KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:15 2014 Check: 00 .. Name: ENSTTRP00000016070/1-300 Len: 336 Check: 5305 Weight: 1.00 Name: ENSP00000259467/1-301 Len: 336 Check: 3101 Weight: 1.00 Name: ENSBTAP00000040945/1-301 Len: 336 Check: 3823 Weight: 1.00 Name: bmy_19135T0/1-336 Len: 336 Check: 5248 Weight: 1.00 Name: BACU016313/1-301 Len: 336 Check: 3122 Weight: 1.00 // 1 50 ENSTTRP00000016070/1-300 ---------- ---------- ---------- -----MTTLD DKLLGEKLQY ENSP00000259467/1-301 ---------- ---------- ---------- -----MTTLD DKLLGEKLQY ENSBTAP00000040945/1-301 ---------- ---------- ---------- -----MTTLD DKLLGEKLQY bmy_19135T0/1-336 MEYRWEVVEY GWSASLDETV LSPAKSLLCR PLPGTMTTLD DKLLGEKLQY BACU016313/1-301 ---------- ---------- ---------- -----MTTLD DKLLGEKLQY 51 100 ENSTTRP00000016070/1-300 YYSSSEDEDS DHEDKDRGRG ALAGSSMPAD AELAGEGISV NTXXXXXXXX ENSP00000259467/1-301 YYSSSEDEDS DHEDKDRGRC APASSSVPAE AELAGEGISV NTGPKGVIND ENSBTAP00000040945/1-301 YYSSSEEEDS DHEDKDRGRG ALAGSSMPAD ADLAGEGISV NTGPKGVIND bmy_19135T0/1-336 YYSSSEDEES DHEDKDRSRG ALAGSSMPAD AELAGEGISV NTGPKGVIND BACU016313/1-301 YYSSSEDEES DHEDKDRSRG ALAGSSMPAD AELAGEGISV NTGPKGVIND 101 150 ENSTTRP00000016070/1-300 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000259467/1-301 WRRFKQLETE QREEQCREME RLIKKLSMTC RSHLDEEEEQ QKQKDLQEKI ENSBTAP00000040945/1-301 WRRFKQLETE QREEQCREME RLIKKLSLSC RSHLDEEEEQ RKQKDLQEKI bmy_19135T0/1-336 WRRFKQLETE QREEQCREME RLIKKLSVSC RSHLDEEEEQ WKQKGLQEKI BACU016313/1-301 WRRFKQLETE QREEQCREME RLIKKLSVSC RSHLDEEEEQ RKQKGLQEKI 151 200 ENSTTRP00000016070/1-300 XXXMTLKDFA MMNEDQDXXX XXXXYRKQR- EEMRQQLHQG PQFKQVFEIP ENSP00000259467/1-301 SGKMTLKEFA IMNEDQDDEE FLQQYRKQRM EEMRQQLHKG PQFKQVFEIS ENSBTAP00000040945/1-301 SGKMTLKDLA VMNEDQDDEE FLQQYRKQRM EEMRQQLYQG PQFKQVFEIP bmy_19135T0/1-336 SGKMTLKDFA MMNEDQDDEE FLQQYRKQRM EEMRQQLHQG PQFKQVFEIP BACU016313/1-301 SGKMTLKDFA MMNEDQDDEE FLQQYRKQRM EEMRQQLHQG PQFKQVFEIP 201 250 ENSTTRP00000016070/1-300 SGEGFLDMID KEQKSTLIMV HIYEDGIPGT EAMNGCMICL AAEYPAVKFC ENSP00000259467/1-301 SGEGFLDMID KEQKSIVIMV HIYEDGIPGT EAMNGCMICL AAEYPAVKFC ENSBTAP00000040945/1-301 SGEGFLDMID KEQRSTLIMV HIYEDGIPGT EAMNGCMLCL AAEYPAVKFC bmy_19135T0/1-336 SGEGFLDMID KEQKSTLIMV HIYEDGIPGT EAMNGCMICL ASEYPAVKFC BACU016313/1-301 SGEGFLDMID KEQKSTLIMV HIYEDGIPGT EAMNGCMICL AAEYPAVKFC 251 300 ENSTTRP00000016070/1-300 RVKSSVIGAS SRFTRNALPA LLIYKGGELI GNFVRVTDQL GEDFFAVDLE ENSP00000259467/1-301 KVKSSVIGAS SQFTRNALPA LLIYKGGELI GNFVRVTDQL GDDFFAVDLE ENSBTAP00000040945/1-301 RVRSSVIGAS SRFTRNALPA LLIYKGGELI GNFVRVTDQL GEDFFAVDLE bmy_19135T0/1-336 RVKSSVIGAS SRFTRNALPA LLIYKGGELI GNFVRVTDQL GEDFFAVDLE BACU016313/1-301 RVKSSVIGAS SRFTRNALPA LLIYKGGELI GNFVRVTDQL GEDFFAVDLE 301 350 ENSTTRP00000016070/1-300 AFLQEFGLLP EKEVLLVTSV RNSATCHSED SDLEID ENSP00000259467/1-301 AFLQEFGLLP EKEVLVLTSV RNSATCHSED SDLEID ENSBTAP00000040945/1-301 AFLQEFGLLP EKEVLLRTSV RNSATCHSED SDLEID bmy_19135T0/1-336 AFLQEFGLLP EKEVLLLTSV RNSATCHSED SDLEID BACU016313/1-301 AFLQEFGLLP EKEVLLLTSV RNSATCHSED SDLEID