KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:16 2014 Check: 00 .. Name: ENSTTRP00000000362/1-376 Len: 434 Check: 415 Weight: 1.00 Name: ENSP00000215637/1-382 Len: 434 Check: 5829 Weight: 1.00 Name: ENSBTAP00000040974/1-424 Len: 434 Check: 4193 Weight: 1.00 Name: bmy_06630T0/1-369 Len: 434 Check: 7490 Weight: 1.00 Name: BACU006552/1-258 Len: 434 Check: 9362 Weight: 1.00 // 1 50 ENSTTRP00000000362/1-376 MEQGLALLLP LFLGLLQLGR A--QVPLEVE PPEPEVAVAV GESLQFPCRL ENSP00000215637/1-382 MDFGLALLLA GLLGLL-LGQ SLQVKPLQVE PPEPVVAVAL GASRQLTCRL ENSBTAP00000040974/1-424 MERGRALLLP LLLGLLQPGR G---GLLEVD PPESQVAMAV GESRNFTCRM bmy_06630T0/1-369 MEQGLALLLP LFLGLLQLGR G---GPLEVE PPEPEVAVAV GESLQFTCRL BACU006552/1-258 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000000362/1-376 ACED-SXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000215637/1-382 ACAD-RGASV QWRGLDTSLG AVQSDTGRSV LTVRNASLSA AGTRVCVGSC ENSBTAP00000040974/1-424 TCADGRAASV VWRGLDTSLG AVQSSAGLSI LYVLNASLSA AGTRVCVGSC bmy_06630T0/1-369 ACEDGRTASV QWRGLDTSLG AVQSGAGSSV LSVLNASLSA AGPRVCVGSC BACU006552/1-258 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000000362/1-376 XXXXXXXXXX XXXXXFPDQL TVAPEALVAG PDQEVSCTAH SVTPAGPDTL ENSP00000215637/1-382 GGRTFQHTVQ LLVYAFPDQL TVSPAALVPG -DPEVACTAH KVTPVDPNAL ENSBTAP00000040974/1-424 GDVNLQHRVR LLLFAFPDQL TVSPEAVVPG RDQEVACTAH NVTPPGPDTL bmy_06630T0/1-369 GDVAFQHIVR LLVFAFPDQL TVAPEALVAG PDQEVACTAH NVTPAGPDAL BACU006552/1-258 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000000362/1-376 SMSLLLGDQE LEGVEAL--- -RDVMEEPQE GEDPLFQVTQ RWLLPTLGTP ENSP00000215637/1-382 SFSLLVGGQE LEGAQALGPE VQEEEEEPQG DEDVLFRVTE RWRLPPLGTP ENSBTAP00000040974/1-424 SMSLLLGDRE LEGVEAL--- -PNVTEEPQE GEDSLFQVTQ RWLLPTSETS bmy_06630T0/1-369 SMSLLLGDQE LEGVEAL--- -RDVMEEPQE GEDPLFQVTQ RWLLPALGTP BACU006552/1-258 -MSLLLGDQE LEGAEAL--- -RDAMEEPQE GEDPLFQVTQ RWLLPSLGTP 201 250 ENSTTRP00000000362/1-376 APPSLHCQAT MRLPGLELSR RRPIPXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000215637/1-382 VPPALYCQAT MRLPGLELSH RQAIPVLHSP TSPEPPDTTS PESPDTTS-- ENSBTAP00000040974/1-424 SLRTLHCQVT MRLPGRELTH HRTIPVLQGL TSPEPPSITS SELPTMTPAK bmy_06630T0/1-369 TPPSLHCQAT MRLPGLELSH RRPIPVLQGL TSLEP----- ---PVMTP-- BACU006552/1-258 TPPSLHCQAT MRLPGLELSH RRPIPVLQGL TSLEP----- ---PVMTP-- 251 300 ENSTTRP00000000362/1-376 X-----XXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000215637/1-382 ------PESP DTTSQEPPDT TSPEPPDKTS PE-PAPQQGS THTPRSPG-- ENSBTAP00000040974/1-424 PSITASPEPT DTTTPESFVM KPPKPPITTS PELASTYSPA SPGPASPGAT bmy_06630T0/1-369 ------PEPS TTESLESPV- TSLKPPVTTS PE-ATPEQAS THSPRSPGPV BACU006552/1-258 ------PEPS TTESPEPPVT TSLKPPVTTS PE-ATPEQAS THSPRSPGPV 301 350 ENSTTRP00000000362/1-376 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXSANSAYLW ENSP00000215637/1-382 ----STRTRR PEISQAGPTQ GEVIPTGSSK PAGDQLPAAL WTSSA----- ENSBTAP00000040974/1-424 SSNSSTRPCL PEIHQSSASG A--LELLCEV PCGPSM-AVR WTQAPGGLEA bmy_06630T0/1-369 PRNSSTRPCR PEIRQLSAAG G--LELLCEV VCGPGV-AVR WTRAPGGLAA BACU006552/1-258 PRNSSTRPCR PEIRQLSAAG G--LEGLCEV VCGPGV-AVR WTQAPGGLAA 351 400 ENSTTRP00000000362/1-376 TGSFVLGLLL LVFLTYRLWK RCR------- ------PPDD LPL------- ENSP00000215637/1-382 ----VLGLLL LALPTYHLWK RCR-----HL AEDDTHPPAS LRLLPQV--- ENSBTAP00000040974/1-424 YETWEAGAQA WLSSRSTLWS GCHPEGWFQC RLDPGGHMAN LYVVPEICSP bmy_06630T0/1-369 YETQEVGAQA WLSGGSVLWA GCHGEGWFQC CLDPGGQTAN LYVASEI--- BACU006552/1-258 YETREVGAQA WLSGGSVLWA RCHSEGWFQC CLDPGGQTAN LYVASEICSP 401 450 ENSTTRP00000000362/1-376 ----PAWTTR RG-------- ---------- ---- ENSP00000215637/1-382 ----SAWAGL RGTGQV---- -------GIS PS-- ENSBTAP00000040974/1-424 TMSAALWTSS LALGLLLLVF LAYHLWKRCQ PTSR bmy_06630T0/1-369 ---------- ---------- ---------- ---- BACU006552/1-258 LMSASLWTGS LVLGLLLLVF LTYRLWKRCR PTR-