KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:40 2014 Check: 00 .. Name: ENSTTRP00000007515/1-337 Len: 498 Check: 2015 Weight: 1.00 Name: ENSP00000270279/1-474 Len: 498 Check: 1593 Weight: 1.00 Name: ENSBTAP00000041264/1-491 Len: 498 Check: 8662 Weight: 1.00 Name: bmy_15576T0/1-316 Len: 498 Check: 7813 Weight: 1.00 Name: BACU018246/1-493 Len: 498 Check: 5094 Weight: 1.00 // 1 50 ENSTTRP00000007515/1-337 ---------- ---------- ---------- ---------- ---------- ENSP00000270279/1-474 MALAVAPWGR QWEEARALGR AVRMLQRLEE QCVDPRLSVS PPSLRDLLPR ENSBTAP00000041264/1-491 -MAAAALRGR QWGESRAFGR AVRLLQRLEE QCGDPRLSSS PPSLRDLLPR bmy_15576T0/1-316 -MAAAALRGR QWRESSAFGR AVSLLQRLEE QCGDPRLASS PPSLRDLLPR BACU018246/1-493 -MAAAALRGR QWRESNAFGR AVRLLQRLEE QCGDPRLASS PPSLRDLLPR 51 100 ENSTTRP00000007515/1-337 ---------- ---------- ---------- ---------- ---------- ENSP00000270279/1-474 TAQLLREVAH SRRAAGGGGP GGPGGSGDFL LIYLANLEAK SRQVAALLPP ENSBTAP00000041264/1-491 TAQLLRQVAQ ARREAGGGVP EGPGGPWDFL MVYLANLEAK SRQVAALLPP bmy_15576T0/1-316 TAQLLREVAH ARRAGGGGDP EGPGGAEDFL VVYLANLEAK SRQVAALLSP BACU018246/1-493 TAQLLREVAH ARRAGGGGGP EGPGGAEDFL VVYLANLEAK TRQVAALLPP 101 150 ENSTTRP00000007515/1-337 ---------- --------RQ LAKLTLIFSH MCAELGALFP GGKYCGHTYQ ENSP00000270279/1-474 RGRRSANDEL FRAGSRLRRQ LAKLAIIFSH MHAELHALFP GGKYCGHMYQ ENSBTAP00000041264/1-491 HGRKIANDEL FREGSRLRRQ LAKLALIFSY MHAELDALFP GGRYCGHTYQ bmy_15576T0/1-316 RGRKTANDEL FREGSRLRRQ LAKLTLIFSH MCTELGALFP GGKYCGNTYQ BACU018246/1-493 RGRKTANDEL FREGSRLRRQ LAKLTLIFSH MCTELGALFP GGKYCGNTYQ 151 200 ENSTTRP00000007515/1-337 LTKVPAHTFW RDHCGARCVL PWAEFELLLC LCHPVEPGCT TLALRSTIDL ENSP00000270279/1-474 LTKAPAHTFW RESCGARCVL PWAEFESLLG TCHPVEPGCT ALALRTTIDL ENSBTAP00000041264/1-491 LTKVSAHTFW RERCGARCVL PWAEFEAVLC ICHPVEPGST ALALRSTIDL bmy_15576T0/1-316 LTK------- ---------- ---------- ---------- ---------- BACU018246/1-493 LTEVLAHTFW REQCGARCVL PWAEFEVLLC ICHPMELGCT ALALRSTIDL 201 250 ENSTTRP00000007515/1-337 TCSGHVSMFE FDIFTRLFQP WPTLLKNWQL LAVNHPGYMA FLTYDEVRAR ENSP00000270279/1-474 TCSGHVSIFE FDVFTRLFQP WPTLLKNWQL LAVNHPGYMA FLTYDEVQER ENSBTAP00000041264/1-491 TCSGHVSIFE FDIFTRLFQP WPTLLKNWQL LAVNHPGYMA FLTYDEVQAR bmy_15576T0/1-316 ---------- ---------P WPTLLKNWQL LAVNHPGYMA LLTYDEVQAR BACU018246/1-493 TCSGHVSIFE FDIFTRLFQP WPTLLKNWQL LAVNHPGYMA LLTYDEVRAR 251 300 ENSTTRP00000007515/1-337 LQTYRDKPGS YVFRPSCTRP GQWAIGFVSS DGNILQTIPV NKPLFQALLE ENSP00000270279/1-474 LQACRDKPGS YIFRPSCTRL GQWAIGYVSS DGSILQTIPA NKPLSQVLLE ENSBTAP00000041264/1-491 LQTFRDKPGS YIFRPSCTRL GKWAIGYVSS DGSILQTIPL NKPLFQVLLE bmy_15576T0/1-316 LQTYRDKPGS YL-------- ---------- ---------- ---------- BACU018246/1-493 LQTYRDKPGS YIFQPSCTHP GQWAIGFVSS DGSILQTIPL NKPLFQALLE 301 350 ENSTTRP00000007515/1-337 GQKEGFYLYP DGKNHNPDLT ELCQMKPHQR VHVSEEQLQL YWAMDSTFEL ENSP00000270279/1-474 GQKDGFYLYP DGKTHNPDLT ELGQAEPQQR IHVSEEQLQL YWAMDSTFEL ENSBTAP00000041264/1-491 GQKEGFYLYP DGKNHNPDLT ELCHMEPHQH IHVSEEQLQL YWAMDSTFEL bmy_15576T0/1-316 --------YP DGKNHNPDLT ELCQMEPHQR IHVSEEQLQL YWAMDSTFEL BACU018246/1-493 GQKEGFYLYP DGKNRNPDLP EPCQMETHQR IHVSEEQLQL YWAMDSTFEL 351 400 ENSTTRP00000007515/1-337 CKICAESNKD VKVEPCGHLL CSRCLATWQX XXXXXXXXXX XXXXXXXXXX ENSP00000270279/1-474 CKICAESNKD VKIEPCGHLL CSCCLAAWQH SDSQTCPFCR CEIKGWEAVS ENSBTAP00000041264/1-491 CKICAESNKD VKIEPCGHLL CSRCLAAWLC SDSQTCPFCR CEIKGQEAVS bmy_15576T0/1-316 CKICAESNKD VKVEPCGHLL CSRCLATWQH SDSQTCPFCR CKIKGQEAVS BACU018246/1-493 CKICAESNKD VKVEPCGHLL CSRCLATWQH SDSQTCPFCR CKIKGQEAVR 401 450 ENSTTRP00000007515/1-337 XXXXXXXXXX XXXXXXXXXX XXXXXXXXVT PSPPPLPPRL DLPPESPRSK ENSP00000270279/1-474 IYQFHGQATA EDSGNSSDQE GRELELGQVP LSAPPLPPRP DLPPRKPRN- ENSBTAP00000041264/1-491 IHQFHVSATV EDPEHSSD-- --EEELEQMA PSGPPLPPRL DLCPKSPSSK bmy_15576T0/1-316 IHQFQASAPA EDSEDSSDKE DEEEELEQV- ---------- ---------- BACU018246/1-493 IYQFQASAPA EDSENSSDKE AEEEELERVT PSTPPLPPRL HLPPKSPRSK 451 500 ENSTTRP00000007515/1-337 YQLKV----- ---------- ---------- ---------- -------- ENSP00000270279/1-474 ---------- ---------- ---AQPKVRL LKGNSPPAAL GPQDPAPA ENSBTAP00000041264/1-491 GHLNVAPPTL PRLRAPLPLP RFWTAASAPW EVTSSPQARE GARGNS-- bmy_15576T0/1-316 ---------- ---------- ---------- ---------- -------- BACU018246/1-493 CQLKVAPLAL PRLRAPLTFP RFWTEPSASL EITSSPQARE GARG----