KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:33 2014 Check: 00 .. Name: ENSTTRP00000007850/1-418 Len: 525 Check: 6640 Weight: 1.00 Name: bmy_15593T0/1-525 Len: 525 Check: 5100 Weight: 1.00 Name: BACU002109/1-495 Len: 525 Check: 8146 Weight: 1.00 Name: ENSP00000375810/1-504 Len: 525 Check: 182 Weight: 1.00 Name: ENSBTAP00000041235/1-505 Len: 525 Check: 6586 Weight: 1.00 // 1 50 ENSTTRP00000007850/1-418 ---------- ---------- ---------- ---------- ---------- bmy_15593T0/1-525 MSVKVAAPGS MGLGPEHLSP EELVRQTRQV VQGLEALRAE HRGLAGHLAE BACU002109/1-495 ---------- MGLGPEHLSP EELVRQTRQV VQGLEALQAE HRGLAGHLAE ENSP00000375810/1-504 MSVQVAAPGS AGLGPERLSP EELVRQTRQV VQGLEALRAE HHGLAGHLAE ENSBTAP00000041235/1-505 MSVQVAAPGG LGLGLERPSP EELVRQTRQV VKGLEALRAE HRGLAGHLAE 51 100 ENSTTRP00000007850/1-418 ---------- ---------- ---------- ------VLLA LSAHVGALEA bmy_15593T0/1-525 ALAGQGPVAG LELLEEKQEV VSHSLEAIEL GLGEAQVLLA LSAHVGALEA BACU002109/1-495 ALAGQGPVAG LQLLEEKQEV VSHSLEAIEL GLGEAQVLLA LSAHVGALEA ENSP00000375810/1-504 ALAGQGPAAG LEMLEEKQQV VSHSLEAIEL GLGEAQVLLA LSAHVGALEA ENSBTAP00000041235/1-505 ALAAQGPAAG LELLEEKQQV VSHSLEAIEL GLGEAQVLLA LSAHVGALEA 101 150 ENSTTRP00000007850/1-418 EKQRLRAQAR RLAQENAWLR EELEETQQRL RASEEAVAQL EEEKSHLQFL bmy_15593T0/1-525 EKQRLRAQAR RLAQENAWLR EELEETQQRL RASEEAVAQL EEEKSHLEFL BACU002109/1-495 EKQRLRAQAR RLAQENAWLW EELGETQQRL RASEEAVAQL EEEKSHLEFL ENSP00000375810/1-504 EKQRLRSQAR RLAQENVWLR EELEETQRRL RASEESVAQL EEEKRHLEFL ENSBTAP00000041235/1-505 EKQRLRAQAR RLAQENAWLR EELEETQRRL RASEEAVAQL EEEKSHLEFL 151 200 ENSTTRP00000007850/1-418 GQLQQYDPPA ESQQPESPHQ QDSLASLFPS EEEERKGPEA AGAISAQQGG bmy_15593T0/1-525 GQLRQYDPPA ESQQPESPHR QDSLASLFPS EEEERKGPEA AGAISAQQGG BACU002109/1-495 GQLRQYDSPA ESQQPESPHR QDSLASLFPS EEEERKGPEA AGAISAQQGG ENSP00000375810/1-504 GQLRQYDPPA ESQQSESPPR RDSLASLFPS EEEERKGPEA AGAAAAQQGG ENSBTAP00000041235/1-505 GQLRQYDPPA ESQQPESPPR RDSLASLFPS EEEERRGPEA VGAAAAQQGG 201 250 ENSTTRP00000007850/1-418 YEIPARLRTL HNLVLQYTGQ GRYEVAAPLC RQALEDLERS SGHCHPDVAT bmy_15593T0/1-525 YEIPARLRTL HNLVLQYAGQ GRYEVAAPLC RQALEDLERS SGHCHPDVAT BACU002109/1-495 YEIPARLRTL HNLVLQYAGQ GRYEVAAPLC RQALEDLERS SGHCHPDVAT ENSP00000375810/1-504 YEIPARLRTL HNLVIQYAGQ GRYEVAVPLC RQALEDLERS SGHCHPDVAT ENSBTAP00000041235/1-505 YEIPARLRTL HNLVIQYAGQ GRYEVAVPLC RQALEDLERS SGHCHPDVAT 251 300 ENSTTRP00000007850/1-418 MLNILALVYR DQNKYKEATD LLHDALQIRE QTLGREHPAV AATLNNLAVL bmy_15593T0/1-525 MLNILALVYR DQNKYKEATD LLHDALQIRE QTLGREHPAV AATLNNLAVL BACU002109/1-495 MLNILALVYR DQNKYKEATD LLHDALQIRE QTLGREHPAV AATLNNLAVL ENSP00000375810/1-504 MLNILALVYR DQNKYKEATD LLHDALQIRE QTLGPEHPAV AATLNNLAVL ENSBTAP00000041235/1-505 MLNILALVYR DQNKYKEATD LLHDALQIRE QTLGPEHPAV AATLNNLAVL 301 350 ENSTTRP00000007850/1-418 YGKRGRYQEA EPLCQRALEI REKVLGANHP DVAKQLNNLA LLCQNQGKFE bmy_15593T0/1-525 YGKRGRYQEA EPLCQRALEI REKVLGASHP DVAKQLNNLA LLCQNQGKFE BACU002109/1-495 YGKRGRYQEA EPLCQRALEI REKVLGASHP DVAKQLNNLA LLCQNQGKFE ENSP00000375810/1-504 YGKRGRYREA EPLCQRALEI REKVLGADHP DVAKQLNNLA LLCQNQGKFE ENSBTAP00000041235/1-505 YGKRGRYREA EPLCQRALEI REKVLGADHP DVAKQLNNLA LLCQNQGKFE 351 400 ENSTTRP00000007850/1-418 EVERHYGRAL SIYKALGGPH DPNVAKTKNN LXXXXXXXXX XXXXXXXXXX bmy_15593T0/1-525 EVERHYARAL SIYTALGGPH DPNVAKTKNN LASAYLKQNK YQQAEELYKE BACU002109/1-495 EVERHYARAL SIYTALGGPH DPNVAKTKNN LASAYLKQNK YQQAEELYKE ENSP00000375810/1-504 DVERHYARAL SIYEALGGPH DPNVAKTKNN LASAYLKQNK YQQAEELYKE ENSBTAP00000041235/1-505 EVERHYARAL SIYEALGGPH DPNVAKTKNN LASAYLKQNK YQQAEELYKE 401 450 ENSTTRP00000007850/1-418 XXXXXXXXXX XXAP------ -------NTG TAGDAKQ--- -----AFRRS bmy_15593T0/1-525 ILSRETLPAP LGEPPAPPLS PRGPLSIPTT VAPSVPQEPP TQAQLTLRRS BACU002109/1-495 ILSREALPAP LGAP------ -------NTG TAGDAEQQ-- -----TLRRS ENSP00000375810/1-504 ILHKEDLPAP LGAP------ -------NTG TAGDAEQ--- -----ALRRS ENSBTAP00000041235/1-505 ILHREALPAP LGAP------ -------NTG TTSDTQQQ-- -----TLRRS 451 500 ENSTTRP00000007850/1-418 SSFSKLRESI RRGSEKLVSR LRGEGVVGAA GMKRAMSLNM LNVDGSRAAG bmy_15593T0/1-525 SSFSKLRESI RRGSEKLVSR LRGEGAVGAA GMKRAVSLNM LNMDGSRAAG BACU002109/1-495 SSFSKLRESI RRGSEKLVSR LRGEGAVGAA EMKRAVSLNM LNVDGTRAAG ENSP00000375810/1-504 SSLSKIRESI RRGSEKLVSR LRGEAAAGAA GMKRAMSLNT LNVDAPRAPG ENSBTAP00000041235/1-505 SSFSKLRESI RRGSEKLVSR LRGEGAAGAA GMKRAMSLSM LNTDGSRAPE 501 550 ENSTTRP00000007850/1-418 NQFPSRHLGE ASRTLSTSTQ DLGPR bmy_15593T0/1-525 NQFPSRHLSE ASRTLSTSTQ DLGPR BACU002109/1-495 NQFPSRHLSE ASRTLSASTQ DLGPR ENSP00000375810/1-504 TQFPSWHLDK APRTLSASTQ DLSPH ENSBTAP00000041235/1-505 NQFPRQHLSE ASRTLSTSTQ DLGPR