KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:10 2014 Check: 00 .. Name: ENSP00000386118/1-280 Len: 318 Check: 5923 Weight: 1.00 Name: ENSBTAP00000040896/1-272 Len: 318 Check: 7723 Weight: 1.00 Name: ENSTTRP00000001024/1-273 Len: 318 Check: 3449 Weight: 1.00 Name: bmy_01162T0/1-273 Len: 318 Check: 3465 Weight: 1.00 Name: BACU000858/1-309 Len: 318 Check: 7066 Weight: 1.00 // 1 50 ENSP00000386118/1-280 ---------- ---------- ---------- ------MELG HGAGTTTFTR ENSBTAP00000040896/1-272 ---------- ---------- ---------- ------MELG HRPGTTTLTR ENSTTRP00000001024/1-273 ---------- ---------- ---------- ------MELD HKAGTTTLTR bmy_01162T0/1-273 ---------- ---------- ---------- ------MELD HRAGTTTLTR BACU000858/1-309 MVTGRPVQPS LSFEMTVCIS LSAELSLELP VPEQERMELD HRAGTTTLTR 51 100 ENSP00000386118/1-280 AHLND-KEGQ QDLDPWKAAY SSLDTSKFKN QGLSSPQPLP L-GASAQGSS ENSBTAP00000040896/1-272 AHPNNNKEGQ QDTDPWRAAH SPLDTSKLKY QAPVSVKPSL YRGDSPRSSS ENSTTRP00000001024/1-273 AHLNNSKEGQ QDTDPRRTAR SPLDTSKFKY QLPVSPQPSM YQGHSPRGSS bmy_01162T0/1-273 AHLDNSKEGQ QDTDPWRTAR SPRDTSKFKY QLPVSPQPSM YRGDSPRGSS BACU000858/1-309 AHLNNSKEGQ QDTDPWRTAR SPLDTSKFKY QLPVSPQPSM YRGDSPRGSS 101 150 ENSP00000386118/1-280 LGQCHLKEIP PPPPTAASRD SLGMDPQSRS LKNAGSRSSS RENRATSGEG ENSBTAP00000040896/1-272 LGRASLEEIP PPPPSAVSRG SLWRDSDPES LKKGSFRPSS RESRASLREG ENSTTRP00000001024/1-273 LGQASLEEIR PPSLKAISQD SPQRDSQPGS LKKESYRPSS RERRASFREG bmy_01162T0/1-273 LGQASLEEIR PPPPKAVSRD SPQRSSQPGS LKNESYRPSS RENRASFREV BACU000858/1-309 LGQASLEEIR PPPLKAVSRD SPQRNSQPGS LKKESYRPSS RESRASFQEG 151 200 ENSP00000386118/1-280 AQPCQGTDDG PSLGAQDQRS TPTNQKGSII PNNIRHKFGS NVVDQLVSEE ENSBTAP00000040896/1-272 AQPCQAPKED PNAGAQ---- ---GQSGSSI PNNIRHKFGS NVVDQLVSEE ENSTTRP00000001024/1-273 AQPCQGLEED PNLGAQ---- ---GQSSSSI PNNIRHKFGS NVVDQLISEE bmy_01162T0/1-273 AQPCQGLKED PNLGAQ---- ---GQSSSSI PNNIRHKFGS NVVDQLISEE BACU000858/1-309 AQPCQGLEED PNLGAQ---- ---GQSNSSI PNNIRHKFGS NVVDQLISEE 201 250 ENSP00000386118/1-280 QAQKAIDEVF EGQKRASSWP SRTQNPVEIS SVFSDYYDLG YNMRSNLFRG ENSBTAP00000040896/1-272 QARKAIGEAL EGQKRTSSWP SRIQSPTEIT SIFSDYYDLG YNMRSNLFQG ENSTTRP00000001024/1-273 QAQRAIGEAL EGQKRASSRP SRIQSPTEIT SVFSGYYDLG YNMRSNLFXX bmy_01162T0/1-273 QAQRAIGEDL EGQKRANSWP SRIQRPAEIT SVFSDYYDLG YNMRSNLFQG BACU000858/1-309 QAQRAIGEAL EGQKRASSWP SRIQRPAEIT SVFSDYYDLG YNMRSNLFQG 251 300 ENSP00000386118/1-280 AAEETKSLMK ASYTPEVIEK SVRDLEHWHG RKTDDLGRWH QKNAMNLNLQ ENSBTAP00000040896/1-272 APQETKSLMK ASYTPEVIEK SVRDLEHWHG RKTDDLGRWH QKNAMNMNLQ ENSTTRP00000001024/1-273 APQEMKSLMK ASYTPEVIEK SVRDLQHWHG RKTDDLGRWH RKNAVNMNLQ bmy_01162T0/1-273 APQEMKSLMK ASYTPEVIEK SMRDLEHWHG RKTDDLGRWH QKNAVNMNLQ BACU000858/1-309 APQEMKSLMK ASYTPEVIEK SMRDLEHWHG RKTDDLGRWH QKNAVNMNLQ 301 350 ENSP00000386118/1-280 KALEEKYGEN SKSKSSKY ENSBTAP00000040896/1-272 KALDEK--EK SKNKNSK- ENSTTRP00000001024/1-273 KALDEK--EK SKSKNLKL bmy_01162T0/1-273 KALDEK--EK SKSKNSKF BACU000858/1-309 KALDEK--EK SRSKNSKF