KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:51:23 2014 Check: 00 .. Name: ENSP00000360046/1-400 Len: 438 Check: 1418 Weight: 1.00 Name: ENSBTAP00000041118/1-430 Len: 438 Check: 8708 Weight: 1.00 Name: bmy_12442T0/1-310 Len: 438 Check: 6368 Weight: 1.00 Name: ENSTTRP00000008957/1-392 Len: 438 Check: 831 Weight: 1.00 // 1 50 ENSP00000360046/1-400 MAEKILEKLD VLDKQAEIIL ARRTKINRLQ SEGRKTTMAI PLTFDFQLEF ENSBTAP00000041118/1-430 MAERVLDKLD ILDEQAKTLL ATRAKKNCLQ SQVKRKISVI PLTFDFQLEL bmy_12442T0/1-310 ---------- ---------- -----MNTLD AEHAKPFHEL ---------- ENSTTRP00000008957/1-392 MAKKILEKLD ILDEQAKALL AIRAKKNFLQ SEVKKKISVI PLTFDFQLEF 51 100 ENSP00000360046/1-400 EEALATSASK AISKIKEDKS CSITKSKMHV SFKCEPEPRK SNFEKSNLRP ENSBTAP00000041118/1-430 EKDIATSISK TNSKITKDRS YGTKKPKRYV SFKNMPEPKK SDFQNSNLRP bmy_12442T0/1-310 ---------- ----YSQHRQ QQCRRTLGST IFSPVPSIQS NAYKNE---- ENSTTRP00000008957/1-392 EKDIATSISE AESKITKDRS YGIKKTKRYV SFKNMPE-KK SDFEKSNLRP 101 150 ENSP00000360046/1-400 FFIQTNVKNK ESESTAQI-E KKPRKPLDSV GLLEGDRNKR KKSP------ ENSBTAP00000041118/1-430 PFLPTNIKTQ EIKSIEPVEE YLKSRSIRSF HYLKDIPETE YAKPFQELYS bmy_12442T0/1-310 ---------- ---------- ---------- ---KDSIYRI KSPP------ ENSTTRP00000008957/1-392 HFAPT----I KIQIKIPQTE KKPRGSFDLV GHLEDVNKRI KSPP------ 151 200 ENSP00000360046/1-400 ---------- ---------- --------QM NDFNIKENKS VRNYQLSKYR ENSBTAP00000041118/1-430 QHRHQCRRTL CSTVFSSVPS NQSHAYKKED SIYSTKENES IRNDQLNEY- bmy_12442T0/1-310 ---------- ---------- --------EM NDFSTKENKS IRNDQLNEY- ENSTTRP00000008957/1-392 ---------- ---------- --------EM NDFSTKDNKS IRKDQLNEY- 201 250 ENSP00000360046/1-400 SVRKKSLLPL CFEDELKNPH AKIVNVSPTK TVTSHMEQKD TNPIIFHDTE ENSBTAP00000041118/1-430 SVRQKSLLPL CFEDELIKPD AKIIDIGLVK TVTSHTGKND TNPIMFHEAG bmy_12442T0/1-310 SVRKKSLLPL CFEDELKKPN AKIIDVSPAN TATSYMEQND TNPIIFHETG ENSTTRP00000008957/1-392 SVRKKSLPPL CFEDELKKSN AKIIDISPAK TATSYTEEND TNPIIFHETG 251 300 ENSP00000360046/1-400 YVRMLLLTKN RFSSHPLENE NIYPHKRTNF ILERNCEILK SIIGNQSISL ENSBTAP00000041118/1-430 YVQMLLLTKN RLPPHFMKNG NGSPYERSNV VLQRNCEMLK SVARDQSITP bmy_12442T0/1-310 YVQMLLLTKN RLPPHSMENG NGYPYKRSNI VLERNCEMLK SVARGQSITP ENSTTRP00000008957/1-392 YVQMLLLTKN RLPPHSMENG NGYPYKRSNI VLERNCGMLK SVARGQFTTP 301 350 ENSP00000360046/1-400 FKPQKTMPTV QRKDIQIPMS FKAGHTTVDD KLKKKTNKQT LENRSWNTLY ENSBTAP00000041118/1-430 SKTQRTLPTT QKKDIP-AIS FKVSDRVVDD KLRKKTRKQT FENISWDKLY bmy_12442T0/1-310 SKPKRTLPTT QKKAIQ-AVS FEVSRRVVDD KLRKKTSKQT FENISWNKLY ENSTTRP00000008957/1-392 SKPKRTLPTT QKKAIR-AVS FEVSRR-VDD KLRKKTSKQI FENVSWNKLY 351 400 ENSP00000360046/1-400 NFSQNFSSLT KQFVGYLDKA VIHEMSAQTG KFERMFSAGK PTSIPTSSAL ENSBTAP00000041118/1-430 NFSQTFSSLT KKFVGFLDKT VIQEMSAKTG KFEKMFSTVK P--VSEFSAS bmy_12442T0/1-310 NFSQTFSSLT KKFVGFLDKT VIQEMSAKTG KFEKMFSTVK P--MSKLSAS ENSTTRP00000008957/1-392 NFSQTFSSLT KKSVGFLDKT VIQEMSAK-G KFEKTFSTVK T--MSKLSAS 401 450 ENSP00000360046/1-400 PVKCYSKPFK YI---YELNN VTPLDNLLNL SNEILNAS ENSBTAP00000041118/1-430 PFKYYSKPSR NILKVHKINN VTPLDDLLNL SSKK---- bmy_12442T0/1-310 PVKYCSKPSK NILKVHKINN VTPLDDLLNL SSKN---- ENSTTRP00000008957/1-392 PVKYCSKPSK NILKVHKINN VTPLDDLLNL SSKLSTS-