KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:51:41 2014 Check: 00 .. Name: BACU007920/1-339 Len: 452 Check: 8911 Weight: 1.00 Name: ENSBTAP00000041285/1-284 Len: 452 Check: 7962 Weight: 1.00 Name: bmy_09948T0/1-341 Len: 452 Check: 4934 Weight: 1.00 Name: ENSTTRP00000014471/1-282 Len: 452 Check: 1377 Weight: 1.00 // 1 50 BACU007920/1-339 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000041285/1-284 ---------- ---------- ---------- ---------- ---------- bmy_09948T0/1-341 DRACRTNSYR GTSRRCYRES KTSAPRPVRG TSVPLRKRGS ASAPICRTGV ENSTTRP00000014471/1-282 ---------- ---------- ---------- ---------- ---------- 51 100 BACU007920/1-339 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000041285/1-284 ---------- ---------- ---------- ---------- ---------- bmy_09948T0/1-341 SVRGPDAEGG PPTGARLRFL PFPGSIINFA SGPSLLVLPS YPSDSEAGGA ENSTTRP00000014471/1-282 ---------- ---------- ---------- ---------- ---------- 101 150 BACU007920/1-339 MAWNLT---- ---------T LVLPRGRYYV TKLGQRTALA RFRQAQLEEG ENSBTAP00000041285/1-284 MARNAE---- ---------- ---------- ---KAMTALA RFRQAQLEEG bmy_09948T0/1-341 VSENLQFPSG SAAPGAAKLP VLGPRGLRAA PSLAPWTALA RFRQAQLEEG ENSTTRP00000014471/1-282 -SRNLD---- ---------- ---------- ---DKRTALA RFRQAQLEEG 151 200 BACU007920/1-339 KVKERRPFLA SECTELPKAE KWRRQIIGEI SKKVAQIQNG YDIEWYFQET ENSBTAP00000041285/1-284 KVKERRPFLA SECTELPKAE KWRRQIIGEI SKKVAQIQN- ---------- bmy_09948T0/1-341 KVKERRPFLA SE-------- ---------- ---------- ---------- ENSTTRP00000014471/1-282 KVKERRPFLA SECTELPKAE KWRRQIIGEI SKKVAQIQN- ---------- 201 250 BACU007920/1-339 IGHFCFLAGL GEFRIRDLND EINKLLREKG HWEARIKELG GPDYGKVGPK ENSBTAP00000041285/1-284 -------AGL GEFRIRDLND EINKLLREKG HWEVRIKELG GPDYGKVGPK bmy_09948T0/1-341 -------SGL GEFRIRDLND EINKLLREKG HWEARIKELG GPDYG----- ENSTTRP00000014471/1-282 -------AGL GEFRIRDLND EINKLLREKG HWEARIKELG GPDYGKVGPK 251 300 BACU007920/1-339 MLDHEGKEVP GNRGYKYFGA AKDLPGVREL FEREPLPPPR KTRAELMKAI ENSBTAP00000041285/1-284 MLDHEGKEVP GNRGYKYFGA AKDLPGVREL FEKEPLPPPR KTRAELMKAI bmy_09948T0/1-341 ---------- ---------- ---------- ---------- -TRAELMKAI ENSTTRP00000014471/1-282 MLDHEGKEVP GNRGYKYFGA AKDLPGVREL FEREPLPPPR KTRAELMKAI 301 350 BACU007920/1-339 DFEYYGYLDE DDGVIVPLEQ EYEKKLRAEL VDKWKAEREA RLARGEKEEE ENSBTAP00000041285/1-284 DFEYYGYLDE DDGVIVPLEQ EYEKRHRAEL VEKWKAEREA RLARG----E bmy_09948T0/1-341 DFEYYGYLDE DDGVIVPLEQ EYEKKLRAEL VDKWKAEREA RLARGEK-EE ENSTTRP00000014471/1-282 DFEYYGYLDE DDGVIVPLEQ EYEKKLRAEL VDKWKAEREA RLARG----- 351 400 BACU007920/1-339 EEEEEEEEEV NIYAVTDEES DEEGGQEKGG EDGQQKFIAH VPVPSQQEFF ENSBTAP00000041285/1-284 EEEGEEEEEV NIYAVAEEES DEEGGPDGGG EDGRQKFIAH VPVPSQQE-- bmy_09948T0/1-341 EEEEEEEEEV NIYAVTDEES DEEGGQEKGG EDGQQKFIAH VPVPSQQE-- ENSTTRP00000014471/1-282 EEEEEEEEEA DIYAVADQES DEEGGQEKGG EDGQQKFIAH VPVPSQQE-- 401 450 BACU007920/1-339 NILQQALFCI KNTGRHGWCL VFVVFSTFVS DQGHVFIPSL GSSKERKLGR ENSBTAP00000041285/1-284 --IEEALVRR KK-------- -MELLQKYTS ET----LQAQ SEEARRLLGC bmy_09948T0/1-341 --IEEALVRR KK-------- -MELLQKYTS ET----LQAQ SEEARRLLGH ENSTTRP00000014471/1-282 --IEEALVRR KK-------- -MELLQKYTS ET----LQAQ SEEARRLLGY 451 500 BACU007920/1-339 YR ENSBTAP00000041285/1-284 -- bmy_09948T0/1-341 -- ENSTTRP00000014471/1-282 --