KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:51:32 2014 Check: 00 .. Name: ENSP00000295150/1-206 Len: 396 Check: 6055 Weight: 1.00 Name: bmy_05484T0/1-288 Len: 396 Check: 3913 Weight: 1.00 Name: ENSTTRP00000012746/1-204 Len: 396 Check: 6844 Weight: 1.00 Name: ENSBTAP00000041217/1-318 Len: 396 Check: 5954 Weight: 1.00 // 1 50 ENSP00000295150/1-206 ---------- --MAATKTAS YDEHFRPEKL REW------- ---------- bmy_05484T0/1-288 MKEFKEVEKA KLHSRFPGIS NSRHFMTAN- -EWLKLPTNY IESEFCKRSR ENSTTRP00000012746/1-204 ---------- --MAATKMSN YDKHFGPEQL -KW------- ---------- ENSBTAP00000041217/1-318 ---------- -------MSN CGKHFGPEQL EKW------- ---------- 51 100 ENSP00000295150/1-206 ---------- -----PEPES VSLME----- ---------- ---------V bmy_05484T0/1-288 LKVKVNFNES SFDLKPSAKT PHLLESQEEE KAVVYKRLAY NSVFLKSPKA ENSTTRP00000012746/1-204 ---------- -----PEPES VALME----- ---------- ---------A ENSBTAP00000041217/1-318 ---------- -----PELES VTLME----- ---------- ---------A 101 150 ENSP00000295150/1-206 LAREDIDEAV CAILFKENSI V--------- ---------- ---------- bmy_05484T0/1-288 LAREDIDEAV YVILFRENYV AKRLDTYFQH LDVFKERRKE LLHKKWTENV ENSTTRP00000012746/1-204 LAREDIDEAV YVILFRENYV A--------- ---------- ---------- ENSBTAP00000041217/1-318 LAREDIDEAV YAILFRENCI AKRLDTYFQH LDAFKERKKE LLHKKWTENV 151 200 ENSP00000295150/1-206 ---------- ---------- ---------- ---------- ---------- bmy_05484T0/1-288 AKPLQQRITE KVISYKGLEK TKQENSEYFL KHTNKTEIIF GDFYDPEVYN ENSTTRP00000012746/1-204 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000041217/1-318 AKPLQQRIME KVISYKALEK TKQENFEYFL KHTNKTEIIF GDFYDPEVYN 201 250 ENSP00000295150/1-206 ---------- --KVTVPPFV DPLFQRQQEV DEERRTGLQC ETGKRHSIKE bmy_05484T0/1-288 PFYMTKKDSN YGKVTVPPFC DPLFRRQQEL DEERRAVFQY KTGFRNQ--- ENSTTRP00000012746/1-204 ---------- --KVTVPPFC DPLFRRQQEL DEERRAIFQY KMGKRCTLKE ENSBTAP00000041217/1-318 PFYMTKKDPN YGKVAVPPFC DPLFIRQQEI DEEQRAVFQY TTGKRCTLKE 251 300 ENSP00000295150/1-206 LEEIEKARLH ASSPYFTFTS HCVIPKEWHK ASAR--ARSK TYKYSPEKLI bmy_05484T0/1-288 ---------- --------TA QTQILGGWGR PAEA--GVTA RGRKSDDS-- ENSTTRP00000012746/1-204 FKELEKARQY ARLPQLTFSL HRVVPREQPT ASARPVGSKT RSKCSPEKLV ENSBTAP00000041217/1-318 FKELEKARQY ARLPQFTFSL HSMVSKDRPK AFARPVGSKT HSKCSPEKLV 301 350 ENSP00000295150/1-206 YADKK-QKRK EKKTADLSQA AFERQFLSSK LSQKNKVGER KGLVSRGLGR bmy_05484T0/1-288 ---------- ---------- ---------- ------RGPR -------AAP ENSTTRP00000012746/1-204 CAEEKYLPDK EKTTSDLSQT VSERQFYSSK LGQE--KAEK KSLVSRDLGQ ENSBTAP00000041217/1-318 CAEEKFPPYK VKMTSDVNQT VFERRFYSSK ISQESKRHEK KGLA---LGT 351 400 ENSP00000295150/1-206 G------WHA GLCSTHEQHI LVPE------ ---------- ------ bmy_05484T0/1-288 G-------HP RNC------- -AP------- ---------- ------ ENSTTRP00000012746/1-204 G------SDA ELCNIHRQT- -SPE------ ---------- ------ ENSBTAP00000041217/1-318 GQHRPRSWAA GEGQQRRRS- -QPVDRRVMT AEVLGQHLAA LQLGDR