KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:28 2014 Check: 00 .. Name: ENSP00000420659/1-875 Len: 931 Check: 2206 Weight: 1.00 Name: ENSBTAP00000041165/1-875 Len: 931 Check: 116 Weight: 1.00 Name: ENSTTRP00000013125/1-654 Len: 931 Check: 607 Weight: 1.00 Name: BACU010237/1-539 Len: 931 Check: 1723 Weight: 1.00 Name: bmy_05495T0/1-732 Len: 931 Check: 3400 Weight: 1.00 // 1 50 ENSP00000420659/1-875 MSRHHSRFER DYRVGWDRRE WSVNGTHGTT SICSVTSGAG GGTASSLSVR ENSBTAP00000041165/1-875 MSRHHSRFER DYRVGWDRRE WSANGTHGTT SICSATAGAG GSSASSLSAR ENSTTRP00000013125/1-654 ---------- ---------- ---------- ---------- ---------- BACU010237/1-539 ---------- ---------- ---------- ---------- ---------- bmy_05495T0/1-732 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000420659/1-875 PGLLPLPVVP SRLPTPATAP APCTTGSSEA ITSLVASSAS AVTTKAPGIS ENSBTAP00000041165/1-875 PGLLPLPVVP SRLPTPATAP TPCTTGSGEA ITSLVASSAP ATTTKAPGIS ENSTTRP00000013125/1-654 ---------- ---------- ---------- ---------- ---------- BACU010237/1-539 ---------- ---------- ---------- ---------- ---------- bmy_05495T0/1-732 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000420659/1-875 KGDSQSQGLA TSIRWGQTPI NQSTPWDTDE PPSKQMRESD NPGTGPWVTT ENSBTAP00000041165/1-875 KADNQSQGLT TSIRWGQTPI NQSTPWDTDE PPSKQMRESD NPGTGPWVTT ENSTTRP00000013125/1-654 ---------- ---------- ---------- ---------- ---------- BACU010237/1-539 ---------- ---------- ---------- ---------- ---------- bmy_05495T0/1-732 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000420659/1-875 VAAGNQPTLI AHSYGVAQPP TFSPAVNVQA PVIGVTPSLP PHVGPQLPLM ENSBTAP00000041165/1-875 VAAGSQPALI SHSYGVAQPP TFSPAVNVQA PVIGVTPSLP PHVGPQLPLM ENSTTRP00000013125/1-654 ---------- ---------- ---------- ---------- ---------- BACU010237/1-539 ---------- ---------- ---------- ---------- ---------M bmy_05495T0/1-732 ---------- ---------- ---------- ---------- ---------M 201 250 ENSP00000420659/1-875 PGHYSLPQPP SQPLSSVVVN MPAQALYASP QPLAVSTLPG VGQVARPGPT ENSBTAP00000041165/1-875 PGHYSLPQPP SQPLSSVVVN MPAQALYASP QPLAVSTLPG VGQVARPGPT ENSTTRP00000013125/1-654 ---------- ---------- MPAQALYASP QPLAVSTLPG VGQVARPGPT BACU010237/1-539 PGHYSLPQPP SQPLSSVVVN MPAQALYASP QPLAVSTLPG VGQVARPGPT bmy_05495T0/1-732 PGHYSLPQPP SQPLSSVVVN MPAQALYASP QPLAVSTLPG VGQVARPGPT 251 300 ENSP00000420659/1-875 AVGNGHMAGP LLPPPPPAQP SATLPSGAPA TNGPPTTDSA HGLQMLRTIG ENSBTAP00000041165/1-875 AVGNGHMAGP LLPPPLPAQP SATLPSVAPA TNGPPTSESA HGLQMLRTIG ENSTTRP00000013125/1-654 TVGNGHMAGP LLPPPPPAQP SATLPSGAPT TNGPPTSDSA HGLQMLRTIG BACU010237/1-539 TVGNGHMAGP LLPPPPPAQP SATLPGGAPA TNGPPTSDSA HGLQMLRTIG bmy_05495T0/1-732 TVGNGHMAGP LLPPPPPAQP SATLPSGAPA TNGPPTSDSA HGLQMLRTIG 301 350 ENSP00000420659/1-875 VGKYEFTDPG HPR------- ---------- ---------- ---------- ENSBTAP00000041165/1-875 VGKYEFTDPG HPK------- ---------- ---------- ---------- ENSTTRP00000013125/1-654 VGKYEFTDPG HPK------- ---------- ---------- ---------- BACU010237/1-539 VGKYEFTDPG HPK------- ---------- ---------- -APTPDPSSQ bmy_05495T0/1-732 VGKYEFTDPG HPKGFNLIIL LWPSDHRTGM VWLIYCPGSS AAPTPDPSSQ 351 400 ENSP00000420659/1-875 -------EML KELNQQRRAK AFTDLKIVVE GREFEVHQNV LASCSLYFKD ENSBTAP00000041165/1-875 -------EML KELNQQRRVK AFTDLKIVVE GREFEVHQNV LASCSLYFKD ENSTTRP00000013125/1-654 -------EML KELNQQRRAK AFTDLKIVVE GREFEVHQNV LASCSLYFKD BACU010237/1-539 PCALQLEEML KELNQQRRAK AFTDLKIVVE GREFEVHQNV LASCSLYFKD bmy_05495T0/1-732 PCALHLEEML KELNQQRRAK AFTDLKIVVE GREFEVHQNV LASCSLYFKD 401 450 ENSP00000420659/1-875 LIQ------- -----RSVQD SGQGGREKLE LVLSNLQADV LELLLEFVYT ENSBTAP00000041165/1-875 LIQ------- -----RSVQD GSQCGREKLE LVLSNLQADV LELLLEFVYT ENSTTRP00000013125/1-654 LIQ------- -----RSVQD GSQCGREKLE LVLSNLQADV LELLLEFVYT BACU010237/1-539 LIQ------- -----RSVQD GSQCGREKLE LVLSNLQADV LELLLEFVYT bmy_05495T0/1-732 LIQRAAGKDT LVSVPRSVQD GSQCGREKLE LVLSNLQADV LELLLEFVYT 451 500 ENSP00000420659/1-875 GSLVIDSANA KTLLEAASKF QFHTFCKVCV SFLEKQLTAS NCLGVLAMAE ENSBTAP00000041165/1-875 GSLVIDSANA KTLLEAASKF QFHTFCKVCV SFLEKQLTAS NCLGVLAMAE ENSTTRP00000013125/1-654 GSLVIDSANA KTLLEAASKF QFHTFCKVCV SFLEKQLTAS NCLGVLAMAE BACU010237/1-539 GSLVIDSANA KTLLEAASKF QFHTFCKVCV SFL------- ---------- bmy_05495T0/1-732 GSLVIDSANA KTLLEAASKF QFHTFCKVCV SFLEKQLTAS NCLGVLAMAE 501 550 ENSP00000420659/1-875 AMQCSELYHM AKAFALQIFP EVAAQEEILS ISKDDFIAYV SNDSLNTKAE ENSBTAP00000041165/1-875 AMQCSELYHM AKAFALQIFP EVAAQEEILS ISKDDFIAYI SNDSLNTKAE ENSTTRP00000013125/1-654 AMQCSELYHM AKAFALQIFP EVATQEEILN ISKDDFIAYI ANDSLNTKAE BACU010237/1-539 ---------- ---------- ---------- ---------- ---------- bmy_05495T0/1-732 AMQCSELYHM AKAFALQIFP EVATQEEILN ISKDDFIAYI ANDSLNTKAE 551 600 ENSP00000420659/1-875 ELVYETVIKW IKKDPATRTQ YAAELLAVVR LPFIHPSYLL NVVDNEELIK ENSBTAP00000041165/1-875 ELVYETVIKW IKKDPVSRAQ YAAELLAVVR LPFIHPSYLL NVVDNEELIK ENSTTRP00000013125/1-654 ELVYETVIKW IKKDPVSRAQ YSAELLAVVR LPFIHPSYLL NVVDNEELIK BACU010237/1-539 ---------- ---------- ---------- ---------- ---------- bmy_05495T0/1-732 ELVYETVIKW IKKDPVSRAQ YSAELLAVVR LPFIHPSYLL NVVDNEELIK 601 650 ENSP00000420659/1-875 SSEACRDLVN EAKRYHMLPH ARQEMQTPRT RPRLSAGVAE VIVLVGGRQM ENSBTAP00000041165/1-875 SSEACRDLVN EAKRYHMLPH ARQEMQTPRT RPRLSAGVAE VIVLVGGRQM ENSTTRP00000013125/1-654 SSEACRDLVN EAKRYHMLPH ARQEMQTPRT RPRLSAGVAE VIVLVGGRQM BACU010237/1-539 ---------- ---------- ---------- ------GVAE VIVLVGGRQM bmy_05495T0/1-732 SSEACRDLVN EAKRYHMLPH ARQEMQTPRT RPRLSAGVAE VIVLVGGRQM 651 700 ENSP00000420659/1-875 VGMTQRSLVA VTCWNPQNNK WYPLASLPFY DREFFSVVSA GDNIYLSGGM ENSBTAP00000041165/1-875 VGMTQRSLVA VTCWNPQNNK WYPLASLPFY DREFFSVVSA GDNIYLSGGM ENSTTRP00000013125/1-654 VGMTQRSLVA VTCWNPQNNK WYPLASLPFY DREFFSVVSA GDNIYLSGGM BACU010237/1-539 VGMTQRSLVA VTCWNPQNNK WYPLASLPFY DREFFSVVSA GDNIYLSGGM bmy_05495T0/1-732 VGMTQRSLVA VTCWNPQNNK WYPLASLPFY DREFFSVVSA GDNIYLSGGM 701 750 ENSP00000420659/1-875 ESGVTLADVW CYMSLLDNWN LVSRMTVPRC RHNSLVYDGK IYTLGGLGVA ENSBTAP00000041165/1-875 ESGVTLADVW CYMSLLDNWN LVSRMTVPRC RHNSLVYDGK IYTLGGLGVA ENSTTRP00000013125/1-654 ESGVTLADVW CYMSLLDNWN LVSRMTVPRC RHNSLVYDGK IYTLGGLGVA BACU010237/1-539 ESGVTLADVW CYMSLLDNWN LVSRMTVPRC RHNSLVYDGK IYTLGGLGVA bmy_05495T0/1-732 ESGVTLADVW CYMSLLDNWN LVSRMTVPRC RHNSLVYDGK IYTLGGLGVA 751 800 ENSP00000420659/1-875 GNVDHVERYD TITNQWEAVA PLPKAVHSAA ATVCGGKIYV FGGVNEAGRA ENSBTAP00000041165/1-875 GNVDHVERYD TITNQWEAVA PLPKAVHSAA ATVCGGKIYV FGGVNEAGRA ENSTTRP00000013125/1-654 GNVDHVERYD TITNQWEAV- PLPKAVHSAA ATVCGGKIYV FGGVNEAGRA BACU010237/1-539 GNVDHVERYD TITNQWEAVA PLPKAVHSAA ATVCGGKIYV FGGVNEAGRA bmy_05495T0/1-732 GNVDHVERYD TITNQWEAVA PLPKAVHSAA ATVCGGKIYV FGGVNEAGRA 801 850 ENSP00000420659/1-875 AGVLQSYVPQ TNTWSFIESP MIDNKYAPAV TLNGFVFILG GAYARATTIY ENSBTAP00000041165/1-875 AGVLQSYVPQ TNTWSFIESP MIDNKYAPAV TLNGFVFILG GAYARATTIY ENSTTRP00000013125/1-654 AGVLQSYVPQ SNTWSFIESP MIDNKYAPAV TLNGFVFILG GAYARATTIY BACU010237/1-539 AGVLQSYVPQ TNTWSFIESP MIDNKYAPAV TLNGFVFILG GAYARATTIY bmy_05495T0/1-732 AGVLQSYVPQ TNTWSFIESP MIDNKYAPAV TLNGFVFILG GAYARATTIY 851 900 ENSP00000420659/1-875 DPEKGNIKAG PNMNHSRQFC SAVVLDGKIY ATGGIVSSEG PALGNMEAYE ENSBTAP00000041165/1-875 DPDKGNIKAG PNMNHSRQFC SAVVLDGKIY ATGGIVSSEG PALGNMEAYE ENSTTRP00000013125/1-654 DPDKGNIKAG PNMNHSRQFC SAVVLDGKIY ATGGIVSSEG PALGNMEAYE BACU010237/1-539 DPDKGNIKAG PNMNHSRQFC SAVVLDGKIY ATGGIVSSEG PALGNMEAYE bmy_05495T0/1-732 DPDKGNIKAG PNMNHSRQFC SAVVLDGKIY ATGGIVSSEG PALGNMEAYE 901 950 ENSP00000420659/1-875 PTTNTWTLLP HMPCPVFRHG CVVIKKYIQS G ENSBTAP00000041165/1-875 PATNTWTLLP HMPCPVFRHG CVVIKKYIQS G ENSTTRP00000013125/1-654 PATNTWALLP HMPCPVFRHG CVVIKKYIQS G BACU010237/1-539 PATNTWALLP HMPCPVFRHG CVVIKKYIQS G bmy_05495T0/1-732 PATNTWALLP HMPCPVFRHG CVVIKKYIQS G