KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:51:08 2014 Check: 00 .. Name: ENSTTRP00000016071/1-462 Len: 517 Check: 7236 Weight: 1.00 Name: ENSBTAP00000040876/1-474 Len: 517 Check: 534 Weight: 1.00 Name: bmy_16807T0/1-517 Len: 517 Check: 9910 Weight: 1.00 Name: BACU020512/1-474 Len: 517 Check: 2347 Weight: 1.00 // 1 50 ENSTTRP00000016071/1-462 ---------- ---------- ---------- ---------- ---MAQLEGY ENSBTAP00000040876/1-474 ---------- ---------- ---------- ---------- ---MAQLEGY bmy_16807T0/1-517 MLSSLRLVPP CAPISSPNVK LDFGDLRIPH IFSRTRFLAM RAGMAQLEGY BACU020512/1-474 ---------- ---------- ---------- ---------- ---MAQLEGY 51 100 ENSTTRP00000016071/1-462 YFSAALSCTF LVSCLLFSAF SRALREPYMD EIFHLPQAQR YCEGHFSLSQ ENSBTAP00000040876/1-474 YFSAALSCTF LVSCLLFSAF SRALREPYMD EIFHLPQAQR YCEGHFSLSQ bmy_16807T0/1-517 YFSAALSCTF LVSCLLFSAF SRALREPYMD EIFHLPQAQR YCEGHFSLSQ BACU020512/1-474 YFSAALSCTF LVSCLLFSAF SRALREPYMD EIFHLPQAQR YCEGHFSLSQ 101 150 ENSTTRP00000016071/1-462 WDPMITTLPG LYLLSVGVVK PASWIFGWSE HVVCSIGMLR FVNLLFSVGN ENSBTAP00000040876/1-474 WDPMITTLPG LYLLSVGVVK PASWIFGWSE HVVCSIGMLR FVNLLFSVGN bmy_16807T0/1-517 WDPMITTLPG LYLLSVGVVK PASWIFGWSE HVVCSIGMLR FVNLLFSVGN BACU020512/1-474 WDPMITTLPG LYLLSVGVVK PARWIFGWSE HVVCSIGMLR FVNLLFSVGN 151 200 ENSTTRP00000016071/1-462 FYLLYLLLHK VQPRHKAASS IQRILSTLTL AVFPTLYFFN FLYYTEAGSM ENSBTAP00000040876/1-474 FYLLYLLLRK VQPRHKASSC IQRILSTLTL AIFPTLYFFN FLYYTEAGSM bmy_16807T0/1-517 FYLLYLLLRK VQPRHKAASS IQRILSTLTL AVFPTLYFFN FLYYTEAGSM BACU020512/1-474 FYLLYLLLRK VQPRHKAASS IQRILSTLTL AVFPTLYFFN FLYYTEAGSM 201 250 ENSTTRP00000016071/1-462 FFTLFAYLMC LYGNHKTSAL EGL-GFI--R TNIIRSFFCA GYVGAHKLRE ENSBTAP00000040876/1-474 FFTLFAYLMC LYGNHKTSAL LGFCGFMFRQ TNIIWAIFCA GNVIAQKLTE bmy_16807T0/1-517 FFTLFAYLMC LYGNHKTSAL LGFCGFMFRQ TNIIWAIFCA GNVIAQKLTE BACU020512/1-474 FFTLFAYLMC LYGNHKTSAL LGFCGFMFRQ TNIVWAIFCA GNIIAQKLTE 251 300 ENSTTRP00000016071/1-462 ARKRERQKKN EEKVPSTKGP FSEFRKIAQF LKASKNTSKV LT-------P ENSBTAP00000040876/1-474 AWKTELQKKK EERPTPIKGP FSEFRKILQF LLAYSMSFKN LSMLLLLTWP bmy_16807T0/1-517 AWKTELQKKK EERLSSIKGP FSEFRKILQF LLAYSMSFKN LSMLFLLTWP BACU020512/1-474 AWKTELQKKK EERLPSIKGP FSEFRKILQF LLAYSMSFKN LSMLFLLTWP 301 350 ENSTTRP00000016071/1-462 YI-LMSLFCA -VVVNGGIAI GDRSSHEACL HFPQLFYFFS FTLFFSFPHL ENSBTAP00000040876/1-474 YILLMFLFCA FVAVNGGIVI GDRSSHEACL HFPQLFYFFS FTLFFSFPHL bmy_16807T0/1-517 YILLMFLFCA FVVVNGGIVI GDRSSHEACL HFPQLFYFFS FTLFFSFPHL BACU020512/1-474 YILLMFLFCA FVVVNGGIVI GDRSSHEACL HFPQLFYFFS FTLFFSFPHL 351 400 ENSTTRP00000016071/1-462 LSLKNIRSFL CLVWKRRIQF FVITLVSIFL VWKFTYAHKY LLADNRHYTF ENSBTAP00000040876/1-474 LSLNKIRAFL CLVWKRRIQF FVITLVSIFL VWKFTYAHKY LLADNRHYTF bmy_16807T0/1-517 LSLKKIRSFL CLVWKRRIQF FVITLVSIFL VWKFTYAHKY LLADNRHYTF BACU020512/1-474 LSLKKIRSFL CLVWKRRIQF FVITLVSIFL VWKFTYAHKY LLADNRHYTF 401 450 ENSTTRP00000016071/1-462 YVWKRVFQRY EIVKYLLVPV YIFAGWSIAD SLKSKSIFWN LMLFICLFTV ENSBTAP00000040876/1-474 YVWKRVFQRY EIVKYLLVPV YIFAGWSIAD SLKSKSIFWN LMFFICLFTV bmy_16807T0/1-517 YVWKRVFQRY EIVKYLLVPV YIFAGWSIAD SLKSKSIFWN LMFFICLFTV BACU020512/1-474 YVWKRVFQRY EIVKYLLVPV YIFAGWSIAD SLKSKSIFWN LMFFICLFTV 451 500 ENSTTRP00000016071/1-462 IVPQKLLEFR YFILPYVIYR LNIPLPPTSR LVCELGCYAV VNFLTFYIFL ENSBTAP00000040876/1-474 TVPQKLLEFR YFILPYVIYR LNIPLPPTSR LVCELGCYAV VNFLTFYIFL bmy_16807T0/1-517 IVPQKLLEFR YFILPYVIYR LNIPLPPTSR LVCELGCYAV VNFLTFYIFL BACU020512/1-474 IVPQKLLEFR YFILPYVIYR LNIPLPPTSR LVCELGCYAV VNFLTFYVFL 501 550 ENSTTRP00000016071/1-462 NKTFQWPNSQ DIQRFTW ENSBTAP00000040876/1-474 NKTFQWPNSQ DIQRFMW bmy_16807T0/1-517 NKTFQWPNSQ DIQRFMW BACU020512/1-474 NKTFQWPNSQ DIQRFMW