KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:51:22 2014 Check: 00 .. Name: bmy_04206T0/1-312 Len: 376 Check: 6990 Weight: 1.00 Name: ENSBTAP00000041096/1-309 Len: 376 Check: 9835 Weight: 1.00 Name: ENSP00000261245/1-309 Len: 376 Check: 1500 Weight: 1.00 Name: ENSTTRP00000013122/1-309 Len: 376 Check: 1294 Weight: 1.00 // 1 50 bmy_04206T0/1-312 MDDQGCPRCK TTKYRNPSLK LMNTNMIVTV SLKINEGSIN MVQCLCITDL ENSBTAP00000041096/1-309 MDDQGCPRCK TTKYRNPSLK LMVN------ ---------- ----VCGHTL ENSP00000261245/1-309 MDDQGCPRCK TTKYRNPSLK LMVN------ ---------- ----VCGHTL ENSTTRP00000013122/1-309 MDDQGCPRCK TTKYRNPSLK LMVN------ ---------- ----VCGHTL 51 100 bmy_04206T0/1-312 YIFNEPAILI SAPPPNXGTP KQRQTIYRVV ADLNTSLKVM LYFSPYRCES ENSBTAP00000041096/1-309 ---------- ---------- ---------- ---------- -------CES ENSP00000261245/1-309 ---------- ---------- ---------- ---------- -------CES ENSTTRP00000013122/1-309 ---------- ---------- ---------- ---------- -------CES 101 150 bmy_04206T0/1-312 CVDLLFVRGA GNCPECGTPL RKSNFRVQLF EDPTVDKEVE IRKKVLKIYN ENSBTAP00000041096/1-309 CVDLLFVRGA GNCPECGTPL RKSNFRVQLF EDPTVDKEVE IRKKVLKIYN ENSP00000261245/1-309 CVDLLFVRGA GNCPECGTPL RKSNFRVQLF EDPTVDKEVE IRKKVLKIYN ENSTTRP00000013122/1-309 CVDLLFVRGA GNCPECGTPL RKSNFRVQLF EDPTVDKEVE IRKKVLKIYN 151 200 bmy_04206T0/1-312 KREEDFPSLR EYNDFLEEVE EIVFNLTNNV DLDNTKKKME IYQKENKDII ENSBTAP00000041096/1-309 KREEDFPSLR EYNDFLEEVE EIVFNLTNNV DLDNTKKKME IYQKENKDVI ENSP00000261245/1-309 KREEDFPSLR EYNDFLEEVE EIVFNLTNNV DLDNTKKKME IYQKENKDVI ENSTTRP00000013122/1-309 KREEDFPSLR EYNDFLEEVE EIVFNLTNNV DLDNTKKKME IYQKENKDVI 201 250 bmy_04206T0/1-312 QKNKLKLTRE QEELEEALEV ERQENEQRRL FIQKEEQLQQ ILKRKNKQAF ENSBTAP00000041096/1-309 QKNKLKLTRE QEELEEALEV ERQENEQRRL FIQKEEQMQQ ILKRKNKQAF ENSP00000261245/1-309 QKNKLKLTRE QEELEEALEV ERQENEQRRL FIQKEEQLQQ ILKRKNKQAF ENSTTRP00000013122/1-309 QKNKLKLTRE QEELEEALEV ERQENEQRRL FIQKEEQLQQ ILKRKNKQAF 251 300 bmy_04206T0/1-312 LDELESSDLP VALLLAQHKD RSTQLEMQLE KPKPIKPVTF STGIKMVSCI ENSBTAP00000041096/1-309 LDELESSDLP VALLLAQHKD RSTQLEMQIE KPKPIKPGTF STGIKMGQHI ENSP00000261245/1-309 LDELESSDLP VALLLAQHKD RSTQLEMQLE KPKPVKPVTF STGIKMGQHI ENSTTRP00000013122/1-309 LDELESSDLP VALLLAQHKD RSTQLEMQLE KPKPTKPVTF STGIKMGQHI 301 350 bmy_04206T0/1-312 LI-------- ---------- -TC------- ---------- ---------- ENSBTAP00000041096/1-309 SLAPIQKLEE ALYEYQPLQI ETCGPQVPEL EMLGRLGYLN HVRAASPQDL ENSP00000261245/1-309 SLAPIHKLEE ALYEYQPLQI ETYGPHVPEL EMLGRLGYLN HVRAASPQDL ENSTTRP00000013122/1-309 TLPPIQKLEE ALYEYQPLQI ETCGPQVPEL EMLGRLGYLN HVRAASPQDL 351 400 bmy_04206T0/1-312 ---------- ---LEDILQG L----- ENSBTAP00000041096/1-309 AGGYTSSLAC HRALQDAFSG LFWQPS ENSP00000261245/1-309 AGGYTSSLAC HRALQDAFSG LFWQPS ENSTTRP00000013122/1-309 AGGYTSSLAC HRALQDAFSG LFWQPS