KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:51:15 2014 Check: 00 .. Name: ENSP00000277309/1-316 Len: 316 Check: 7569 Weight: 1.00 Name: ENSBTAP00000040946/1-316 Len: 316 Check: 9835 Weight: 1.00 Name: bmy_19134T0/1-257 Len: 316 Check: 9300 Weight: 1.00 Name: BACU016314/1-215 Len: 316 Check: 1538 Weight: 1.00 // 1 50 ENSP00000277309/1-316 MEAANESSEG ISFVLLGLTT SPGQQRPLFV LFLLLYVASL LGNGLIVAAI ENSBTAP00000040946/1-316 MDAANESSEG SPFILLGLTT NPSQQRPLFM LFLVLYVAGI LGNGLIVAAI bmy_19134T0/1-257 ---------- ---------- ---------- ---------- ---------- BACU016314/1-215 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000277309/1-316 QASPALHAPM YFLLAHLSFA DLCFASVTVP KMLANLLAHD HSISLAGCLT ENSBTAP00000040946/1-316 QASPALYTPM YFLLAHLSFA DLCFTSVTVP KMLANLLAHN RSISLAGCLT bmy_19134T0/1-257 ---------M YFLLARLSFA DLCFTSVTVP KMLANLMAHD CSISLAGCLT BACU016314/1-215 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000277309/1-316 QMYFFFALGV TDSCLLAAMA YDCYVAIRHP LPYATRMSRA MCAALVGMAW ENSBTAP00000040946/1-316 QMYFFFALGV TDSCLLAAMA YDRYVAIRHP LHYATRMSRA MCTALVGTAW bmy_19134T0/1-257 QMYFFFALGV TDSCLLAAMA YDCYVAIRHP LHYATRMSRA VCTALVGTAW BACU016314/1-215 -MYFFFALGV TDSCLLAAMA YDRYVAIRHP LHYATRMSRA VCTALVGTAW 151 200 ENSP00000277309/1-316 LVSHVHSLLY ILLMARLSFC ASHQVPHFFC DHQPLLRLSC SDTHHIQLLI ENSBTAP00000040946/1-316 LVSHVHSLLH ILLMARLSFC ASHQVPHFFC DHQPLLRLSC SDTWHIQLLI bmy_19134T0/1-257 LVSHVHSLLH ILLMAHLSFC ASHQVPHFFC DHQPLLRLSC SDTRHIQLLI BACU016314/1-215 LVSRVHSLLH ILLMANLSFC ASHQVPHFFC DHQPLLRLSC SDTRHIQLLI 201 250 ENSP00000277309/1-316 FTEGAAVVVT PFLLILASYG AIAAAVLQLP SASGRLRAVS TCGSHLAVVS ENSBTAP00000040946/1-316 FTEGAAVVVT PFLLILASYG AIAAAVLRLP SATGRLRAVS TCGSHLAVVG bmy_19134T0/1-257 FTEGAAVVVT LFPLILASCG AIAAAVLQLP SATGKFRAVS TCGSHLAMVG BACU016314/1-215 FTEGAAVVVT PFLLILASCG AIAAAVLRLP SATGKLRAVS TCGSHLAMVG 251 300 ENSP00000277309/1-316 LFYGTVIAVY FQATSRREAE WGRVATVMYT VVTPMLNPII YSLWNRDVQG ENSBTAP00000040946/1-316 LFYGTVIAVY FQPTSRYEAE RGRVATVMYT VVTPMLNPVI YSLRNRDVQG bmy_19134T0/1-257 LFYGTVIAVY FQPMSRYEAE RGRVASVMYT VVTPMLNPVI YSLRNRDVQG BACU016314/1-215 RFYGTVIAVY FQPMSRYEAE RGRVASVMYT VITPMLNPVI YSLRNHDVQG 301 350 ENSP00000277309/1-316 ALRALLIGRR ISASDS ENSBTAP00000040946/1-316 ALRALFTQRR ISGADS bmy_19134T0/1-257 VLRALFTRQR ISAGDS BACU016314/1-215 VLRALFTRQK ISAGDS