KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:30 2014 Check: 00 .. Name: ENSP00000245923/1-545 Len: 692 Check: 8170 Weight: 1.00 Name: ENSTTRP00000007878/1-544 Len: 692 Check: 478 Weight: 1.00 Name: ENSBTAP00000041194/1-541 Len: 692 Check: 6296 Weight: 1.00 Name: bmy_15600T0/1-433 Len: 692 Check: 5577 Weight: 1.00 Name: BACU002114/1-506 Len: 692 Check: 6581 Weight: 1.00 // 1 50 ENSP00000245923/1-545 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007878/1-544 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000041194/1-541 ---------- ---------- ---------- ---------- ---------- bmy_15600T0/1-433 RKATPHHHPP GCFPSPSPSL RFRPPFSGPA PGPRAAVAPQ RPRPPPLSRT BACU002114/1-506 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000245923/1-545 ---------- ---------- -MGQVL---- ---------- --PVFA---- ENSTTRP00000007878/1-544 ---------- ---------- -MGQVL---- ---------- --PVFA---- ENSBTAP00000041194/1-541 ---------- ---------- -MGQVL---- ---------- --PVFA---- bmy_15600T0/1-433 EGGGGGGGCW SGPGGGGSED GGGGVLGAAE MSARGPRPRA AWPEWAGVPM BACU002114/1-506 ---------- ---------- -MGQVL---- ---------- --PVFA---- 101 150 ENSP00000245923/1-545 ---------H CKEAPSTA-- ------SSTP DSTEGGNDDS DFRELHTARE ENSTTRP00000007878/1-544 ---------H CKEAPSTA-- ------SSTP DSTEGGNDDS DFRELHTARE ENSBTAP00000041194/1-541 ---------H CKEAPSTA-- ------SSTP DSTEGGNDDS DFRELHTARE bmy_15600T0/1-433 QARGGPWGRS CRSSPTAKKL RLQLPLPLTP QKMAGGNDDS DFRELHTARE BACU002114/1-506 ---------H CKEAPSTA-- ------SSTP DSTEGGNDDS DFRELHTARE 151 200 ENSP00000245923/1-545 FSEEDEEETT SQDWGTPREL TFSYIAFDGV VGSGGRRDST ARRPRPQGRS ENSTTRP00000007878/1-544 ISEEDEEEST SQDWGTPREL TFSYIAFDGV LGSGARRDSA ARRPRPQGRS ENSBTAP00000041194/1-541 FSEDDEEETT SQDWGTPREL TFSYIAFDGV VGSGARRDSA ARRPRPQGRS bmy_15600T0/1-433 FSEEDEEETT SQDWGTPREL TFSYIAFDGV LGSGARRDSA ARRPRPQGRS BACU002114/1-506 FSEEDEEETT SQDWGTPREL TFSYIAFDGV LGSGARRDSA ARRPRPQGRS 201 250 ENSP00000245923/1-545 VSEPRDQHPQ PSLGDSLESI PSLSQSPEPG RRGDPDTAPP SERPLEDLRL ENSTTRP00000007878/1-544 VSEPREPPPQ PGLGDSLESI PSLSQSPEPG RRGHPDSAPP AERPLEDLGL ENSBTAP00000041194/1-541 VSEPRDPPPQ PGLGDSLESI PSLSQSPEPG RRGDPSSAPP AERPPEDLGL bmy_15600T0/1-433 VSEPREPPPQ PGLGDSLESI PSLSQSPEPG RRGHPDSAPP AERPLEDLGL BACU002114/1-506 VSEPREPPPQ PGLGDSLESI PSLSQSPEPG RRGHPDSAPP AERPLEDLGL 251 300 ENSP00000245923/1-545 RLDHLGWVAR GTGSGEDSST SSSTPLEDEE PQEPNRLETG EAGE------ ENSTTRP00000007878/1-544 QMDQVGWAAR GAGSGEDSAT SSSTPLDDEE PDGS---EVG EAGK------ ENSBTAP00000041194/1-541 QLDQLGWATR GAGTGEDSAT SSSTPLEDEE PEGS---VAG EAGK------ bmy_15600T0/1-433 QLDQLGWAAR GAGSGEDSAT SSSTPLDDEE PDGS---EVG EAGKGEMSEV BACU002114/1-506 QLDQLGWAAR GAGSGEDSAT SSSTPLDDEE PDGS---EVG EAGKGEMSEV 301 350 ENSP00000245923/1-545 ---------- ---------- ---------E LDLRLRLAQP SSPEVLTPQL ENSTTRP00000007878/1-544 ---------- ---------- ---------E LDLQLGLAQS SLPEVLTPQP ENSBTAP00000041194/1-541 ---------- ---------- ---------E LDLPLAFVQS SPLEVFTPQP bmy_15600T0/1-433 LGPKPPGVGG LSLGHLHGES SQPSLSNAPD LDLQLGLAQS SPPEVLTPQP BACU002114/1-506 LGPKPPGVGG LSLGHLHGES SQPSLSNAPD LDLQLGLAQS SPPEVLTPQP 351 400 ENSP00000245923/1-545 SPGSGTPQAG TPSPSRSRDS NSGPEEPLLE E--EEKQWGP LEREPVRGQC ENSTTRP00000007878/1-544 SPGSGIPQAR TPSPHRSRDS NSWPDEPSLD KKEEEEPWGG LEREPITGQC ENSBTAP00000041194/1-541 SPVSGIPQTP TPSPPRSRDS NSWLDEPLPD EK-EEEPWGQ LEREPITGQC bmy_15600T0/1-433 SPGSGIPQAR TPSPLRSRDS NSWPDEPSLD EKEEEEPWGR LEREPITGQC BACU002114/1-506 SPGSGIPQAH TPSPLRSRDS NSWPDEPSLD EKEEEEPWGR LEREPITGQC 401 450 ENSP00000245923/1-545 LDSTDQLEFT VEPRLLGTAM EWLKTSLLLA VYKTV-PILE LSPPLWTAIG ENSTTRP00000007878/1-544 LDSTDQSEFT LEPHFLGTVP IGRLTSLLWA VYKESHPVLE LFPPQWRVIG ENSBTAP00000041194/1-541 LASTDQSEFT LESQVLGKLR EGQIPEKALL NVATR---LV KFPPLWRAIG bmy_15600T0/1-433 LDSTDQSEFT LEPHFLGK-- ---------- ---------- ---------- BACU002114/1-506 LDSTDQSEFT LEPHFL---- ---------- ---------- ---------- 451 500 ENSP00000245923/1-545 WVQRGPTPPT PVLRVLLKWA KSPRSSGVPS LSL-GADMGS KVADLLYWKD ENSTTRP00000007878/1-544 WVQRGP-PLT PSLRVPLKWA KSLRSSSVCS LSL-GAEMGS KXXXXXXXXX ENSBTAP00000041194/1-541 WVQRGP-PPI PSLPVPLKWA KSLRSSGVCS LSLGGAEMGS KVVDLLHWKD bmy_15600T0/1-433 ---------- ---------- ---------- ---------- ---------- BACU002114/1-506 ---------- ---------- ---------- ---------- -VADLLYWKN 501 550 ENSP00000245923/1-545 TRTSGVVFTG LMVSLLCLLH FSIVSVAAHL ALLLLCGTIS LRVYRKVLQA ENSTTRP00000007878/1-544 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000041194/1-541 AKTSGVVFTC LMVSLLSLLH FSIVSVAAHV ALLLLCGTIS LRVYRKVLQA bmy_15600T0/1-433 ---------- ---------- ---------- ---------- ---------- BACU002114/1-506 TRTSGVVFTG LMVSLLSLLR FSIVSVAAHV ALLLLCGTIS LRVYRKVLQA 551 600 ENSP00000245923/1-545 VHRGDGANPF QAYLDVDLTL TREQTERLSH QITSRVVSAA TQLRHFFLVE ENSTTRP00000007878/1-544 XXXXXXXXXX XAYLDVDLTL TREQTERMSQ QIASCVVSAA MQLRHFFLVE ENSBTAP00000041194/1-541 VHRGDGANPF QAYLDVDLTL TQEQTERLSQ QIASRVVSAA IQLRHFFLVE bmy_15600T0/1-433 VHEGTCSFGL QRGWRIDF-- ---------- ---------- ---------- BACU002114/1-506 VHRGDGANPF QAYLDVDLTL TREQTEHMSQ QIASCVVSAA TQLRHFFLVE 601 650 ENSP00000245923/1-545 DLVDSLKLAL LFYILTFVGA IFNGLTLLIL GVIGLFTIPL LYRQHQAQID ENSTTRP00000007878/1-544 DFVDSLKLAL LFYILTFVGA VFNGLTLLIL GVIGLFTVPL LYRQHQAQID ENSBTAP00000041194/1-541 DLVDSLKLAL LFYILTFVGA VFNGLTLLIL GVIGVFTVPL LYRQHQAQID bmy_15600T0/1-433 ---------- ---------- ---------- ---------- ---------- BACU002114/1-506 DFVDSLKLVL LFYILTFVGA IFNGLTLLIL GVIGLFTVPL LYRQHQAQID 651 700 ENSP00000245923/1-545 QYVGLVTNQL SHIKAKIRAK IPGTGALASA AAAVSGSKAK AE ENSTTRP00000007878/1-544 QYVGLVTNQL SHIKAKIRAK FPGTGALASA AAAVSGSKAK AE ENSBTAP00000041194/1-541 QYVGLVTNQL SHIKAKIRAK IPGTGALASV AAAVSGPKAK AE bmy_15600T0/1-433 ---------- ---------- ---------- ---------- -- BACU002114/1-506 QYVGLVTNQL SHIKAKIRAK IPGTGALASA AAAVSGSKAK AE