KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:19 2014 Check: 00 .. Name: ENSTTRP00000015444/1-971 Len: 976 Check: 4692 Weight: 1.00 Name: ENSP00000360108/1-970 Len: 976 Check: 4243 Weight: 1.00 Name: ENSBTAP00000041032/1-910 Len: 976 Check: 3995 Weight: 1.00 Name: BACU000188/1-913 Len: 976 Check: 6548 Weight: 1.00 Name: bmy_08818T0/1-960 Len: 976 Check: 7831 Weight: 1.00 // 1 50 ENSTTRP00000015444/1-971 MSLLGSYRKK TSNDGYESLQ LVDSNGDLNA GSGGGGGKLR VNAGAAAARS ENSP00000360108/1-970 MSLLGSYRKK TSNDGYESLQ LVDSNGDLSA GSGGVGGKQR VNAG-AAARS ENSBTAP00000041032/1-910 ---------- ---------- ---------- ---------- ---------- BACU000188/1-913 ---------- ---------- ---------- ---------- ---------- bmy_08818T0/1-960 MSLLGSYRKK TSNDGYESLQ LVDSNGDLSA GSGGGGGKLR VNAGAAAARS 51 100 ENSTTRP00000015444/1-971 PARQPQDRAS TMDSSGASSP DMEPSYGGGL FDMVKGGAGR LFSNLKDNLK ENSP00000360108/1-970 PARQPPDRAS TMDSSGASSP DMEPSYGGGL FDMVKGGAGR LFSNLKDNLK ENSBTAP00000041032/1-910 ---------- -MDSSGASSP DMEPSYGGGL FDMVKGGAGR LFSNLKDNLK BACU000188/1-913 --------MK DSENKGASSP DMEPSYGGGL FDMVKGGAGR LFSNLKDNLK bmy_08818T0/1-960 PARQPQDRAS TMDSSGASSP DMEPSYGGGL FDMVKGGAGR LFSNLKDNLK 101 150 ENSTTRP00000015444/1-971 DTLKDTSSRV IQSVTXXXXX XXXXXXXXXX XXXMSFPLDS VDIGFRNQVD ENSP00000360108/1-970 DTLKDTSSRV IQSVTSYTKG DLDFTYVTSR IIVMSFPLDN VDIGFRNQVD ENSBTAP00000041032/1-910 DTLKDTSSRV IQSVTSYTKG DLDFTYVTSR IIVMSFPLDS VDIGFRNQVD BACU000188/1-913 DTLKDTSSRV IQSVTSYTKG DLDFTYVTSR IIVMSFPLDS VDIGFRNQVD bmy_08818T0/1-960 DTLKDTSSRV IQSVTSYTKG DLDFTYVTSR IIVMSFPLDS VDIGFRNQVD 151 200 ENSTTRP00000015444/1-971 DIRSFLDSRH LDHYTVYNLS PKSYRTAKFH SRVSECSWPI RQAPSLHNLF ENSP00000360108/1-970 DIRSFLDSRH LDHYTVYNLS PKSYRTAKFH SRVSECSWPI RQAPSLHNLF ENSBTAP00000041032/1-910 DIRSFLDSRH LDHYTVYNLS PKSYRTAKFH SRVSECSWPI RQAPSLHNLF BACU000188/1-913 DIRSFLDSRH LDHYTVYNLS PKSYRTAKFH SRVSECSWPI RQAPSLHNLF bmy_08818T0/1-960 DIRSFLDSRH LDHYTVYNLS PKSYRTAKFH SRVSECSWPI RQAPSLHNLF 201 250 ENSTTRP00000015444/1-971 AVCRNMYNWL LXXXXXXXXX XXXDGRAASS ILVGAMFIFC NLYSTPGPAV ENSP00000360108/1-970 AVCRNMYNWL LQNPKNVCVV HCLDGRAASS ILVGAMFIFC NLYSTPGPAI ENSBTAP00000041032/1-910 AVCRNMYNWL LQNPKNVCVV HCLDGRAASS ILVGAMFIFC NLYSTPGPAI BACU000188/1-913 AVCRNMYNWL LQNPKNVCVV HCLDGRAASS ILVGAMFIFC NLYSTPGPAV bmy_08818T0/1-960 AVCRNMYNWL LQNPKNVCVV HCLDGRAASS ILVGAMFIFC NLYSTPGPAV 251 300 ENSTTRP00000015444/1-971 RLLYAKRPGI GLSPSHRRYL GYMCDLLADK PYRPHFKPLT IKSITVSPVP ENSP00000360108/1-970 RLLYAKRPGI GLSPSHRRYL GYMCDLLADK PYRPHFKPLT IKSITVSPIP ENSBTAP00000041032/1-910 RLLYAKRPGI GLSPSHRRYL GYMCDLLADK PYRPHFKPLT IKSITVSPVP BACU000188/1-913 RLLYAKRPGI GLSPSHRRYL GYMCDLLADK PYCPHFKPLT IKSITVSPVP bmy_08818T0/1-960 RLLYAKRPGI GLSPSHRRYL GYMCDLLADK PYRPHFKPLT IKSITVSPVP 301 350 ENSTTRP00000015444/1-971 FFNKQRNGCR PYCDVLIXXX XXXXXXXXXX XXXEYRVQDG KIFIPLSITV ENSP00000360108/1-970 FFNKQRNGCR PYCDVLIGET KIYSTCTDFE RMKEYRVQDG KIFIPLNITV ENSBTAP00000041032/1-910 FFNKQRNGCR PYCDVLIGET KIYTTCADFE RMKEYRVQDG KIFIPLSITV BACU000188/1-913 FFNKQRNGCR PYCDVLIGET KIYTTCADFE RMKEYRVQDG KIFIPLSITV bmy_08818T0/1-960 FFNKQRNGCR PYCDVLIGET KIYTTCADFE RMKEYRVQDG KIFIPLSITV 351 400 ENSTTRP00000015444/1-971 QGDVVVSMYH LRSTIGSRLQ AKVTNTQIFQ LQFHTGFIPL DTTVLKFTKP ENSP00000360108/1-970 QGDVVVSMYH LRSTIGSRLQ AKVTNTQIFQ LQFHTGFIPL DTTVLKFTKP ENSBTAP00000041032/1-910 QGDVVVSMYH LRSTIGSRLQ AKVTNTQIFQ LQFHTGFIPL DTTVLKFTKP BACU000188/1-913 QGDVVVSMYH LRSTIGSRLQ AKVTNTQIFQ LQFHTGFIPL DTTVLKFTKP bmy_08818T0/1-960 QGDVVVSMYH LRSTIGSRLQ AKVTNTQIFQ LQFHTGFIPL DTTVLKFTKP 401 450 ENSTTRP00000015444/1-971 ELDACDVPEK YPQLFQVTLD VELQPHDKVI DLTPPWEHYC TKDVNPSILF ENSP00000360108/1-970 ELDACDVPEK YPQLFQVTLD VELQPHDKVI DLTPPWEHYC TKDVNPSILF ENSBTAP00000041032/1-910 ELDACDVPEK YPQLFQVTLD VELQPHDKVM ELTPPWEHYC TKDVNPSILF BACU000188/1-913 ELDACDVPEK YPQLFQVTLD VELQPHDKVI DLTPPWEHYC TKDVNPSILF bmy_08818T0/1-960 ELDACDVPEK YPQLFQVTLD VELQPHDKVI DLTPPWEHYC TKDVNPSILF 451 500 ENSTTRP00000015444/1-971 SSHQEHQDTL VLGGQAPIDI PPDNPRHFGQ GGFFSTLCWQ DQKSEKSFCE ENSP00000360108/1-970 SSHQEHQDTL ALGGQAPIDI PPDNPRHYGQ SGFFASLCWQ DQKSEKSFCE ENSBTAP00000041032/1-910 SSHQEHQDTL VLGGQAPIDI PPDNPRHFGQ GGFFSTLCWQ DQKSEKSFCE BACU000188/1-913 SSHQEHQDTL VLGGQAPIDI PPDNPRHFGQ GGFFSTLCWQ DQKSEKSFCE bmy_08818T0/1-960 SSHQEHQDTL VLGGQAPIDI PPDNPRHFGQ GGFFSTLCWQ DQKSEKSFCE 501 550 ENSTTRP00000015444/1-971 EDHAALVNQE SEQSDDELLT LSSPHGNANG DKPHGARKPS KKQQEPAAPP ENSP00000360108/1-970 EDHAALVNQE SEQSDDELLT LSSPHGNANG DKPHGVKKPS KKQQEPAAPP ENSBTAP00000041032/1-910 EDHAALVNQE SEQSDDELLT LSSPHGNANG DKPHAARKPS KKQQEPAAPA BACU000188/1-913 EDHAALVNQE SEQSDDELLT LSSPHGNANG DKPRGARKPS KKQQEPAAPP bmy_08818T0/1-960 EDHAALVNQE SEQSDDELLT LSSPHGNANG DKPHGARKPS KKQQEPAAPP 551 600 ENSTTRP00000015444/1-971 PTEDVDLLGL EGSAVSKNFS SPAAPPTNSE LLSDLFGGGG AAGPARAGQS ENSP00000360108/1-970 PPEDVDLLGL EGSAMSNSFS PPAAPPTNSE LLSDLFGGGG AAGPTQAGQS ENSBTAP00000041032/1-910 PPEDVDLLGL EGSAVSKNFS SPAAPPSNSE LLSDLFGGGG AAGPVQSGQS BACU000188/1-913 PPEDVDLLGL EGSAVSKNFS SPAAPPTNSE LLSDLFGGGV AAGPARAGQS bmy_08818T0/1-960 PPEDVDLLGL EGSAVSKNFS SPAAPPTNSE LLSDLFGGGG AAGPARAGQS 601 650 ENSTTRP00000015444/1-971 GVDDVFHPSG PTSTQSTPRR STASTSASPT LRVGEGATFD PFGAPAKPSG ENSP00000360108/1-970 GVEDVFHPSG PASTQSTPRR SATSTSASPT LRVGEGATFD PFGAPSKPSG ENSBTAP00000041032/1-910 GVDDVFHPSG PTSTQSTPRR SATSTSASPT LRVGEGATFD PFGAPSKPSG BACU000188/1-913 GVDDVFQPRG PTSTQSTPRR STTSTSASPT LRVGEGATFD PFGAPSKPSG bmy_08818T0/1-960 GVEDVFHPSG PTSTQSTPRR STTSTSASPT LRVGEGATFD PFGAPSKPSG 651 700 ENSTTRP00000015444/1-971 QDLLGSFLNT ASASSDPFLQ PTRSPSPTVH ASSTPAVNIQ PDVSGGWDWH ENSP00000360108/1-970 QDLLGSFLNT SSASSDPFLQ PTRSPSPTVH ASSTPAVNIQ PDVSGGWDWH ENSBTAP00000041032/1-910 QDLLGSFLNT ASASSDPFLQ PTRSPSPTVH ASSTPAVNIQ PDVSGAWDWH BACU000188/1-913 QDLLGSFLNT ASASSDPFLQ PTRSPSPTVH ASSTPAVNIQ PDVSGGWDWN bmy_08818T0/1-960 QDLLGSFLNT ASASSDPFLQ PTRSPSPTVH ASSTPAVNIQ PDVSGGWDWN 701 750 ENSTTRP00000015444/1-971 TKPGGFGMGS KSAATSPTGS LHGTPTHQNK PRTLDPFADL GTL-----GG ENSP00000360108/1-970 AKPGGFGMGS KSAATSPTGS SHGTPTHQSK PQTLDPFADL GTL-----GS ENSBTAP00000041032/1-910 TKPGGFGMGS KSAATSPTGS SHGTPTHQNK PQTLDPFADL GTL-----GG BACU000188/1-913 TKPGGFGMGS KSAAHSPTGS LHGTPTHQNK PQTLDPFADL GTL-----GG bmy_08818T0/1-960 TKPGGFGMGS KSAATSPTGS LHGTPTHQNK PQTLDPFADL GTLGINVAGG 751 800 ENSTTRP00000015444/1-971 SSFASKPSTP TGLGGGFPPL SSPQKASPQP MGGGWQQGSG YSWQQTQSKL ENSP00000360108/1-970 SSFASKPTTP TGLGGGFPPL SSPQKASPQP MGGGWQQGGA YNWQQPQPKP ENSBTAP00000041032/1-910 SSFASKPSTP TGLGGGFPPL SSPQKASPQP MGGGWQQGGG YNWQQTQSKP BACU000188/1-913 SSFASKPSTP TGLGGGFPPL SSPQKASPQP MGGGWQQGGG YSWQQTQSKP bmy_08818T0/1-960 SSFASKPSTP TGLGGGFPPL SSPQKASPQP MGGGWQQGGG YSWQQTQSKP 801 850 ENSTTRP00000015444/1-971 QSSMPHSSPQ NRPNYNVSFS SVPGGQNERG KGAANLEGKQ KAADFEDLLS ENSP00000360108/1-970 QPSMPHSSPQ NRPNYNVSFS AMPGGQNERG KGSSNLEGKQ KAADFEDLLS ENSBTAP00000041032/1-910 QSSMPHSSPQ NRPNYNVSFS SMPGGQNERG KAAANLEGKQ KAADFEDLLS BACU000188/1-913 QSSMPHSSPQ NRPNYNVSFS SAPGGQNERG KGAANLEGKQ KAADFEDLLS bmy_08818T0/1-960 QSSMPHSSPQ NRPNYNVSFS SVPGGQNERG KGAANL---- ---------- 851 900 ENSTTRP00000015444/1-971 GQGFNAHKDK KGPRTIAEMR KEEMAKEMDP EKLKXXXXXX XXXXXXXXXX ENSP00000360108/1-970 GQGFNAHKDK KGPRTIAEMR KEEMAKEMDP EKLKILEWIE GKERNIRALL ENSBTAP00000041032/1-910 GQGFNAHKDK KGPRTIAEMR KEEMAKEMDP EKLKILEWIE GKERNIRALL BACU000188/1-913 GQGFNAHKDK KGPRTIAEMR KEEMAKEMDP EKLKILEWIE GKERNIRALL bmy_08818T0/1-960 --GFNAHKDK KGPRTIAEMR KEEMAKEMDP EKLKILEWIE GKERNIRALL 901 950 ENSTTRP00000015444/1-971 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXATGQPYE ENSP00000360108/1-970 STMHTVLWAG ETKWKPVGMA DLVTPEQVKK VYRKAVLVVH PDKATGQPYE ENSBTAP00000041032/1-910 STMHTVLWAG ETKWKPVGMA DLVTPEQVKK VYRKAVLVVH PDKATGQPYE BACU000188/1-913 STMHTMLWAG ETKWKPVGMA DLVTPEQVKK VYRKAVLVVH PDKATGQPYE bmy_08818T0/1-960 STMHTMLWAG ETKWKPVGMA DLVTPEQVKK VYRKAVLVVH PDKATGQPYE 951 1000 ENSTTRP00000015444/1-971 QYAKMIFMEL NDAWSEFENQ GQKPLY ENSP00000360108/1-970 QYAKMIFMEL NDAWSEFENQ GQKPLY ENSBTAP00000041032/1-910 QYAKMIFMEL NDAWSEFENQ GQKPLY BACU000188/1-913 QYAKMIFMEL NDAWSEFENQ GQKPLY bmy_08818T0/1-960 QYAKMIFMEL NDAWSEFENQ GQKPLY