KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:51:21 2014 Check: 00 .. Name: ENSTTRP00000015010/1-500 Len: 650 Check: 9920 Weight: 1.00 Name: ENSP00000422753/1-622 Len: 650 Check: 9078 Weight: 1.00 Name: ENSBTAP00000041074/1-622 Len: 650 Check: 9054 Weight: 1.00 Name: bmy_08368T0/1-650 Len: 650 Check: 7080 Weight: 1.00 // 1 50 ENSTTRP00000015010/1-500 MEESEPERKR ARTDEATATG SRSEADDEDD EDYVPYVPLR QRRQLLLQKL ENSP00000422753/1-622 MEESEPERKR ARTDEVPAGG SRSEAEDEDD EDYVPYVPLR QRRQLLLQKL ENSBTAP00000041074/1-622 MAESEPERKR ARTDEATATG SRSEAEDEDD EDYVPYVPLR QRRQLLLQKL bmy_08368T0/1-650 MEESEPERKR ARTDEATATG SRSEAEDEDD EDYVPYVPLR QRRQLLLQKL 51 100 ENSTTRP00000015010/1-500 LQRRRKGAAE EEQQDSGSEA RGDEDDIPLG PQSNVSLLDQ HQHLKEKAEA ENSP00000422753/1-622 LQRRRKGAAE EEQQDSGSEP RGDEDDIPLG PQSNVSLLDQ HQHLKEKAEA ENSBTAP00000041074/1-622 LQRRRKGAAE EEQQDSGSEP RGDEDDIPLG PQSNVSLLDQ HQHLKEKAEA bmy_08368T0/1-650 LQRRRKGAAE EEQQDSGSEP RGDEDDIPLG PQSNVSLLDQ HQHLKEKAEA 101 150 ENSTTRP00000015010/1-500 RKESAKEKQL KEEEKILESV AEGRALMSVK EMAKGITYDD PIKTSWTPPR ENSP00000422753/1-622 RKESAKEKQL KEEEKILESV AEGRALMSVK EMAKGITYDD PIKTSWTPPR ENSBTAP00000041074/1-622 RKESAKEKQL KEEEKILESV AEGRALMSVK EMAKGITYDD PIKTSWTPPR bmy_08368T0/1-650 RKESAKEKQL KEEEKILESV AEGRALMSVK EMAKGITYDD PIKTSWTPPR 151 200 ENSTTRP00000015010/1-500 YVLSMSEERH ERVRKKYHIL VEGDGIPPPI KSFKEMKFPA AILRGLKKKG ENSP00000422753/1-622 YVLSMSEERH ERVRKKYHIL VEGDGIPPPI KSFKEMKFPA AILRGLKKKG ENSBTAP00000041074/1-622 YVLSMSEERH ERVRKKYHIL VEGDGIPPPI KSFKEMKFPA AILRGLKKKG bmy_08368T0/1-650 YVLSMSEERH ERVRKKYHIL VEGDGIPPPI KSFKEMKFPA AILRGLKKKG 201 250 ENSTTRP00000015010/1-500 IHHPTPIQIQ GIPTILSGRD MIGIAFTGSG KTLVFTLPVI MFCLEQEKRL ENSP00000422753/1-622 IHHPTPIQIQ GIPTILSGRD MIGIAFTGSG KTLVFTLPVI MFCLEQEKRL ENSBTAP00000041074/1-622 IHHPTPIQIQ GIPTILSGRD MIGIAFTGSG KTLVFTLPVI MFCLEQEKRL bmy_08368T0/1-650 IHHPTPIQIQ GIPTILSGRD MIGIAFTGSG KTLVFTLPVI MFCLEQEKRL 251 300 ENSTTRP00000015010/1-500 PFSKREGPYG LIICPSRELA RQTHGILEYY CRLLQEDSSP LLRCALCIGG ENSP00000422753/1-622 PFSKREGPYG LIICPSRELA RQTHGILEYY CRLLQEDSSP LLRCALCIGG ENSBTAP00000041074/1-622 PFSKREGPYG LIICPSRELA RQTHGILEYY CRLLQEDSSP LLRCALCIGG bmy_08368T0/1-650 PFSKREGPYG LIICPSRELA RQTHGILEYY CRLLQEDSSP LLRCALCIGG 301 350 ENSTTRP00000015010/1-500 MSVKEQMETI RHGVHMMVAT PGRLMDLLQK KMVSLDICRY LALDEADRMI ENSP00000422753/1-622 MSVKEQMETI RHGVHMMVAT PGRLMDLLQK KMVSLDICRY LALDEADRMI ENSBTAP00000041074/1-622 MSVKEQMETI RHGVHMMVAT PGRLMDLLQK KMVSLDICRY LALDEADRMI bmy_08368T0/1-650 MSVKEQMETI RHGVHMMVAT PGRLMDLLQK KMVSLDICRY LALDEADRMI 351 400 ENSTTRP00000015010/1-500 DMGFEGDIRT IFSYFKGQRQ TLLFSATMPK KIQNFAKSAL VKPVTINVGR ENSP00000422753/1-622 DMGFEGDIRT IFSYFKGQRQ TLLFSATMPK KIQNFAKSAL VKPVTINVGR ENSBTAP00000041074/1-622 DMGFEGDIRT IFSYFKGQRQ TLLFSATMPK KIQNFAKSAL VKPVTINVGR bmy_08368T0/1-650 DMGFEGDIRT IFSYFKGQRQ TLLFSATMPK KIQNFAKSAL VKPVTINVGR 401 450 ENSTTRP00000015010/1-500 AGAASLDVIQ EVEYVKEEAK MVYLLECLQK TPPPVLIFAE KKADVDAIHE ENSP00000422753/1-622 AGAASLDVIQ EVEYVKEEAK MVYLLECLQK TPPPVLIFAE KKADVDAIHE ENSBTAP00000041074/1-622 AGAASLDVIQ EVEYVKEEAK MVYLLECLQK TPPPVLIFAE KKADVDAIHE bmy_08368T0/1-650 AGAASLDVIQ EVEYVKEEAK MVYLLECLQK TPPPVLIFAE KKADVDAIHE 451 500 ENSTTRP00000015010/1-500 YLLLKGVEAV AIHGGKDQEE RTKAIEAFRE GKKDIVVATD VASKGLDFPA ENSP00000422753/1-622 YLLLKGVEAV AIHGGKDQEE RTKAIEAFRE GKKDVLVATD VASKGLDFPA ENSBTAP00000041074/1-622 YLLLKGVEAV AIHGGKDQEE RTKAIEAFRE GKKDVLVATD VASKGLDFPA bmy_08368T0/1-650 YLLLKGVEAV AIHGGKDQEE RTKAIEAFRE GKKDVLVATD VASKGLDFPA 501 550 ENSTTRP00000015010/1-500 ---------- ---------- ---------- ---------- ---------- ENSP00000422753/1-622 IQHVINYDMP EEIENY---- ---------- ---------- ----VHRIGR ENSBTAP00000041074/1-622 IQHVINYDMP EEIENY---- ---------- ---------- ----VHRIGR bmy_08368T0/1-650 IQHVINYDMP EEIENYGGLF RGLGLRPTPQ PLGSGPDALF HLSAVHRIGR 551 600 ENSTTRP00000015010/1-500 ---------- ---------- ---------- ---------- ---------- ENSP00000422753/1-622 TGRSGNTGIA TTFINKACDE SVLMDLKALL LEAKQKVPPV LQVLHCGDES ENSBTAP00000041074/1-622 TGRSGNTGIA TTFINKACDE SVLMDLKALL LEAKQKVPPV LQVLHCGDES bmy_08368T0/1-650 TGRSGNTGIA TTFINKACDE SVLMDLKALL LEAKQKVPPV LQVLHCGDES 601 650 ENSTTRP00000015010/1-500 ---------- ---------- ---------- ---------- ---------- ENSP00000422753/1-622 MLDIGGERGC AFCGGLGHRI TDCPKLEAMQ TKQVSNIGRK DYLAHSSMDF ENSBTAP00000041074/1-622 MLEIGGERGC AFCGGLGHRI TDCPKLEAMQ TKQVSNIGRK DYLAHSSMDF bmy_08368T0/1-650 MLDIGGERGC AFCGGLGHRI TDCPKLEAMQ TKQVSNIGRK DYLAHSSMDF