KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:08 2014 Check: 00 .. Name: ENSP00000383851/1-1094 Len: 1098 Check: 6347 Weight: 1.00 Name: ENSBTAP00000040882/1-1023 Len: 1098 Check: 1457 Weight: 1.00 Name: bmy_11819T0/1-989 Len: 1098 Check: 9173 Weight: 1.00 Name: BACU009630/1-1023 Len: 1098 Check: 571 Weight: 1.00 Name: ENSTTRP00000014201/1-1085 Len: 1098 Check: 5464 Weight: 1.00 // 1 50 ENSP00000383851/1-1094 MAARAPPAAP AAEEPGNPGG PPRRKKSRSG ASGLRRAFSW LRGKRRKKKA ENSBTAP00000040882/1-1023 ---------- ---------- ---------M VVFLGRHLPA LLGLFK-KK- bmy_11819T0/1-989 MYVQVPCALW GLWVPLLQCL CLPRAQIPLG LTFLPPPFPA ---------- BACU009630/1-1023 ---------- ---------- ---------M VVFLGRHLPA LLGLFK-KKA ENSTTRP00000014201/1-1085 MAARAPPAAP AAEEPGGPGG PPRRKKSRSG VSGLRRAISW LRGKRR-KKA 51 100 ENSP00000383851/1-1094 AGAEGAEPAA PRAKKAEDKA KRAKGKGRGS AKAENDKHLS VGPGQGPGSA ENSBTAP00000040882/1-1023 ---------- ---------- --------GS AKAESDKRLS VGPGQGPGSV bmy_11819T0/1-989 ---------- ---------- --------GS AKAESDKRL- ------MGDR BACU009630/1-1023 ---------- ---------- --------GS AKAESDKRLS VGPGQGLGSA ENSTTRP00000014201/1-1085 AGTEGAEPAA PRAKKADDKA RRAKGKGRGS AKAESDKRLS VGPGQGLGSA 101 150 ENSP00000383851/1-1094 VDEHQDNVFF PSGRPPHLEE LHTQAQEGLR SLQHQEKQKL NKGGWDHGDT ENSBTAP00000040882/1-1023 VDDHQDNVFF PTGRPPHLEE LHTQAQEGLR SLQQQEKQKL NKSAWDHGDT bmy_11819T0/1-989 L------TWK SCTRRPRRGS VPS------- ---------- ---------- BACU009630/1-1023 VDEHQDNVFF PSGRPPHLEE LHTQAQEGLR SLQHQEKQKL NKGAWDHGDT ENSTTRP00000014201/1-1085 VDEHQDNVFF PSGRPPHLEE LHTQAQEGLR SLQHQEKQKL NKGTWDHGDT 151 200 ENSP00000383851/1-1094 QSIQSSRTGP DEDNISFCSQ TTSYVAESST AEDALSIRSE MIQRKGSTFR ENSBTAP00000040882/1-1023 QSLQSSRTGP DDDSISFCSQ TTSYTAESST AEDALSIRSE MIQRKGSTFR bmy_11819T0/1-989 -STKSSRTGP DDDSISFCSQ TTSYTAESST AEDALSVRSE MIQRK----- BACU009630/1-1023 QSIQSSRTGP DDDSISFCSQ TTSYTAESST AEDALSVRSE MIQRKGSTFR ENSTTRP00000014201/1-1085 QSIQSSRTGP DDDSISFCSQ TTSYTAESST AEDALSVRSE MIQRKGSTFR 201 250 ENSP00000383851/1-1094 PHDSFPK-SG KSGRRRRERR STVLGLPQHV QKELGLRNER EAPGTPRAPG ENSBTAP00000040882/1-1023 PHDSFPKPSG KSGRRRRERR STVLGLPQHV QKELGLRNER EPPGTPRPPG bmy_11819T0/1-989 ---------- --GRRRRERR STVLGLPQHV QKELGLRNER EAPGTPRPPG BACU009630/1-1023 PHDSFPKSSG KSGRRRRERR STVLGLPQHV QKELGLRNER EAPGTPRPPG ENSTTRP00000014201/1-1085 PHDSFPKSSG KSGHRRRERR STVLGLPQHV QKELGLRNER EAPGTPRPPG 251 300 ENSP00000383851/1-1094 ARDAVRIPTV DGRPRG-TSG MGARVSLQAL EAEAEAGAET EAMLQRHIDR ENSBTAP00000040882/1-1023 PRDAVRIPTV DGRPAGPAAG PGARVSLQAL EAEAEAGA-- EALLQRHIDR bmy_11819T0/1-989 PRDAVRIPTV DGHPAGPASG PGARVSLQAL EAEAEAGAQA EAMLQRHIDR BACU009630/1-1023 PRDAVRIPTV DGHPAGPASG PGARVSLQAL EAEAEAGAQA EAMLQRHIDR ENSTTRP00000014201/1-1085 PRDVVRIPTV DGHPAGPASG PGARVSLQAL EAEAEAGAQA EAMLQRHIDR 301 350 ENSP00000383851/1-1094 VYRDDTFVGR STGTRAPPLT RPMSLAVPGL TGGAGPAEPL SPAMSISPQA ENSBTAP00000040882/1-1023 IYRDDTLFGR STGARPPPLI RPMSLAVPGL TGGAGPPEPL SPAMSISPQA bmy_11819T0/1-989 IYRDDTLVGR STGARPLPLT RPMSLAVPGL TGGAGPPEPL SPAMSISPQA BACU009630/1-1023 IYRDDTLVGR STGARPLPLT RPMSLAVPGL TGGAGPPEPL SPAMSISPQA ENSTTRP00000014201/1-1085 IYRDDTLVGR STGARPLPLT RPMSLAVPGL TGGAGPPEPL SPAMSISPQA 351 400 ENSP00000383851/1-1094 TYLSKLIPHA VLPPTVDVVA LGRCSLRTLS RCSLHSASPA SVRSLGRFSS ENSBTAP00000040882/1-1023 TYLSKLIPHA VLPPTVDVVA LGRCSLRTLS RCSLLSASPA SVRSLGRFSS bmy_11819T0/1-989 TYLSKLIPHA VLPPTVDVVA LGRCSLRTLS RCSLLSASPA SIRSLGHFSS BACU009630/1-1023 TYLSKLIPHA VLPPTVDVVA LGRCSLRTLS RCSLLSASPA SIRSLGHFSS ENSTTRP00000014201/1-1085 TYLSKLIPHA VLPPTVDVVA LGRCSLRTLS RCSLLSSSPA SIRSLGHFSS 401 450 ENSP00000383851/1-1094 VSSPQPRSRH PSSSSDTWSH SQSSDTIVSD GSTLSSKGGS EGQPESSTAS ENSBTAP00000040882/1-1023 VSSPRPRSRH PSSSSDTWSH SQSSETIVSD GSTLSSKGGS EGRPEGSVAN bmy_11819T0/1-989 VSSPRPRSRH PSSSSDTWSH SQSSETIVSD GSTLSSKGGS EGRPEGSVAN BACU009630/1-1023 VSSPRPRSRH PSSSSDTWSH SQSSETIVSD GSTLSSKGGS EGRPEGSVAN ENSTTRP00000014201/1-1085 VSSPRPRSRH PSSSSDTWSH SQSSETIVSD GSTLSSKGGS EGRPESSVAN 451 500 ENSP00000383851/1-1094 NSVVPPPQGG SGRGSPSGGS TAEASDTLSI RSSGQLSGRS VSLRKLKRPP ENSBTAP00000040882/1-1023 SSVAPPPQGG SGRGSPSGGS TAEASDTVSI RSGGQLSGRS VSLRKLKRPP bmy_11819T0/1-989 SNXVPPPLGG SGRGSPSGGS TAEASDTVSI RSGGQLSGRS VSLRKLKRPP BACU009630/1-1023 SNVASPPLGG SGRGSPSGGS TAEASDTVSI RSGGQLSGRS VSLRKLKRPP ENSTTRP00000014201/1-1085 SNVAPPPLGG SGRGSPSGGS TAEASDTVSI RSGGQLSSRS VSLRKLKRPP 501 550 ENSP00000383851/1-1094 PPPRRTHSLH QRGLAVPDGP LGLPPKPERK QQPQLPRPPT T-GGSEGAGA ENSBTAP00000040882/1-1023 PPPRRTHSLH QRSSAVPDGP LGLPPKPERK QQLQPPRPPT T-GGSEGMAA bmy_11819T0/1-989 PPPRRTHSLH QRSSAAHDGP LGLPPKPERK QQQQLPRPPT T-GGSEGMGA BACU009630/1-1023 PPPRRTHSLH QRSSAAHDGP LGLPPKPERK QQQQLPRPPT T-GGSEGMGA ENSTTRP00000014201/1-1085 PPPRRTHSLH QRSSAAHDGP LGLPPKPERK QQQQLPRPPT TGGGSEGMGA 551 600 ENSP00000383851/1-1094 APCPPNPANS WVPGLSPGGS RRPPRSPERT LSPSSGYSSQ SGTPTLPPKG ENSBTAP00000040882/1-1023 PHCPPSSAGG WVSGLSPGGS RRPPRSPERT LSPSSGYSSQ SGTPTLPPKG bmy_11819T0/1-989 APCPSSSAGS WVPGLSPGGS RRPPRSPERT LSPSSGYSSQ SGTPTLPPKG BACU009630/1-1023 APCPSSSAGS WVPGLSPGGS RRPPRSPERT LSPSSGYSSQ SGTPTLPPKG ENSTTRP00000014201/1-1085 APCPSSSAGS WVPGLSPGGS RRPPRSPERT LSPSSGYSSQ SGTPTLPPKG 601 650 ENSP00000383851/1-1094 LAGPPASPGK AQPPKPERVT SLRSPGASVS SSLTSLCSSS SDPAPSDRSG ENSBTAP00000040882/1-1023 LAGAPASPGK AQPPKPERVT SLRSPGASVS SSLTSLCSSS SDPAPSDRSG bmy_11819T0/1-989 LTGAPASPGK AQPPKPERVT SLRSPGASVS SSLTSLCSSS SDPAPSDRSG BACU009630/1-1023 LTGAPASPGK AQPPKPERVT SLRSPGASVS SSLTSLCSSS SDPAPSDRSG ENSTTRP00000014201/1-1085 LTGAPASPGK AQPPKPERVT SLRSPGASVS SSLTSLCSSS SDPVPSDRSG 651 700 ENSP00000383851/1-1094 PQILTPLGDR FVIPPHPKVP APFSPPPSKP RSPNPAAPAL AAPAVVPGPV ENSBTAP00000040882/1-1023 PHMSTALGDR FVIPPHPKVA APFSPPPSKP KSPNQAA--- LAPAVVPGPV bmy_11819T0/1-989 PHMSTALGDR FVIPPHPKVP APFSPPPSKP KSPNQAAPAP AAPAVVPGPI BACU009630/1-1023 PHVSTALGDR FVIPPHPKVP APFSPPPSKP KSPNQAAPAP AAPAVVPGPI ENSTTRP00000014201/1-1085 PHVSTALGDR FVIPPHPKVP APFSPPPSKP KSPNQAAPAP AAPAVVPGPI 701 750 ENSP00000383851/1-1094 STTDASPQSP PTPQTTLTPL QESPVISKDQ SPPPSPPPSY HPPPPPTKKP ENSBTAP00000040882/1-1023 STTAASPESP PTPQTSLTPP QASPAASKDQ SPPPSPPPSY HPPPPPTKKP bmy_11819T0/1-989 STTAASPESP PTPQTSLTPP QASPGASKDQ SPPPSPPPSY HPPPPPTKKP BACU009630/1-1023 PTTAASPESP PTPQTSLTPP QASP----DQ SPPPSPPPSY HPPPPPTKKP ENSTTRP00000014201/1-1085 STTAASPETP PTPQTSLTPP QAAPGASKDQ SPPPSPPPSY HPPPPPTKKP 751 800 ENSP00000383851/1-1094 EVVVEAPSAS ETAEEPLQDP NWPPPPPPAP EEQDLSMADF PPPEEAFFSV ENSBTAP00000040882/1-1023 EVVEGALSAP ETAEELLQDP NWPPPPPPTP EEQDLSMADF PPPEEAFFSV bmy_11819T0/1-989 EVVEEALSAP GTAEEALQDP NWPPPPPPAL EEQDLSMADF PPPEEAFFSV BACU009630/1-1023 EVVEEALSAP GTAEEALQHP HWPPPPPPAP EEQDLSMADF PPPEEAFFSV ENSTTRP00000014201/1-1085 EVVEEALSAP ETAEEALQDP TWPPPPPPAP EEQDLSMADF PPPEEAFFSV 801 850 ENSP00000383851/1-1094 ASPEPAGPSG SPELVSSPAA SSSSATALQI QPPGSPDPPP APPAPAPASS ENSBTAP00000040882/1-1023 ASPEPAGPSP LPE------- ASLPAVSFQN QPSGTPDPPP APPAPPAAGS bmy_11819T0/1-989 AGPEPADPSR PPE------- PSLATVSFQS QPCGTPDLPP ALPAPSAAGS BACU009630/1-1023 AGPEPADPSR PPE------- PSLATVSFQS QPRGTPDLPP ALPAPSAAGS ENSTTRP00000014201/1-1085 AGPEAADPSQ PPE------- PSLATVSFQS QPCGTSDLPP ALPAPSVAGS 851 900 ENSP00000383851/1-1094 APGHVAKLPQ KEPVGCSKGG GPPREDVGAP LVTPSLLQMV RLRSVGAPGG ENSBTAP00000040882/1-1023 VAGLLAKAPR KEPVGCSKGG GLPREDASAP LVTPSLLQTV RLRSVGAPTV bmy_11819T0/1-989 VPGLQAKVPR REPGGCSKGG GLPREDAGAP LVTPSLLQMV RLRSVGTPTV BACU009630/1-1023 VPELQAKVPR REPGGCSKGG GLPREDAGAP LVTPSLLQMV RLRSVGTPTV ENSTTRP00000014201/1-1085 VPGLQAKVPR REPGGCSKGG GLPREDAGAP LVTPSLLQMV RLRSVGTATV 901 950 ENSP00000383851/1-1094 APTPALGPSA PQKPLRRALS GRASPVPAPS SGLHAAVRLK ACSLAASEGL ENSBTAP00000040882/1-1023 TPNPASGPSP PQKPLRRALS GRASPASAAS SGLHAAVRLK ASNLVVSTGP bmy_11819T0/1-989 APTPASGPSA PQKPLRRALS GRASPAPA-S SGLHAAVQLK ASNLAASVGP BACU009630/1-1023 APTPASGPSA PQKPLRRALS GRASPAPA-S SGLHAAVWLK ASSLADSVGP ENSTTRP00000014201/1-1085 APTPASGPSA PQKPLRRALS GRASPAPA-S SGLHAAVRLK ASNLAASVGP 951 1000 ENSP00000383851/1-1094 SSAQPNGPPE AEPRPPQSPA STASFIFSKG SRKLQLERPV SPETQADLQR ENSBTAP00000040882/1-1023 LGAQPNGPPE AEPR---SPA STASFIFSKG TKKLQLERPV SPETQADLQR bmy_11819T0/1-989 VSAQPNGPPE AEPR---SPA STASFIFSKG TKKLQLEQPV SPETQADLQR BACU009630/1-1023 VSAQPNGPPE AEPR---SPA STASFIFSKG TKKLQLEQPV SPETQADLQR ENSTTRP00000014201/1-1085 VSDQPNGPPE AEPR---SPA STASFIFSKG TKKLQLERPV SPETQADLQR 1001 1050 ENSP00000383851/1-1094 NLVAELRSIS EQRPPQAPKK SPKAPPPVAR KPSVGVPPPA SPSYPRAEPL ENSBTAP00000040882/1-1023 NLVAELRSIS EQRPPQAPKK TPKAPPPVAR KPSGGIPLPT SPSFPRAEPL bmy_11819T0/1-989 NLIAELRSIS EQRPPQAPKK PPKAPPPVAR KPSGGAAPPT SPSFPRAEPL BACU009630/1-1023 NLIAELRSIS EQRPPQAPKK PPKAPPPVAR KPSGGAAPPT SPSFPRAEPL ENSTTRP00000014201/1-1085 NLIAELRSVS EQRPPQAPKK PPKAPPPVAR KPSGGVAPPT SPSFPPAEPL 1051 1100 ENSP00000383851/1-1094 TAPPTNGLPH TQDRTKRELA ENGGVLQLVG PEE-KMGLPG SDSQKELA ENSBTAP00000040882/1-1023 TAPPTNGLPH AEDRTKEELA ENGSVLQLVG PDEQKLGPPS TEAEGAFV bmy_11819T0/1-989 PAPPTNGLPH AEDRTKEELA ENGGVLQRVG PEE-KLGLPG TDPQKELV BACU009630/1-1023 PAPPTNGLPH AEDRTKEELA ENGDVLQRVG PEE-KLGLPG TDPQKELV ENSTTRP00000014201/1-1085 PAPPTNGLPH AEDRTKEELA ENGGVLQRVG PEE-KLGLPG TDPQKELV