KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:03 2014 Check: 00 .. Name: ENSP00000360421/1-428 Len: 507 Check: 4954 Weight: 1.00 Name: BACU000247/1-455 Len: 507 Check: 7132 Weight: 1.00 Name: ENSBTAP00000040839/1-428 Len: 507 Check: 3384 Weight: 1.00 Name: bmy_18831T0/1-452 Len: 507 Check: 3006 Weight: 1.00 Name: ENSTTRP00000009649/1-427 Len: 507 Check: 2268 Weight: 1.00 // 1 50 ENSP00000360421/1-428 ---------- ---------- ---------- ------MSYY LSSENHLDPG BACU000247/1-455 MESDFLDFHR KWSSIHPFVH FTPKFMEDTI AVATKAMSYY LNSENHLDPG ENSBTAP00000040839/1-428 ---------- ---------- ---------- ------MSYY LNSENHLDSG bmy_18831T0/1-452 ---------- ---------- ---------- ------MSYY LNSENHLDPG ENSTTRP00000009649/1-427 ---------- ---------- ---------- ------MSYY LNSENHLDPG 51 100 ENSP00000360421/1-428 PIYMRENGQL HMVNLALDGV RSSLQKPRPF RLFPKGFSVE LCMNREDDTA BACU000247/1-455 PVYVRENGQL HMVNLALDGV RSSLQKPRPF RLFPKGFSVE LCMNREDDTA ENSBTAP00000040839/1-428 PIYVRENGQL HMVNLALDDV RSSLQKPRPF RLFPKGFSVE LCMNREDDTA bmy_18831T0/1-452 PVYVRENGQL HMVNLALDGV RSSLQKPRPF RLFPKGFSVE LCMNREDDTA ENSTTRP00000009649/1-427 PVYVRENGQL HMVNLALDGV RSSLQKPRPF RLFPKGFSVE LCMNREDDTA 101 150 ENSP00000360421/1-428 RKEKTDHFIF TYTREGNLRY SAKSLFSLVL GFISDNVDHI DSLIGFPEQI BACU000247/1-455 QKEKTDHFIF TYTREGNLRY SAKSLFSLVL GFISDNVDHI DSLIGFPEQI ENSBTAP00000040839/1-428 QKEKTDHFIF TYTREGNLRY SAKSLFSLVL GFISDNVDHI DSLIGFPEQI bmy_18831T0/1-452 QKEKTDHFIF TYTREGNLRY SAKSLFSLVL GFISDNVDHI DSLIGFPEQI ENSTTRP00000009649/1-427 QKEKTDHFIF TYTREGNLRY SAKSLFSLVL GFISDNVDHI DSLIGFPEQI 151 200 ENSP00000360421/1-428 AEKLFSAAEA RQKFTEPGAG LRALQKFTEA YGSLVLCSLC LRNRYLVISE BACU000247/1-455 AEKLFSAAEA RQKFTEPGAG LRALQKFTEA YGSLVLCSLC LRNRYLVISE ENSBTAP00000040839/1-428 AEKLFSAAEA RQKFTEPGAG LRALQKFTEA YGSLVLCSLC LRNRYLVISE bmy_18831T0/1-452 AEKLFSAAEA RQKFTEPGAG LRALQKFTEA YGSLVLCSLC LRNRYLVISE ENSTTRP00000009649/1-427 AEKLFSAAEA RQKFTEPGAG LRALQKFTEA YGSLVLCSLC LRNRYLVISE 201 250 ENSP00000360421/1-428 KLEEIKSFRE LTCLDLSCCK LGDEHELLEH LTNEALSSVT QLHLKDNCLS BACU000247/1-455 KLEEIKSFRE LTCLDLSCCK LGDEHELLEH LTNEALSSVT QLHLKDNCLS ENSBTAP00000040839/1-428 KLEEIKSFRE LTCLDLSCCK LGDEHELLEH LTNEALSSVT QLRLKDNCLS bmy_18831T0/1-452 KLEEIKSFRE LTCLDLSCCK LGDEHELLEH LTNEALSSVT QLHLKDNCLS ENSTTRP00000009649/1-427 KLEEIKSFRE LTCLDLSCCK LGDEHELLEH LTNEALSSVT QLHLKDNCLS 251 300 ENSP00000360421/1-428 DAGVRKMTAP VRVMKRGLEN LTLLDLSCNP EITDAGIGYL FSFRKLNCLD BACU000247/1-455 DAGVRKMTAP VRVMKRGLEN LTLLDLSCNP EITDAGIGYL FSFRKLNCLD ENSBTAP00000040839/1-428 DAGVRKMTAP VRVMKRGLEN LSLLDLSCNP EITDAGIGYL FSFRKLNCLD bmy_18831T0/1-452 DAGVRKMTAP VR-------- ---------- -ITDAGIGYL FSFRKLNCLD ENSTTRP00000009649/1-427 DAGVRKMTAP VRVMKRGLEN LTLLDLSCNP DITDAGIGYL FSFRKLNCLD 301 350 ENSP00000360421/1-428 ISGTGLKDIK TVKHKLQTHI GLVHSKVPLK EFDHSNCKTE GWADQ----- BACU000247/1-455 ISGTGLKDVK AVKHKLQTRI GLVHSKVPLK EFDHSNCKTE GWADQ----- ENSBTAP00000040839/1-428 ISGTGLKDIK AVKHKLQTHI GLVHSKVPLK EFDHSNCKTE GWADQ----- bmy_18831T0/1-452 ISGTGLKDVK AVKHKLQTHI GLVHSKVPLK EFDHSNCKTE GWADQVDVLD ENSTTRP00000009649/1-427 ISGTGLKDVK AVKHKLQTHI GLVHSKVPLK EFDHSNCKTE GWADQ----- 351 400 ENSP00000360421/1-428 ---------- ---------- ---------- --------IV LQWERVTAEA BACU000247/1-455 ---------- ---------- ---------- ---------- -----ATVSS ENSBTAP00000040839/1-428 ---------- ---------- ---------- --------IV LQWERVTLEA bmy_18831T0/1-452 EPFKEVRLVQ LNEADILRVL AETLVTRIEA IFPDQTMLIV LQWERVTSEA ENSTTRP00000009649/1-427 ---------- ---------- ---------- --------IV LQWERVTSEA 401 450 ENSP00000360421/1-428 VKPRETSEPR AAAQRFYGKR SRAEAPLKCP LADTHMNSSE KLQFYKEKAP BACU000247/1-455 SIGKLIALPS VTLTD--GKR ARTEAPVKCH LADAHMNSSE KLQFYKEKAP ENSBTAP00000040839/1-428 MKPQETLESR TAAQHFYGKR ARTEAPGKYP LTEAHMNSSE KLQFYKEKAA bmy_18831T0/1-452 VKPRETSEPG TAAQHFYGKR ARTEAPVKCL LADAHMNSSE KLQFYKEKAP ENSTTRP00000009649/1-427 VKPRETSEPG TAAQHFYGKR ARTEAPVKCH LADAHMNSSE KLQFY-EKAP 451 500 ENSP00000360421/1-428 DCHGPVLKHE AISSQESKKS KKRPFEESET EQNNSSQPSK QKYVCLAVED BACU000247/1-455 DCHGPLLKHE ALSSQESKKS KKRAFEEPEK EQSNSSQSSK QKYVCLAVED ENSBTAP00000040839/1-428 DCHGPLLKHE ALSSQESKKS KKRAFEEPEK EQGSSSQTSK QKYVCLAVED bmy_18831T0/1-452 DCHGPLLKHE ALSSQESKKS KKRAFEEPEK EQSNSSQSSK QKYMCLAVED ENSTTRP00000009649/1-427 DCHGPLLKHE ALSSQESKKS KKRAFEEPEK EQSNSSQSSK QKYVCLAVEG 501 550 ENSP00000360421/1-428 WDLLNSY BACU000247/1-455 WDLLNSY ENSBTAP00000040839/1-428 WDLLNSY bmy_18831T0/1-452 WDLLNSY ENSTTRP00000009649/1-427 WDLLNSY