KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:35 2014 Check: 00 .. Name: ENSBTAP00000041245/1-586 Len: 616 Check: 9998 Weight: 1.00 Name: ENSP00000363040/1-602 Len: 616 Check: 2313 Weight: 1.00 Name: ENSTTRP00000006745/1-598 Len: 616 Check: 356 Weight: 1.00 Name: bmy_04564T0/1-364 Len: 616 Check: 3644 Weight: 1.00 Name: BACU007303/1-343 Len: 616 Check: 8770 Weight: 1.00 // 1 50 ENSBTAP00000041245/1-586 ---------- ---------- ---------- AAASATSAGN VTGGGGAAGQ ENSP00000363040/1-602 MNGGAERAMR SLPSLGGLAL LCCAAAAAAA AVASAASAGN VTGGGGAAGQ ENSTTRP00000006745/1-598 MNGEAERAMR SLPSLGGLAL LCAAAAA--- AAASATSAGN VTGGGGATGQ bmy_04564T0/1-364 ---------- ---------- ---------- ---------- --MSGGQKIS BACU007303/1-343 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000041245/1-586 VDASPGPRLG GEPSHPFSKA TAPTAQAPRT GSPRATLHRP QAASSSAQPP ENSP00000363040/1-602 VDASPGPGLR GEPSHPFPRA TAPTAQAPRT GPPRATVHRP LAATSPAQSP ENSTTRP00000006745/1-598 VDASPGPGLG GEPSHPFSKA MAPTAQAPRT GPPNATVHRP LAASSSAQPL bmy_04564T0/1-364 VDQSGKSFMG RD-------- ---------- ---------- ---------- BACU007303/1-343 ---------- ---FIVF--- ---------- ---------- ---------- 101 150 ENSBTAP00000041245/1-586 ETTPPPTTAG PAPTTAAGPA RTTSQAPLVP SRVTPPAVER TPTTPWVTTR ENSP00000363040/1-602 ETTPLWATAG PSS------- -TTFQAPLGP SPTTPPAAER TSTTSQAPTR ENSTTRP00000006745/1-598 ATTPSRARAE PTP------- -TTFRAPLGP SPITPLAVER TGTTARATTR bmy_04564T0/1-364 ---------- ---------- ---------- ---------- ---------- BACU007303/1-343 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000041245/1-586 PAPTTLSTTT GPAPTTPVAT TVRAPTAPPN PTSALPGGGG GGGSSSSSVP ENSP00000363040/1-602 PAPTTLSTTT GPAPTTPVAT TVPAPTTPRT PTPDLPSSS- -----NSSVL ENSTTRP00000006745/1-598 PAPTTLSTTT GPAPTTPVAT TVPAPTTPPI PTSILPGGG- ------SSVP bmy_04564T0/1-364 ---------- ---------- ---------- ---------- ---------- BACU007303/1-343 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000041245/1-586 PTPPATEAPS PPPPEYVCNC SAVGSLGVNR CNQTTGQCEC QPGYQGLRCE ENSP00000363040/1-602 PTPPATEAPS SPPPEYVCNC SVVGSLNVNR CNQTTGQCEC RPGYQGLHCE ENSTTRP00000006745/1-598 PTPPATEAPS PPPPGYVCNC SVVGSLDVNR CNQTTGQCEC QPGYQGLRCE bmy_04564T0/1-364 ---------E PESRKNFE-- ---------- ---------- ---------- BACU007303/1-343 ---------- ----AFIC-- ---------- ---------- ---------- 251 300 ENSBTAP00000041245/1-586 TCTEGFYLNG TSGRCLPCDC NPRGALSTVC SSSGKCQCKV GVTGSSCDRC ENSP00000363040/1-602 TCKEGFYLNY TSGLCQPCDC SPHGALSIPC NSSGKCQCKV GVIGSICDRC ENSTTRP00000006745/1-598 TCKEGLYLNR TSRLCLPCDC SPRGALSILC NSSGKCQCKV GVTGSSCDRC bmy_04564T0/1-364 ---------- ---------- ---------- -SSGKCQCKV GVTGSSCDRC BACU007303/1-343 ---------- ---------- ---------- -SSGKCQCKV GVTGSSCDRC 301 350 ENSBTAP00000041245/1-586 QDGYYDFNEN GCLPCQCNNR SASCDALTGA CFNCQDNSEG DHCEECTEGF ENSP00000363040/1-602 QDGYYGFSKN GCLPCQCNNR SASCDALTGA CLNCQENSKG NHCEECKEGF ENSTTRP00000006745/1-598 QDGYYDFNKN GCLPCQCNNR SASCDALTGA CLNCQDNSRG DHCEECKEGF bmy_04564T0/1-364 QDGYYDFNKN GCLPCQCNNR SASCDALTGA CLNCQNNSRG DHCEECKEGF BACU007303/1-343 QDGYYDFNKN GCLPCQCNNR SASCDALTGA CLNCQNNSRG DHCEECKEGF 351 400 ENSBTAP00000041245/1-586 YQSPDGSKEC LRCPCSAVTS TGSCIIKLGE SEPECVQCKD GYTGQNCNDC ENSP00000363040/1-602 YQSPDATKEC LRCPCSAVTS TGSCSIKSSE LEPECDQCKD GYIGPNCNKC ENSTTRP00000006745/1-598 YQSPDATKEC LRCPCSAVTS TGSCIIKLGE LEPECVRCKD GYMGQNCNEC bmy_04564T0/1-364 YQSPDATKEC LRCPCSAVTS TGSCIIKLGE LKPECVRCKD GYMGQNCNEC BACU007303/1-343 YQSPDATKEC LRCPCSAVTS TGSCIIKLGE LKPECVRCKD GYMGQNCNEC 401 450 ENSBTAP00000041245/1-586 NHGYYNSDSI CVECQCHGHV DPVKTPRVCE PESGECISCL HNTTGFWCEN ENSP00000363040/1-602 ENGYYNFDSI CRKCQCHGHV DPVKTPKICK PESGECINCL HNTTGFWCEN ENSTTRP00000006745/1-598 DNGYYNSDSI CMECQCHGHV DPVKTPKICK PESGECIDCL HNTTGFWCEN bmy_04564T0/1-364 DNGYYNSDSI CMECQCHGHV DPVKTPKICK PESGECINCL HNTTGFWCEN BACU007303/1-343 DNGYYNSDSI CMECQCHGHV DPVKTPKICK PESGECINCL HNTTGFWCEN 451 500 ENSBTAP00000041245/1-586 CLDGYDRDLE GNCITKEVIV PTPEGSTILV SNASLTTSVP TPVINSTFTP ENSP00000363040/1-602 CLEGYVHDLE GNCIKKEVIL PTPEGSTILV SNASLTTSVP TPVINSTFTP ENSTTRP00000006745/1-598 CLEGYVQDLE GNCIKKEVIV PTPEDSTILV SNASLTTSVP TPVINSTFTP bmy_04564T0/1-364 CLEGYVQDLE GNCIKKEVIV PTPEGSTILV SNASLTTSVP TPVINSTFTP BACU007303/1-343 CLEGYVQDLE GNCIKKEVIV PTPEGSTILV SNASLTTSVP TPVINSTFTP 501 550 ENSBTAP00000041245/1-586 TTPQTIFSVS SAENSTSALA DVSWTQFNII ILTVIIIVVV LLMGFVGAVY ENSP00000363040/1-602 TTLQTIFSVS TSENSTSALA DVSWTQFNII ILTVIIIVVV LLMGFVGAVY ENSTTRP00000006745/1-598 TALQTIFSVS SAENSTSALA DVSWTQFNII ILTVIIIVVV LLMGFVGAVY bmy_04564T0/1-364 TTLQTIFSVS SAENSTSALA DVSWTQFNII ILTVIIIVVV LLMGFVGAVY BACU007303/1-343 TTLQTIFSVS SAENSTSALA DVSWTQFNII ILTVIIIVVV LLMGFVGAVY 551 600 ENSBTAP00000041245/1-586 MYREYQNRKL NAPFWTIELK EDNISFSSYH DSIPNADVSG LLEDDGNEVA ENSP00000363040/1-602 MYREYQNRKL NAPFWTIELK EDNISFSSYH DSIPNADVSG LLEDDGNEVA ENSTTRP00000006745/1-598 MYREYQNRKL NAPFWTIELK EDNISFSSYH DSIPNADVSG LLEDDGNEVA bmy_04564T0/1-364 MYREYQNRKL NAPFWTIELK EDNISFSSYH DSIPNADVSG LLEDDGNEVA BACU007303/1-343 MYREYQNRKL NAPFWTIELK EDNISFSSYH DSIPNADVSG LLEDDGNEVA 601 650 ENSBTAP00000041245/1-586 PNGQLTLTTP MHNYKA ENSP00000363040/1-602 PNGQLTLTTP IHNYKA ENSTTRP00000006745/1-598 PNGQLTLTTP IHNYKA bmy_04564T0/1-364 PNGQLTLTTP IHNYKA BACU007303/1-343 PNGQLTLTTP IHNYKA