KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:34 2014 Check: 00 .. Name: ENSP00000378725/1-1357 Len: 1478 Check: 3367 Weight: 1.00 Name: ENSBTAP00000041243/1-1302 Len: 1478 Check: 5022 Weight: 1.00 Name: bmy_08088T0/1-1460 Len: 1478 Check: 2767 Weight: 1.00 Name: BACU015367/1-1357 Len: 1478 Check: 8918 Weight: 1.00 Name: ENSTTRP00000001932/1-1357 Len: 1478 Check: 9116 Weight: 1.00 // 1 50 ENSP00000378725/1-1357 ME-------- --FYESAYF- ---------- ---------- ---------- ENSBTAP00000041243/1-1302 ME-------- --FYESTYF- ---------- ---------- ---------- bmy_08088T0/1-1460 MPIQAEDCGV NGFFNVLAYP PVIFGLERGP LDRSGCIVNS QDHQGRLPDT BACU015367/1-1357 ME-------- --FYESTYF- ---------- ---------- ---------- ENSTTRP00000001932/1-1357 ME-------- --FYESTYF- ---------- ---------- ---------- 51 100 ENSP00000378725/1-1357 IVLIPS---- ---------- ---------- ---------- ---------- ENSBTAP00000041243/1-1302 IVLIPS---- ---------- ---------- ---------- ---------- bmy_08088T0/1-1460 IFLIPDVGIV VSPANVDFVV IGAKGSLGTI PVSGMTGTLF VVFSKDRKLG BACU015367/1-1357 IVLIPS---- ---------- ---------- ---------- ---------- ENSTTRP00000001932/1-1357 IVLIPS---- ---------- ---------- ---------- ---------- 101 150 ENSP00000378725/1-1357 ---------- ---------- --------IV ITVIFLFFWL FMKETLYDEV ENSBTAP00000041243/1-1302 ---------- ---------- --------VV ITVIFLFFWL FMKETLYDEV bmy_08088T0/1-1460 VGAIRMGSER GIRGLWIYQE YDMHTLFEVV ITVIFLFFWL FMKETLYDEV BACU015367/1-1357 ---------- ---------- --------VV ITVIFLFFWL FMKETLYDEV ENSTTRP00000001932/1-1357 ---------- ---------- --------VV ITVIFLFFWL FMKETLYDEV 151 200 ENSP00000378725/1-1357 LAKQKREQKL IPTKTDKKKA EKKKNKKKEI QNGNLHESDS ESVPRDFKLS ENSBTAP00000041243/1-1302 LAKQKREQKL IPTKTDKKKA EKKKNKKKEI QNGNLHESDS ESVPRDFKLS bmy_08088T0/1-1460 LAKQKREQKL IPTKTDKKKA EKKKNKKKEL QNGNLHESDS ESVPRDFKLS BACU015367/1-1357 LAKQKREQKL IPTKTDKKKA EKKKNKKKEL QNGNLHESDS ESVPRDFKLS ENSTTRP00000001932/1-1357 LAKQKREQKL IPTKTDKKKA EKKKNKKKEL QNGNLHESDS ESVPRDFKLS 201 250 ENSP00000378725/1-1357 DALAVEDDQV APVPLNVVET SSSVRERKKK EKKQKPVLEE QVIKESDASK ENSBTAP00000041243/1-1302 DALAVEDEQV VPVPLNVVES PTSVRERKKK EKKHKPVLEE QVTKESDVSK bmy_08088T0/1-1460 DALAVEDEQV VPVPLNVVES SSSVRERKKK EKKHKPVLEE QVTKESDVSK BACU015367/1-1357 DALAVEDEQV VPVPLNVVES SSSVRERKKK EKKHKPVLEE QVTKESDVSK ENSTTRP00000001932/1-1357 DALAVEDEQV VPVPLNVVES SSSVRERKKK EKKHKPVLEE QVTKESDVSK 251 300 ENSP00000378725/1-1357 IPGKKVEPVP VTKQPTPPSE AAASKKKPGQ KKSKNGSDDQ DKKVETLMVP ENSBTAP00000041243/1-1302 IPCKKVEPVP VTKQPTPPSE APASKKKPGQ KKSKNGSDDQ DKKVESLAAP bmy_08088T0/1-1460 IPCKKVEPVP VTKQPTPPLE AAASKKKPGQ KKSKNGSDDQ DKKVEPLMAP BACU015367/1-1357 IPCKKVEPVP VTKQPTPPLE AAASKKKPGQ KKSKNGSDDQ DKKVDPLMAP ENSTTRP00000001932/1-1357 IPCKKVEPVP VTKQPTPPLE AAASKKKPGQ KKSKNGSDDQ DKKVEPLMAP 301 350 ENSP00000378725/1-1357 SKRQEALPLH QETKQESGSG KKKASSKKQK TENVFVDEPL IHATTYIPLM ENSBTAP00000041243/1-1302 SKKQESLPLH QETKQESGSG KKKVSSKKQK TENVLVDEPL IHATTYIPLM bmy_08088T0/1-1460 SKKQESLPLH QETKQEGGSG KKKXSSKKQK TENVLVDEPL IHATTYIPLM BACU015367/1-1357 SKKQESLPLH QETKQEGGSG KKKVSSKKQK TENVLVDEPL IHATTYIPLM ENSTTRP00000001932/1-1357 SKKQEPLPLH QETKQEGGSG KKKVSSKKQK TENVLVDEPL IHATTYIPLM 351 400 ENSP00000378725/1-1357 DNADSSPVVD KREVIDLLKP DQVEGIQKSG TKKLKTETDK ENAEVKFKDF ENSBTAP00000041243/1-1302 DNADSNPVVD KREVIDLIKP DQVEVIQKTG AKKLKIETDK ENAEVKFKDF bmy_08088T0/1-1460 DNADSNPVVD KREVIDLIKP DQVEGIQKTG AKKLKIEADK ENAEVKFKDF BACU015367/1-1357 DNADSNPVVD KREVIDLIKP DQVEGIQKTG AKKLKIEADK ENAEVKFKDF ENSTTRP00000001932/1-1357 DNADSNPVMD KREVIDLIKP DQVEGIQKTG AKKLKIEADK ENAEVKFKDF 401 450 ENSP00000378725/1-1357 LLSLKTMMFS EDEALCVVDL LKEKSGVIQD ALKKSSKGEL TTLIHQLQEK ENSBTAP00000041243/1-1302 LLSLKTMMFS EEEALCVVDL LKEKSGVIQD ALKKYNKGEL TALVHQLQEK bmy_08088T0/1-1460 LLSLKTMMFS EDEALCVVDL LKEKSGVIQD ALKKSNKGEL TALVHQLQEK BACU015367/1-1357 LLSLKTMMFS EDEALCVVDL LKEKSGVIQD ALKKSNKGEL TALVHQLQEK ENSTTRP00000001932/1-1357 LLSLKTMMFS EDEALCVVDL LKEKSGVIQD ALKKSNKGEL TALVHQLQEK 451 500 ENSP00000378725/1-1357 DKLLAAVKED AAATKDRCKQ LTQEMMTEKE RSNVVITRMK DRIGTLEKEH ENSBTAP00000041243/1-1302 DKLVTALKED AASMKDRCKQ LTQEMMAEKE RSSVVIARMK DRIGTLEKEH bmy_08088T0/1-1460 DKLLTALKED AAAMKDRCKQ LTQEMMAEKE RSNVVIARMK DRIGTLEKEH BACU015367/1-1357 DKLLTALKED AAAVKDRCKQ LTQEMMAEKE RSNVVIARMK DRIGTLEKEH ENSTTRP00000001932/1-1357 DKLLTALKED AAAMKDRCKQ LTQEMMAEKE RSSVVIARMK DRIGTLEKEH 501 550 ENSP00000378725/1-1357 NVFQNKIHVS YQETQQMQMK FQQVREQMEA EIAHLKQENG ILRDAVSNTT ENSBTAP00000041243/1-1302 NVFQNKMHVS YQETQQMQMK FQQVREQMEA EIAHLKQENG ILRDAVSNTT bmy_08088T0/1-1460 NVFQNKMHVS YQETQQMQMK FQQVREQMEA EIAHLKQENG ILRDAVSNTA BACU015367/1-1357 NVFQNKMHVS YQETQQMQMK FQQVREQMEA EIAHLKQENG ILRDAVSNTT ENSTTRP00000001932/1-1357 NVFQNKMHVS YQETQQMQMK FQQVREQMEA EIAHLKQENG ILRDAVSNTT 551 600 ENSP00000378725/1-1357 NQLESKQSAE LNKLRQDYAR LVNELTEKTG KLQQEEVQKK NAEQAATQLK ENSBTAP00000041243/1-1302 NQLESKQSAE LNKLRQDYAR LVSELTEKTG KLQQEEVQKK NAEQAVTQLK bmy_08088T0/1-1460 NQLESKQSAE LNKLRQDYAR LVNELTEKTG KLQQEEVQKK NAEQAVTQLK BACU015367/1-1357 NQLESKQSAE LNKLRQDYAR LVNELTEKTG KLQQEEVQKK NAEQAVTQLK ENSTTRP00000001932/1-1357 NQLESKQSAE LNKLRQDYAR LVNELTEKTG KLQQEEVQKK NAEQAVTQLK 601 650 ENSP00000378725/1-1357 VQLQEAERRW EEVQSYIRKR TAEHEAAQQD LQSKFVAKEN EVQSLHSKLT ENSBTAP00000041243/1-1302 VQLQEAERRW EEVQSYIRKR TAEHEAAQQD LQSKFVAKEN EVQSLHSKLT bmy_08088T0/1-1460 VQLQEAERRW EEVQSYIRKR TAEHEAAQQD LQSKFVAKEN EVQSLHSKLT BACU015367/1-1357 VQLQEAERRW EEVQSYIRKR TAEHEAAQQD LQSKFVAKEN EVQSLHSKLT ENSTTRP00000001932/1-1357 VQLQEAERRW EEVQSYIRKR TAEHEAAQQD LQSKFVAKEN EVQSLHSKLT 651 700 ENSP00000378725/1-1357 DTLVSKQQLE QRLMQLMESE QKRVNKEESL QMQVQDILEQ NEALKAQIQQ ENSBTAP00000041243/1-1302 DTLVSKQQLE QRLMQLMESE QKRVNKEESL QMQVQDILEQ NEALKAQIQQ bmy_08088T0/1-1460 DTLVSKQQLE QRLMQLMESE QKRVNKEESL QMQVQDILEQ NEALKAQIQQ BACU015367/1-1357 DTLVSKQQLE QRLMQLMESE QKRVNKEESL QMQVQDILEQ NEALKAQIQQ ENSTTRP00000001932/1-1357 DTLVSKQQLE QRLMQLMESE QKRVNKEESL QMQVQDILEQ NEALKAQIQQ 701 750 ENSP00000378725/1-1357 FHSQIAAQTS ASVLAEELHK VIAEKDKQIK QTEDSLASER DRLTSKEEEL ENSBTAP00000041243/1-1302 FHSQIAAQTS ASALAEELHK VIAEKDKQIK QTEDSLANEH DHLASKEEEL bmy_08088T0/1-1460 FHSQIAAQTS ASALAEELHK VIAEKDKQIK QTEDSLANEH DHLASKEEEL BACU015367/1-1357 FHSQIAAQTS ASALAEELHK VIAEKDKQIK QTEDSLANEH DHLASKEEEL ENSTTRP00000001932/1-1357 FHSQIAAQTS ASALAEELHK VIAEKDKQIK QTEDSLANEH DHLASKEEEL 751 800 ENSP00000378725/1-1357 KDIQNMNFLL KAEVQKLQAL ANEQAAAAHE LEKMQQSVYV KDDKIRLLEE ENSBTAP00000041243/1-1302 KDIQNMNFLL KAEVQKLQAL ANEQAAAAHE LEKMQKSIHV KDDKIRLLEE bmy_08088T0/1-1460 KDIQNMNFLL KAEVQKLQAL ANEQAAAAHE LEKMQKSIHV KDDKIRLLEE BACU015367/1-1357 KDIQNMNFLL KAEVQKLQAL ANEQAAAAHE LEKMQKSIHV KDDKIRLLEE ENSTTRP00000001932/1-1357 KDIQNMNFLL KAEVQKLQAL ANEQAAAAHE LEKMQKSIHV KDDKIRLLEE 801 850 ENSP00000378725/1-1357 QLQHEISNKM EEFKILNDQN KALKSEVQKL QTLVSEQPNK DVVEQMEKCI ENSBTAP00000041243/1-1302 QLQCEISNKM EEFKILSDQN KALQLEVQKL QTLVSEQPNK DVLEQMERCI bmy_08088T0/1-1460 QLQCEISNKM EEFKILNDQN KALQLEVQKL QTLVSEQPNK DVLEQMERCI BACU015367/1-1357 QLQCEISNKM EEFKILNDQN KALQLEVQKL QTLVSEQPNK DVLEQMERCI ENSTTRP00000001932/1-1357 QLQCEISNKM EEFKILNDQK KALQLEVQKL QTLVSEQPNK DVLEQMERCI 851 900 ENSP00000378725/1-1357 QEKDEKLKTV EELLETGLIQ VATKEEELNA IRTENSSLTK EVQDLKAKQN ENSBTAP00000041243/1-1302 QEKDEKLKTV EELLETGLIQ VATKEEELNA IRTENSSLAK EVQDLKAKQN bmy_08088T0/1-1460 QEKDEKLKTV EELLETGLIQ VATKEEELNA IRTENSSLTK EVQDLKAKQN BACU015367/1-1357 QEKDEKLKTV EELLETGLIQ VATKEEELNA IRTENSSLTK EVQDLKAKQN ENSTTRP00000001932/1-1357 QEKDEKLKTV EELLETGLIQ VATKEEELNA IRTENSSLTK EVQDLKAKQN 901 950 ENSP00000378725/1-1357 DQVSFASLVE ELKKVIHEKD GKIKSVEELL EAELLKVANK EKTVQDLKQE ENSBTAP00000041243/1-1302 DQVSFASLVE ELKKVIHEKD GKIKSVEELL EAELLKVANK EKTIQDLKQE bmy_08088T0/1-1460 DQVSFASLVE ELKKVIHEKD GKIKSVEELL EAELLKVANK EKTIQDLKQE BACU015367/1-1357 DQVSFASLVE ELKKVIHEKD GKIKSVEELL EAELLKVANK EKTIQDLKQE ENSTTRP00000001932/1-1357 DQVSFASLVE ELKKVIHEKD GKIKSVEELL EAELLKVANK EKTIQDLKQE 951 1000 ENSP00000378725/1-1357 IKALKEEIGN VQLEKAQQLS ITSKVQELQN LLKGKEEQMN TMKAVLEEKE ENSBTAP00000041243/1-1302 IEALKEEIGN IQLEKAQQLS ITSQVQELQN LLKGKEEQMN NMKTVLEEKE bmy_08088T0/1-1460 IEALKEEIGN IQLEKAQQLS ITSQVQELQN LLKGKEEQMN TMKTVLEEKE BACU015367/1-1357 IEALKEEIGN IQLEKAQQLS ITSQVQELQN LLKGKEEQMN TMKTVLEEKE ENSTTRP00000001932/1-1357 IEALKEEIGN IQLEKAQQLS ITSQVQELQN LLKGKEEQMN TMKTVLEEKE 1001 1050 ENSP00000378725/1-1357 KDLANTGKWL QDLQEENESL KAHVQEVAQH NLKEASSASQ FEELEIVLKE ENSBTAP00000041243/1-1302 KDLHNRGRRL QDLQEENESL KTHVQEFAQH KFQEACSASQ FEELQIVLKE bmy_08088T0/1-1460 KDLANRGKWL QDLQEENESL KSHVQEVAQH NLREACSASR FEELEIV--- BACU015367/1-1357 KDLANRGKWL QDLQEENESL KAHVQEVAQH NLREACSASR FEELEIVLKE ENSTTRP00000001932/1-1357 KDLANKGKWL QDLQEENESL KAHVQEVAQH NLREACSASR FEELEIVLKE 1051 1100 ENSP00000378725/1-1357 KENELKRLEA MLKERESDLS SKTQLLQDVQ DENKLFKSQI EQLKQQNYQQ ENSBTAP00000041243/1-1302 KENEMKRLET MLKERESDLS SKTKLLQEVQ DENKLFKSQI EELKQQNYQQ bmy_08088T0/1-1460 ---------- -----ESDLS RKTKLLQEAQ DENKLFKSQI EELKQQNYQQ BACU015367/1-1357 KENEMKRLET VLKERESDLS RKTKLLQEAQ DENKLFKSQI EELKQQNYQQ ENSTTRP00000001932/1-1357 KENEMKRLET VVKERESDLS RKTKLLQEVQ DENKLFKSQI EELKQQNYQQ 1101 1150 ENSP00000378725/1-1357 ASSFPPHEEL LKVISEREKE ISGLWNELDS LKDAVEHQRK KNNDLREKNW ENSBTAP00000041243/1-1302 ASSFPPHEEL LKVISEREKE ITDLKNELDS LKDAVEHQRK KNNDLREKNW bmy_08088T0/1-1460 ASSFPPHEEL LKVISEREKE ITGLQNELAS LKDAVEHQRK KNNDLREKNW BACU015367/1-1357 ASSFPPHEEL LKVISEREKE ITGLQNELAS LKDAVEHQRK KNNDLREKNW ENSTTRP00000001932/1-1357 ASSFPPHEEL LKVISEREKE ITGLQNELAS LKDAVEHQRK KNNDLREKNW 1151 1200 ENSP00000378725/1-1357 EAMEALASTE KMLQDKVNKT SKERQQQVEA VELEAKEVLK KLFPKVSVPS ENSBTAP00000041243/1-1302 EAMEALASTE KLLQDKVNKT SKERQQHVEA VELEAKEVLK KLFPKVSVPS bmy_08088T0/1-1460 EAMEALASTE KMLQDKVNKT SKERQQHVEA VELEAKEVLK KLFPKVSVPS BACU015367/1-1357 EAMEALASTE KMLQDKVNKT SKERQQHVEA VELEAKEVLK KLFPKVSVPS ENSTTRP00000001932/1-1357 EAMEALASTE KMLQDKVNKT SKERQQHVEA VELEAKEVLK KLFPKVSVPS 1201 1250 ENSP00000378725/1-1357 NLSYGEWLHG FEKKAKECMA GTSGSEEVKV LEHKLKEADE MHTLLQLECE ENSBTAP00000041243/1-1302 NLD------- ---------- ---------- LEHKLKEADE MHTLLQLECE bmy_08088T0/1-1460 NLSYSEWLHG FEKRAKECVA GTSGSEEVKV LEHKLKEADE MHTLLQLECE BACU015367/1-1357 NLSYSEWLHG FEKRAKECVA GTSGSEEVKV LEHKLKEADE MHTLLQLECE ENSTTRP00000001932/1-1357 NLSYSEWLHG FEKRAKECVA GTSGSEEVKV LEHKLKEADE MHTLLQLECE 1251 1300 ENSP00000378725/1-1357 KYKSVLAETE GILQKLQRSV EQEENKWKVK VDESHKTIKQ MQSSFTSSEQ ENSBTAP00000041243/1-1302 KYKSVLAETE GILQKLQRSV EQEENKWKVK VDESQKTIKQ MQLSFTSLEQ bmy_08088T0/1-1460 KYKSVLAETE GILQKLQRSV EQEENKWKVK VDESQKTIKQ MQLSFTSSEQ BACU015367/1-1357 KYKSVLAETE GILQKLQRSV EQEENKWKVK VNESQKTIKQ MQLSFTSSEQ ENSTTRP00000001932/1-1357 KYKSVLAETE GILQKLQRSV EQEENKWKVK VDESQKTIKQ MQLSFTSSEQ 1301 1350 ENSP00000378725/1-1357 ELERLRSENK DIENLRRERE HLEMELEKAE MERSTYVTEV RELKDLLTEL ENSBTAP00000041243/1-1302 ELDRLRRENK DIENLRRERE HLEMELEKAE MERSTYVTEV RE-------- bmy_08088T0/1-1460 ELERLRRENK DIEHLRRERE HLEMELEKAE MERSTYVTEV RELKDLLTEL BACU015367/1-1357 ELERLRRESK DIENLRRERE HLEMELEKAE MERSTYVTEV RELKDLLTEL ENSTTRP00000001932/1-1357 ELERLRRENK DIENLRREQE HLEMELEKAE MERSTYVTEV RELKDLLTEL 1351 1400 ENSP00000378725/1-1357 QKKLDDSYSE AVRQNEELNL LKAQLNETLT KLRTEQNERQ KVAGDLHKAQ ENSBTAP00000041243/1-1302 ---------- ---------- LKKQLNETHA KLRTEQSERQ KVAGDLHKAQ bmy_08088T0/1-1460 QKKLDDSYSE AVRQNEELNL LKKQLNETLA KLRTEQSERQ KVAGDLHKAQ BACU015367/1-1357 QKKLDDSYSE AVRQNEELNL LKKQLNETLS KLRTEQSERQ KVAGDLHKAQ ENSTTRP00000001932/1-1357 QKKLDDSYSE AVRQNEELNL LKKQLNETLA KLRTEQSERQ KVAGDLHKAQ 1401 1450 ENSP00000378725/1-1357 QSLELIQSKI VKAAGDTTVI ENSDVSPETE SSEKETMSVS LNQTVTQLQQ ENSBTAP00000041243/1-1302 QSLDLIQSKI VKAAGDTTVI ENSDVSQETE SSEKETMSVS LNQTVTQLQQ bmy_08088T0/1-1460 QSLDLIQSKI VKAAGDTTVI ENSDVSPETE SSEKETMSVS LNQTVTQLQQ BACU015367/1-1357 QSLDLIQSKI VKAAGDTTVI ENSDVSPETE SSEKETMSVS LNQTVTQLQQ ENSTTRP00000001932/1-1357 QSLDLIQSKI VKAAGDTTVI ENSDVSPETE SSEKETMSVS LNQTVTQLQQ 1451 1500 ENSP00000378725/1-1357 LLQAVNQQLT KEKEHYQ--- -----VLE ENSBTAP00000041243/1-1302 LLQAVNQQLT KEKEHYQ--- -----VLE bmy_08088T0/1-1460 LLQAVNQQLT KEKEHYQSEV IGKLFIQG BACU015367/1-1357 LLQAVNQQLT KEKEHYQ--- -----VLE ENSTTRP00000001932/1-1357 LLQAVNQQLT KEKEHYQ--- -----VLE