KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:33 2014 Check: 00 .. Name: ENSP00000263663/1-588 Len: 592 Check: 1824 Weight: 1.00 Name: ENSBTAP00000041230/1-590 Len: 592 Check: 5281 Weight: 1.00 Name: bmy_15213T0/1-313 Len: 592 Check: 4569 Weight: 1.00 Name: BACU016788/1-381 Len: 592 Check: 1807 Weight: 1.00 Name: ENSTTRP00000016304/1-589 Len: 592 Check: 1923 Weight: 1.00 // 1 50 ENSP00000263663/1-588 MDLEEAEEFK ERCTQCAAVS WGLTDEGKYY CTSCHNVTER YQEVTNTDLI ENSBTAP00000041230/1-590 MDLEEAREFR ERCSQCAAVS WGLTDEGKYY CTSCHNVTER SREVIDTGAI bmy_15213T0/1-313 ---------- ---------- ---------- ---------- ---------- BACU016788/1-381 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016304/1-589 MDLEEAKEFK DRCSQCAAVS WGLTDEGKYY CTSCHNVTER SREVINTGAI 51 100 ENSP00000263663/1-588 PNTQIKALNR GLKKKNNTEK GWDWYVCEGF QYILYQQAEA LKNLGVGPEL ENSBTAP00000041230/1-590 PNTKIQAINR GLKRKRKLEK GWDWYVCEGF QHILYQQAEA LQSLGVGPEL bmy_15213T0/1-313 ---------- ---------- ---------- ---------- ---------- BACU016788/1-381 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016304/1-589 PNTKIQAINR GLKRKRKLEK GWDWYVCEGF QHILYQQAKA LQTLGVGPEL 101 150 ENSP00000263663/1-588 KNDVLHNFWK RYLQKSKQAY CKNPVYTTGR KPTVLEDNLS HSDWASEPEL ENSBTAP00000041230/1-590 KNEVLHNFWK RYLQKSKQAY CKNPVYTSRR KTTVLEDNLS HSDWESEPEL bmy_15213T0/1-313 ---------- ---------- ---------- ---------- ---------- BACU016788/1-381 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016304/1-589 KXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXVLEDNPS HSDWDSEPEL 151 200 ENSP00000263663/1-588 LSDVSCPPFL ESGAESQSDI HTRKPFPVSK ASQSET-SVC SGSLDGVEYS ENSBTAP00000041230/1-590 LSDMSCLSFA ESGAESQPDV RTPKPFPIIK ASHSETTSVC SGSLDGVEYS bmy_15213T0/1-313 ---------- ---------- ---------- ---------- ---------- BACU016788/1-381 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016304/1-589 LSDLSCPSFV ESGAESQPDV HTQKPFPIIK ASQSETASVC SGSLDGVEYS 201 250 ENSP00000263663/1-588 QRKEKGIVKM TMPQTLAFCY LSLLWQREAI TLSDLLRFVE EDHIPYINAF ENSBTAP00000041230/1-590 LRKEKGVMKM SVPRTLAFCY LSLLWQRETI TLSDLLRFVE EEHIPYIHAF bmy_15213T0/1-313 ---------- ---------- --MLWSD--- ---------- -----YDNIV BACU016788/1-381 ---------M TVPRTLAFCY LSLLWQRETI TLADLLRFVE EEHIPYINAF ENSTTRP00000016304/1-589 LRKEKGIVKM TVPRTLAFCY LSLLWQRETI TLADLLRFVE EEHIPYINAF 251 300 ENSP00000263663/1-588 QHFPEQMKLY GRDRGIFG-- IESWPDYEDI YKKTVEVGTF LDLPRFPDIT ENSBTAP00000041230/1-590 QHFPEEMKLY GRDKGIFA-- IESWPNYEVI FKKIIEVATF LDLPRFPDIT bmy_15213T0/1-313 T--PVGLQLY TR---FFHDW QESWPNYEDI YKKIIEVATF LDLPRFPDIT BACU016788/1-381 QHFPEEMKLY GRDKGIFA-- IESWPNYEDI FKKIIEVATF LDLPRFPDIT ENSTTRP00000016304/1-589 QHFPEEMKLY GRDKGIFA-- IESWPNYEDI YKKVIEVATF LDLPRFPDIT 301 350 ENSP00000263663/1-588 EDCYLHPNIL CMKYLMEVNL PDEMHSLTCH VVKMTGMGEV DFLTFDPIAK ENSBTAP00000041230/1-590 ENCYLHPNIL CMKYLMEVNL PDEMHNVTCL VVKSTGIGEV DFLRFDPIAK bmy_15213T0/1-313 EDCYLHPNIL CMKYLMEVNL PDEMHDLTCH VVKVTGIGEV DFLTFDPIAK BACU016788/1-381 EDCYLHPNIL CMKYLMEVNL PDEMHDLTCH VVKVTGIGEV DFLTFDPIAK ENSTTRP00000016304/1-589 EDCYLHPNIL CMKYLMEVNL PDEMHDLTCH VVKVTGMGEV DFLTFDPIAK 351 400 ENSP00000263663/1-588 MAKTVKYDVQ AVAIIVVVLK LLFLLDDSFE WSLSNLAEKH NEKNKKDKPW ENSBTAP00000041230/1-590 KAKTVKYDVQ AVAVIVVALK LLFLLDDNLE WSLSNIAKKY NEKNKEDKPW bmy_15213T0/1-313 KAKTVKYDVQ AVAVIVVVLK LLFLLDDNLE WSLSNIAEKY NEKNEEDKPW BACU016788/1-381 KAKTVKYDVQ AVAVIVVVLK LLFLLDDNLE WSLSNIAEKY NEKNEEDKPW ENSTTRP00000016304/1-589 KAKAVKYDVQ AVAVIVVVLK LLFLLDDNLE WSLSNIAEKY NEKNEEDKPW 401 450 ENSP00000263663/1-588 FDFRKWYQIM KKAFDEKKQK WEEARAKYLW KSEKPLYYSF VDKPVAYKKR ENSBTAP00000041230/1-590 FDFRKWYQVM KKAIDEKKQK WEEARAKFLW KGEKPLYYSA IDRPVVYKRR bmy_15213T0/1-313 FDFRKWYQVM KKAIDEKKQK WEEARAKYLW KSEKPLYHSA IDRSV----- BACU016788/1-381 FDFRKWYQVM KKAIDEKKQK WEEARAKYLW KSEKPLYHSA IDRSVVYKRR ENSTTRP00000016304/1-589 FDFRKWYQVM KKAVDEKKQK WEEARAKYLW KSEKPLYHSA IDRSVVYKRR 451 500 ENSP00000263663/1-588 EMVVNLQKQF STLVESTATA GKKSPSSFQF NWTEEDTDRT CFHGHSLQGV ENSBTAP00000041230/1-590 EMVVSLQKQF STLVDSAPNV EKKKPSSFQF NWTEEDSERP CFHGHSLQGV bmy_15213T0/1-313 ---------- ---------- ---------F SWTEEGSDRT CFHGHSLQGV BACU016788/1-381 EMVVSLQKQF STLVDSTPTV EKKSPSSFQF SWTEEGSDRT CFHGHSLQGV ENSTTRP00000016304/1-589 EMVVSLQKQF STLVGSTPTV EKQSPSSFQF SWTEEGGDRP CFHGHSLQGV 501 550 ENSP00000263663/1-588 LKEKGQSLLT KNSLYWLSTQ KFCRCYCTHV TTYEESNYSL SYQFILNLFS ENSBTAP00000041230/1-590 LQQKGQSLTT KNSLYWLSTQ KFCKSHCKHV TTYEESNFSL SYQFILNLFS bmy_15213T0/1-313 LKQKGQSLMT KNSLYWLSTQ KFCKSYCKHV TTYEESNFSL SYQFILNLFS BACU016788/1-381 LKQKGQSLMT KNSLYWLSTQ KFCKSYCKHV TTYEESNFSL SYQFILNLFS ENSTTRP00000016304/1-589 LKQKGQSLMT KNSLY-LSTQ KFCKSYCKHV TTYEESNFSL SYQFILNLFS 551 600 ENSP00000263663/1-588 FLLRIKTSLL HEEVSLVEKK LFEKKYS-VK RKKSRSKKVR RH ENSBTAP00000041230/1-590 FLLRIKTSFL HEEVSLIEKR LFKAKYNKTN KKSSRSRKTR KY bmy_15213T0/1-313 FLLRIKTSLL HEEVSLIEKR LFKAKYSTTK KKSSRSRKVR KC BACU016788/1-381 FLLRIKTSLL HEEVSLIEKR LFKAKYSTTK KKSSRSRKVR KC ENSTTRP00000016304/1-589 FLLRIKTSLL HEEVSLIEKR LFKAKYSTTK KKSSRSRKAR KC