1-684 EKSDLETELG EMRALVETHL RQICGLEQQL RQQQGLRDAA FPSLSPPTAP
ENSP00000354777/1-615 EKSDLETELR EMRALVETHL RQICGLEQQL RQQQGLQDAA FSNLSPPPAP
ENSTTRP00000004442/1-640 EKSDLETELG EMRALVETHL RQICGLEQQL RQQQGLRDAA FPSLSPPPAP
ENSBTAP00000040836/1-615 EKSDLETELG EMRALVETHL RQICGLEQQL RQQQGLRDVD FPSLSPPPAP
251 300
bmy_14046T0/1-684 APPCADLDLH YLALRGGSGL SH-------- ---------- ---------E
ENSP00000354777/1-615 APPCTDLDLH YLALRGGSGL SHAGWPGSTP SVSDLERRRL EEALEAAQGE
ENSTTRP00000004442/1-640 APPCADLDLH YLALRGGSGL SHAGWPGPTP SMSELERRQL EEALEAAQGE
ENSBTAP00000040836/1-615 APPCADLDLH YLALRGGSSL SHAGWPGATP SMSELERRRL EEALEAAQGE
301 350
bmy_14046T0/1-684 ARGAQLREEQ LQAECERLQG ELKQLQETRA QDLASNQSER DMAWVKRVGD
ENSP00000354777/1-615 ARGAQLREEQ LQAECERLQG ELKQLQETRA QDLASNQSER DMAWVKRVGD
ENSTTRP00000004442/1-640 ARGAQLREEQ LQAECERLQG ELKQLQETRA QDLASNQSER DMAWVKRVGD
ENSBTAP00000040836/1-615 ARGAQLREEQ LQAECERLQG ELKQLQETRA QDLASNQSER DMAWVKRVGD
351 400
bmy_14046T0/1-684 DQVNLALAYT ELTEELGRLR ELSSLQGRIL RTLLQEQARS GGQRHSPLSQ
ENSP00000354777/1-615 DQVNLALAYT ELTEELGRLR ELSSLQGRIL RTLLQEQARS GGQRHSPLSQ
ENSTTRP00000004442/1-640 DQVNLALAYT ELTEELGRLR ELSSLQGRIL RTLLQEQARS GGQRHSPLSQ
ENSBTAP00000040836/1-615 DQVNLALAYT ELTEELGRLR ELSSLQGRIL RTLLQEQARS GGQRHSPLSQ
401 450
bmy_14046T0/1-684 RHSPAPQCPS HSPPARAAPP CPPCQSPVPQ RRSPGPPCPS PQQRRSPASP
ENSP00000354777/1-615 RHSPAPQCPS PSPPARAAPP CPPCQSPVPQ RRSPVPPCPS PQQRRSPASP
ENSTTRP00000004442/1-640 RHSPAPQCPS HSPPARAAPP CPPCQSPVPQ RRSPGPPCPS PQQRRSPASP
ENSBTAP00000040836/1-615 RHSPAPQCPS HSPPARAAPP CPPCQSPVPQ RRSPGPPCPS PQQRRSPASP
451 500
bmy_14046T0/1-684 SCPSPVPQRR SPVPPPCQSP SPQCRSPGPP ACPAPQPRPP PPPPPGERTL
ENSP00000354777/1-615 SCPSPVPQRR SPVPPSCQSP SPQRRSPVPP SCPAPQPRPP PPPPPGERTL
ENSTTRP00000004442/1-640 SCPSPVPQRR SPVPPPCQSP SPQCRSPGPP ACPAPQPRPP PPPPPGERTL
ENSBTAP00000040836/1-615 SCPSPVPQRR SPVPPPCQSP SPQRRSPGPP TCPAPQPRPP PPPPPGERTL
501 550
bmy_14046T0/1-684 AERAYAKPPS HHVKAGFQGR RSYSEMAEGA GYTGASPPWL QAEAATLPKP
ENSP00000354777/1-615 AERAYAKPPS HHVKAGFQGR RSYSELAEGA AYAGASPPWL QAEAATLPKP
ENSTTRP00000004442/1-640 GERAYAKPPS HHVKAGFQGR RSYSEMAEGA GYAGASPPWL QAEAATLPKP
ENSBTAP00000040836/1-615 AERAYAKPPS HHVKAGFQGR RSYSEMAEGA GYAGASPPWL QAEAATLPKP
551 600
bmy_14046T0/1-684 RAYGSELYVP GRPLSPRHAF EGIRLRFEKQ PSEEEEWAVP A---SPPSPE
ENSP00000354777/1-615 RAYGSELYGP GRPLSPRRAF EGIRLRFEKQ PSEEDEWAVP T---SPPSPE
ENSTTRP00000004442/1-640 RAYGSELYGP GRPLSPRRAF EGIRLRFEKQ PSEEEEWAVP ASPPSPPSPE
ENSBTAP00000040836/1-615 RAYGGELYGP GRPLSPRRAF EGIRLRFEKQ PSEEEEWAVP A---SPPSPE
601 650
bmy_14046T0/1-684 AGAIRCASRP PPPPTRLIDG RGSLPLIPPP SRGAATPLSP PSLPRVPGKG
ENSP00000354777/1-615 VGTIRCASFC AGFP------ ---------- ---------- --IPESPAAT
ENSTTRP00000004442/1-640 AGAIRCASFC AGFP------ ---------- ---------- --IPESPAAT
ENSBTAP00000040836/1-615 AGAIRCASFC AGFP------ ---------- ---------- --VPESPAAT
651 700
bmy_14046T0/1-684 RLGCGDHDGG LWTINDSLLS PQLLMETVGS DIRSCPLCQL GFPVGYPDDA
ENSP00000354777/1-615 AYAHAEHAQS WPSIN----- --LLMETVGS DIRSCPLCQL GFPVGYPDDA
ENSTTRP00000004442/1-640 AYTHAEHAQS WPSIN----- --LLMETVGS DIRSCPLCQL GFPVGYPDDA
ENSBTAP00000040836/1-615 AYAHAEHAQS WPSIN----- --LLMETVGS DILSCPLCQL GFPVGYPDDA
701 750
bmy_14046T0/1-684 LIKHIDSHLE NSKI
ENSP00000354777/1-615 LIKHIDSHLE NSKI
ENSTTRP00000004442/1-640 LIKHIDSHLE NSKI
ENSBTAP00000040836/1-615 LIKHIDSHLE NSKI