KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:38 2014 Check: 00 .. Name: bmy_11705T0/1-154 Len: 189 Check: 3544 Weight: 1.00 Name: ENSP00000350757/1-142 Len: 189 Check: 3637 Weight: 1.00 Name: ENSBTAP00000041259/1-142 Len: 189 Check: 3637 Weight: 1.00 Name: ENSTTRP00000007824/1-153 Len: 189 Check: 5262 Weight: 1.00 Name: BACU015354/1-74 Len: 189 Check: 6321 Weight: 1.00 // 1 50 bmy_11705T0/1-154 MALLFTRRNV MWREEMGKDG GGGESLLKSN ITVHGPSESL VVCDVAEDLV ENSP00000350757/1-142 ---------- ---------- ---------- -----MSESL VVCDVAEDLV ENSBTAP00000041259/1-142 ---------- ---------- ---------- -----MSESL VVCDVAEDLV ENSTTRP00000007824/1-153 ---------- ---------- ---------- -----MSESL VVCDVAEDLV BACU015354/1-74 ---------- ---------- ---------- -----MSESL VVCDVAEDLV 51 100 bmy_11705T0/1-154 EKLRKFRFRK ETNNAAIIMK IDKDKRLVVL DEELE----- ---------- ENSP00000350757/1-142 EKLRKFRFRK ETNNAAIIMK IDKDKRLVVL DEELEGISPD ELKDELPERQ ENSBTAP00000041259/1-142 EKLRKFRFRK ETNNAAIIMK IDKDKRLVVL DEELEGISPD ELKDELPERQ ENSTTRP00000007824/1-153 EKLRKFRFRK ETNNAAIIMK IDKDKRLVVL DEELEGISPD ELKDELPERQ BACU015354/1-74 EKLRKFRFRK ETNNAAIIMK IDKDKRLVVL DEELEGISPD ELKDELPERQ 101 150 bmy_11705T0/1-154 ---------Y QHDDGRVSYP LCFIFSSPVG CKPEQQMMYA GSKNKLVQTA ENSP00000350757/1-142 PRFIVYSYKY QHDDGRVSYP LCFIFSSPVG CKPEQQMMYA GSKNKLVQTA ENSBTAP00000041259/1-142 PRFIVYSYKY QHDDGRVSYP LCFIFSSPVG CKPEQQMMYA GSKNKLVQTA ENSTTRP00000007824/1-153 PRFIVYSYKY QHDDGRVSYP LCFIFSSPVX XXXXXXXXXX XXXXXXXXXX BACU015354/1-74 PR-------- --------YP FLIVL----- ---------- ---------- 151 200 bmy_11705T0/1-154 ELTKVVFEIR NTEDLTEEWL REKL------ -----GFFH ENSP00000350757/1-142 ELTK-VFEIR NTEDLTEEWL REKL------ -----GFFH ENSBTAP00000041259/1-142 ELTK-VFEIR NTEDLTEEWL REKL------ -----GFFH ENSTTRP00000007824/1-153 XXXX-VFEIR NTEDLTEEWL REKLFSTNVN FCVSKVFMY BACU015354/1-74 ---------- ---------- ---------- ---------