KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:26 2014 Check: 00 .. Name: ENSP00000275820/1-860 Len: 889 Check: 9397 Weight: 1.00 Name: ENSBTAP00000041133/1-847 Len: 889 Check: 1807 Weight: 1.00 Name: BACU000746/1-830 Len: 889 Check: 2419 Weight: 1.00 Name: ENSTTRP00000009194/1-841 Len: 889 Check: 8577 Weight: 1.00 Name: bmy_12873T0/1-800 Len: 889 Check: 118 Weight: 1.00 // 1 50 ENSP00000275820/1-860 MAASRSAGEA GPGGSQGRVV RMKRRGGRGP RRGPAGGGEK ALK-RLKLAV ENSBTAP00000041133/1-847 MAASTGATVP ARGGFRGRMG RGKRGGGRGQ RRGPEGGGEG ALR-RLKLAV BACU000746/1-830 ---------- MQKPFIPQFM N-----ADAP KTCF-----G ILK-RYDSQC ENSTTRP00000009194/1-841 ---------- ASSDCRGHMV SGKRR-GRGP HRCTWGGGEE ALRGRL---A bmy_12873T0/1-800 ---------M ARGKCRA--- ------GRGP RRGPGGGGEG ALK-RLKLAV 51 100 ENSP00000275820/1-860 EEFVHATSEG EAPGGCEGRG APVSFRPGGR KSRKELRKEK RHLRKARRLQ ENSBTAP00000041133/1-847 QEFVRGTAEG GTPGGREGPR VAGRARSGGR KSRRELRREK RHLRKARRLQ BACU000746/1-830 KSLRTVSPGV ARP------- AHPTVKPGS- ---------- -----EHRTG ENSTTRP00000009194/1-841 EEFVQAT-EG ETPVGREGPR AQGRVRPGGR KSRRELRYEK RHLRRARRLQ bmy_12873T0/1-800 EEFVQATSEG ETPGGREGPR AQGGVRPGGR KSRRELRKEK RHLRKARRLQ 101 150 ENSP00000275820/1-860 RTAGPEQG-- PGLGGRSGAE EASGHRQDTE ERARPA---- --PSRDPSP- ENSBTAP00000041133/1-847 RGAGPAQDPR PG------GE ASDPRVGAAR EE-------- -----ADRP- BACU000746/1-830 SPLVPAST-- PGLASPASPT PLAHTRTHTH ASVLPYYLLW ALCCTCVSPC ENSTTRP00000009194/1-841 RTAGPEQGPV PGVGGGGGGG ASAPGR-DAE EDGQPS---- --PRRASRP- bmy_12873T0/1-800 RTAGPSQG-- PGPGGGGAGG ASGPRAEATQ EDGQPS---- --PRRASRP- 151 200 ENSP00000275820/1-860 --------PR KPRPSRVKAK ATAATAKTR- -----PSAAA TAAARKRALL ENSBTAP00000041133/1-847 --------SA GLRRPPAPPK AAPARTQAQG PPGRTKAPAA AAAARKRALL BACU000746/1-830 VIHGLLHVCN QMLKPPVPPQ SAP-FTRTR- --ERTKAPAA AAAARKRALL ENSTTRP00000009194/1-841 --------SE ELRPPPVPAK AA---AQAR- -----PSAAP AAAARKRALL bmy_12873T0/1-800 --------SE GLRPPPVPAK AG--QAQARG PLGRTKAPAA AAAARKRALL 201 250 ENSP00000275820/1-860 AANEEEDREI RKLERCLGLN KRKKK-DGSS SVPLSFARDG LDYILGALES ENSBTAP00000041133/1-847 AANEEEDREI RKLERRLGLN KRRKKGDGSS SVPLSFARDG LDYVLEALGS BACU000746/1-830 AANEEEDREI RKLERCLGLN KRRKKGDG-S SVPPSFSRDG LDYILGALDS ENSTTRP00000009194/1-841 AANEEEDREI RKLERCLGLN KRRKKGDG-S SVPLSFARDG LDYILGALDS bmy_12873T0/1-800 AANEEEDREI RKLERCLGLN KRRKKGDG-S SVPPSFARDG LDYILGALDS 251 300 ENSP00000275820/1-860 GKNSGLYDSS G-EEEEDAGQ TLPESDLESD SQDESEEEEE GDVEKEKKAQ ENSBTAP00000041133/1-847 GESSGLCESG S-EAEEGAGP TPPGSELDTD AEDGWEEQDL ER--SSGQAA BACU000746/1-830 GKSSGWYESS SEEEEEDAGQ TLP----ESD TEDEREEQDV ED--EGEREA ENSTTRP00000009194/1-841 GKSSGWYESS SEEEEEDAGQ ALP----EGG SEDERERQDA ED--EGERAA bmy_12873T0/1-800 GKSSGWYESS SEEEEEDAGQ TLP----ESD PEDEREEQDV ED--EGEREA 301 350 ENSP00000275820/1-860 EAEAQSEDDD EDTEEE---Q GEEKEKGAQE KRRGKRVRFA EDEEKSENSS ENSBTAP00000041133/1-847 E-DAWSEERD QDDAEE---E ARGALGTAKE EGGRKRVRFA EDEERSETPS BACU000746/1-830 EAGAQSEEED QQDVGEGQRE AGGAEGRAKE EGRKKRVRFA EDEERSENPS ENSTTRP00000009194/1-841 DAGAQSEGED PQVAGAGQLE AGGADRRAKE GGRKKRVRFA EDEDRSESSA bmy_12873T0/1-800 EAGAQSEEED QQDVGEGQRE AGGAEGRAKE EGRKKRVRFA EDEERSENPS 351 400 ENSP00000275820/1-860 EDGDITDKSL CGSGEKYIPP HVRQAEETVD FKKKEELERL KKHVKGLLNR ENSBTAP00000041133/1-847 EAVRTDDQSL GENGGKYVPP HVRRVEETED AQKKEELERL KKQVKGLINR BACU000746/1-830 EDVDADDKSL CENGGKYIPP HVRREEETVD AQKKEELERL KKQVKGLINR ENSTTRP00000009194/1-841 EDVDANDKSL CENGGKYIPP HVRREEETVD AQKKEELERL KKQVKGLINR bmy_12873T0/1-800 EDVDANDKSL CENGGKYIPP HVRREEETVD AQKKEELERL KKQVKGLINR 401 450 ENSP00000275820/1-860 LSEPNMASIS GQLEELYMAH SRKDMNDTLT SALMGACVTA SAMPSRLMME ENSBTAP00000041133/1-847 LSEPNLASIS SQLEELYMGH SRKDMNATLT TVVLSACAPD TVMPARLLME BACU000746/1-830 LSEPNLASIS GQLEELYMGH SRKDMNDTLT GVLLSACAPD AAMPARLVME ENSTTRP00000009194/1-841 LSEPNLASIS GQLEELYMGH SRKDMNDTLT GVLLSACAPD TAMPARLVME bmy_12873T0/1-800 LSEPNLAAIS GQLEELYMGH SRKDMNDTLT GVLLSACAPD AAMPSRLVME 451 500 ENSP00000275820/1-860 HVLLVSILHH TVGIEVGAHF LEAVVRKFDA IYKYGSEGKE CDNLFTVIAH ENSBTAP00000041133/1-847 HVLLVSVLHR TVGLEVGAHF LEAVVRRFDD AYKSRRDGKE CDNLFAVIAH BACU000746/1-830 HVLLVSILHC TVGIEVGAHF LEAVVRKFAD VYKSGCDGKE GDNLFAIIAH ENSTTRP00000009194/1-841 HVLLVSILHC TVGIEVGAHF LEAVVRKFAD VYKSGCDGKE CDNLFTIIAH bmy_12873T0/1-800 HVLLVSILHC TVGIEVGAHF LEAVVRKFAD VYKSGCDGKE CDNLFAIIAH 501 550 ENSP00000275820/1-860 LYNFHVVQSL LIFDILKKLI GTFTEKDIEL ILLMLKNVGF SLRKDDALSL ENSBTAP00000041133/1-847 LYNFHVVQSL LIFDVLRKLV ESFTEKDIEL ILLMLKTVGF SLRKDDALSL BACU000746/1-830 LYNFHVVQSL LIFDILRKLI GTFTEKDIEL ILLMLRNVGF SLRKDDALSL ENSTTRP00000009194/1-841 LYNFHVVQSL LIFDILRKLI GTFTEKDIEL ILLMLKNVGF SLRKDDALSL bmy_12873T0/1-800 LYNFHVVQSL LIFDILRKLI GTFTEKDIEL ILLMLRNVGF SLRKDDALSL 551 600 ENSP00000275820/1-860 KELITEAQTK ASGAGSEFQD QTRIRFMLET MLALKNNDMR KIPGYDPEPV ENSBTAP00000041133/1-847 KELITETQAK ASGAGGRFRD QTRVRFMLET LLALKNNDVR KIPGYDPEPV BACU000746/1-830 KELITEAQAK ASGAGGRFRD QSRVRFMLET LLALKNNDMR KIPGYDPEPL ENSTTRP00000009194/1-841 KELITEAQAK ASGAGGKFRD QTRVRFMLET LLALKNNDVR KIPGYDPEPL bmy_12873T0/1-800 KELITEAQAK ASGAGGKFRD QTRVRFMLET LLALKNNDVR KIPGYDPEPL 601 650 ENSP00000275820/1-860 EKLRKLQRAL VRNAGSGSET QLRVSWDSVL SAEQTGRWWI VGSAWSGAPM ENSBTAP00000041133/1-847 ERLRKLQRGL VRGAGAGTDP ELRVSWDSVL NAERTGRWWI VGSAWSGAPM BACU000746/1-830 ERLRKLQRAL LRGAGSGTET QLRVSWDSVL NAERTGRWWI VGSAWSGAPM ENSTTRP00000009194/1-841 ERLRKLQRAL LRGAGSGTET QLRVSWDSIL NAERTGRWWI VGSAWSGAPM bmy_12873T0/1-800 ERLRKLQRAL LRGAGSGTET QLRVSWDSVL NAQRTGRWWI VGSAWSGAPM 651 700 ENSP00000275820/1-860 IDNSHHTHLQ KQLVGTVSSK ILELARKQRM NTDIRRNIFC TIMTSEDFLD ENSBTAP00000041133/1-847 VDGGPQKAPQ KPLAGTVSSK ILELARKQRM NTDVRRNIFC TVMTSEDFLD BACU000746/1-830 IDSSQQKTPQ KQLTGTVSSK ILELARKQRM NTDIRRNIFC TVMTSEDFLD ENSTTRP00000009194/1-841 IDSGQQKTPR KQLTGTVSSK ILELARKQRM NTDIRRNIFC TVMTSEDFLD bmy_12873T0/1-800 IDSGQQKTPQ KQLTGTVSSK ILELARKQRM NTDIRRNIFC TVMTSEDFLD 701 750 ENSP00000275820/1-860 AFEKLLKLGL KDQQEREIIH VLMDCCLQEK TYNPFYAFLA SKFCEYERRF ENSBTAP00000041133/1-847 AFEKLLKLGL KDQQEREIVH VLVDCCLQEK TYNPFYAFLA GKFCAYERRF BACU000746/1-830 AFEKLLKLGL KDQQEREIVH VLVDCCLQEK TYNPFYAFLA GKFCDYARSF ENSTTRP00000009194/1-841 AFEKLLKLGL KDQQEREIVH VLIDCCLQER TYNPFYAFLA GKFCDYARSF bmy_12873T0/1-800 AFEKLLKLGL KDQQEREIVH VLVDCCLQEK TYNPFYAFLA GKFCDYARSF 751 800 ENSP00000275820/1-860 QMTFQFSIWD KFRDLENLPA TNFSNLVHLV AHLLKTKSLS LSILKVVEFS ENSBTAP00000041133/1-847 QMTFQFSIWD KFRDLENLSA TSFANLVHLV AHLLKTKSLP LSLLKVVEFS BACU000746/1-830 QMTFQFSIWD KFRDLETLPA TNFSNLVHLV AHLLKTKSLP LSILKVVEFS ENSTTRP00000009194/1-841 QMTFQFSIWD KFRDLETLPA TNFSNLVHLV AHLLKTKSLP LSILKVVEFS bmy_12873T0/1-800 Q--------- ---------- ---------- ---------- -----VIEFS 801 850 ENSP00000275820/1-860 ELDKPRVRFL RKVLSILLME TEVEDLSLIF TRVSDNPKLG VLREGLKLFI ENSBTAP00000041133/1-847 ELDKPRVHFL RKVLHILLME TEVEDLGLIF ARVSDKPALG LLREGLKLFI BACU000746/1-830 ELDKPRVHFL RKVLHMLLME TEVEDLGLIF ARVSDSPALG LLREGLKLFI ENSTTRP00000009194/1-841 ELDKPRVHFL RKVLHMLLME TEVEDLGLIF GRVSDSPALG LLREGLKLFI bmy_12873T0/1-800 ELDKPRVHFL RKVLHMLLME TEVEDLGLIF ARVSDSPALG LLREGLKLFI 851 900 ENSP00000275820/1-860 SHFLLKNAQA HRSADEANVL REKADLATKC LQGKASLRM ENSBTAP00000041133/1-847 SHFLLR---- --GAPEAGAL RERAELCTQA LQGRGSLRM BACU000746/1-830 SHF--KGGQA PGGAEEASAL RERAELCAGA LQGRASLRP ENSTTRP00000009194/1-841 SHFLLKGGQA HGGAKEASAL RERAELAPG- LQGRASLRP bmy_12873T0/1-800 SHFLLKGGQA HGGAEEASAL RERAELCAGA LQGRASLRP