KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:51:32 2014 Check: 00 ..
Name: ENSP00000362994/1-416 Len: 416 Check: 6815 Weight: 1.00
Name: ENSBTAP00000041215/1-415 Len: 416 Check: 2893 Weight: 1.00
Name: ENSTTRP00000006300/1-415 Len: 416 Check: 4031 Weight: 1.00
Name: bmy_04571T0/1-397 Len: 416 Check: 3004 Weight: 1.00
Name: BACU007297/1-415 Len: 416 Check: 4030 Weight: 1.00
//
1 50
ENSP00000362994/1-416 MASSSGSSPR PAPDENEFPF GCPPTVCQDP KEPRALCCAG CLSENPRNGE
ENSBTAP00000041215/1-415 MASGSASSPR PAPDENEFPF GCPPTACQDP PEPGPVCCAV CLSEKVRNDE
ENSTTRP00000006300/1-415 MASGSASSRH PAPDENEFPF GCPPTVCQDP PEPRPLCCAV CLSENVRNGE
bmy_04571T0/1-397 MASGSASSPR PAPDENEFPF GCPPTVCQDP PEPRPLCCAV CLSENVRNVE
BACU007297/1-415 MASGSASSPR PAPDENEFPF GCPPTVCQDP PEPRPLCCAV CLSENVRNGE
51 100
ENSP00000362994/1-416 DQICPKCRGE DLQSISPGSR LRTQEKAHPE VAEAGIGCPF AGVGCSFKGS
ENSBTAP00000041215/1-415 DRICPKCKGD DTPSESPGS- LLSQEKDHPE VAEAGVGCPF AGVGCSFKGS
ENSTTRP00000006300/1-415 DRICPKCKGD DTPSERPGS- LLSQEQDHPE VAEAGVGCPF AGVGCAFKGG
bmy_04571T0/1-397 DRICPKCKGD DTPSERPGS- LLSQEQDHPE VAEAGVGCPF AGVGCSFKGG
BACU007297/1-415 DRICPKCKGD DTPSERPGS- LLSQEQDHPE VAEAGVGCPF AGVGCSFKGG
101 150
ENSP00000362994/1-416 PQSVQEHEVT SQTSHLNLLL GFMKQWKARL GCGLESGPMA LEQNLSDLQL
ENSBTAP00000041215/1-415 PKFMEEHEVT SQAAHLNLLL GFMKQWKAQL GSGLGYGPMA LERNLSDLQL
ENSTTRP00000006300/1-415 PKFMQEHEVT SQATHLNLLL GFMKQWKAQL GSGLGSGPMA LEQNLSDLQL
bmy_04571T0/1-397 PKFMQEHEVT SQATHLNLLL GFMKQWKAQL GSGLGSGPMA LERNLSDLQL
BACU007297/1-415 PKFMQEHEVT SQATHLNLLL GFMKQWKAQL GSGLGSGPMA LEQNLSDLQL
151 200
ENSP00000362994/1-416 QAAVEVAGDL EVDCYRAPCS ESQEELALQH FMKEKLLAEL EGKLRVFENI
ENSBTAP00000041215/1-415 QGAVEVAGDL EVDCYRAPCS ESQDELALHH FMKEKLLNEL EGKLCVFENI
ENSTTRP00000006300/1-415 QGAVETAGDL EVDCYRAPCS ESQEELALQH FMKEKLLTEL EGKLCVFENI
bmy_04571T0/1-397 QGAVEAAGDL EVDCYRAPCS ESQEELALQH FMKEKLLTEL EGKLCVFENI
BACU007297/1-415 QGAVEAAGDL EVDCYRAPCS ESQEELALQH FMKEKLLTEL EGKLCVFENI
201 250
ENSP00000362994/1-416 VAVLNKEVEA SHLALATSIH QSQLDRERIL SLEQRVVELQ QTLAQKDQAL
ENSBTAP00000041215/1-415 VAVLNKEVEA SHLALAASIH QSQLDREHIL SLEQRVLELQ QTLAQKDQAL
ENSTTRP00000006300/1-415 VAVLNKEVEA SHLALAASIH QSRLGREHIL SLERRVMELQ QTLAQKDQAL
bmy_04571T0/1-397 VAVLNKEVEA SHLALAASIH QSQLDREHIL SLERRVVELQ QTLAQKDQAL
BACU007297/1-415 VAVLNKEVEA SHLALAASIH QSQLDREHIL SLERRVVELQ QTLAQKDQAL
251 300
ENSP00000362994/1-416 GKLEQSLRLM EEASFDGTFL WKITNVTRRC HESACGRTVS LFSPAFYTAK
ENSBTAP00000041215/1-415 GKLEQSLRLV EEASYDGTFL WKITNVTRRC HESACGRTVS LFSPAFYTAK
ENSTTRP00000006300/1-415 GKLEQSFRLM EEASYDGTFL WKVTSVTRRC HESACGRTVS LFSPAFYTAK
bmy_04571T0/1-397 GKLEQSFRLM EEASYDGTFL WKVTSVTRRC HESACGRTVS LFSPAFYTAK
BACU007297/1-415 GKLEQSFRLM EEASYDGTFL WKVTSVTRRC HESACGRTVS LFSPAFYTAK
301 350
ENSP00000362994/1-416 YGYKLCLRLY LNGDGTGKRT HLSLFIVIMR GEYDALLPWP FRNKVTFMLL
ENSBTAP00000041215/1-415 YGYKLCLRLY LNGDGTGKRT HLSLFIVIMR GEYDALLPWP FRNKVTFMLL
ENSTTRP00000006300/1-415 YGYKLCLRLY LNGDGTGKRT HLSLFIVIMR GEYDALLPWP FRNKVTFMLL
bmy_04571T0/1-397 YGYKLCLRLY LNGDGTGKRT HLSLFI---- ---------- ----VTFMLL
BACU007297/1-415 YGYKLCLRLY LNGDGTGKRT HLSLFIVIMR GEYDALLPWP FRNKVTFMLL
351 400
ENSP00000362994/1-416 DQNNREHAID AFRPDLSSAS FQRPQSETNV ASGCPLFFPL SKLQSPKHAY
ENSBTAP00000041215/1-415 DQNNREHAID AFRPDLNSAS FQRPQSETNV ASGCPLFFPL NKLQSPKHAY
ENSTTRP00000006300/1-415 DQNNREHAID AFRPDLNSAS FQRPQSETNV ASGCPLFFPL NKLQSPKHAY
bmy_04571T0/1-397 DQNNREHAID AFRPDLNSAS FQRPQSETNV ASGCPLFFPL NKLQSPKHAY
BACU007297/1-415 DQNNREHAID AFRPDLNSAS FQRPQSETNV ASGCPLFFPL NKLQSPKHAY
401 450
ENSP00000362994/1-416 VKDDTMFLKC IVETST
ENSBTAP00000041215/1-415 VKDDTMFVKC VVDTNT
ENSTTRP00000006300/1-415 VKDDTMFLKC IVETDA
bmy_04571T0/1-397 VKDDTMFLKC IVETNA
BACU007297/1-415 VKDDTMFLKC IVETNA