KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:51:42 2014 Check: 00 .. Name: ENSBTAP00000041320/1-987 Len: 1011 Check: 2878 Weight: 1.00 Name: ENSTTRP00000012089/1-987 Len: 1011 Check: 9173 Weight: 1.00 Name: bmy_09010T0/1-884 Len: 1011 Check: 4448 Weight: 1.00 Name: BACU013030/1-931 Len: 1011 Check: 2985 Weight: 1.00 // 1 50 ENSBTAP00000041320/1-987 MVSKSDQLLI VVSILEGRHF PKRPKHMLIV EAKFDGEQLA TDPVDHTDQP ENSTTRP00000012089/1-987 MVSKSDQLLI VVSILEGRHF PKRPKHMLVV EAKFDGEQLA TDPVDHTGQP bmy_09010T0/1-884 MVSKSDQLLI VVSILEGRHF PKRPKHMLVV EAKFDGEQLA TDPVDHTDQP BACU013030/1-931 ---------- ---------- ------MLVV EAKFDGEQLA TDPVDHTDHP 51 100 ENSBTAP00000041320/1-987 EFATELAWEI DRKALHQHRL QRTPIKLQCF ALDPSTSARE TIGYIVLDLR ENSTTRP00000012089/1-987 EFATELAWEI DRKALHQHRL QRTPIKLHCF ALDPLSSARE TIGYIVLDLR bmy_09010T0/1-884 EFATELAWEI DRKALHQHRL QRTPIKLHCF ALDPLSSSRE TIGYIVLDLR BACU013030/1-931 EFATELAWEI DRKALHQHRL QRTPIKLHCF ALDPLSSSRE TIGYIVLDLR 101 150 ENSBTAP00000041320/1-987 TAQETKQAPK WYQLLSNKYT KFKSEIQISI ALETDTKAPV DSFKAKGAPP ENSTTRP00000012089/1-987 TAQETKQAPK WYQLLSNKYT KFKSEIQISI ALETDTKAPV D-FKAKVXXX bmy_09010T0/1-884 TAQETKQAPK WYQLLSNKYT KFKSEIQISI ALETDTKAPV DSFKAKGAPP BACU013030/1-931 TAQETKQAPK WYQLLSNKYT KFKSEIQISI ALETDTKAPV DSFKAKGAPP 151 200 ENSBTAP00000041320/1-987 RDGKV-PASL SGLDPKDIVA VLNEEGGYHQ IGPAGYCTDF FIMSVTIAFA ENSTTRP00000012089/1-987 XXXXXXPAGL SGLDAKDIVA VLNEEGGYHQ IGPAEYCTDF FMMSVTIAFA bmy_09010T0/1-884 RDGRV-PASL SGLDAKDIVA VLNEEGGYHQ IGPAEYCTDF FVMSVTIAFA BACU013030/1-931 RDGRV-PASL SGLDTKDIVA VLNEEGGYHQ IGPAEYCTDF FVMSVTIAFA 201 250 ENSBTAP00000041320/1-987 TQLEQLIPCT MKLPERQPEF FFYYSLLGND VTNEPFSDLI NPNFEPERAS ENSTTRP00000012089/1-987 TQLEQLIPCT MKLPERRPEF FFYYSLLGND VTNEPFNDLI NPDFEPERAS bmy_09010T0/1-884 TQLEQLIPCT MKLPERRPEF FFYYSLLGND VTNEPFSDLI NPDFEPERAS BACU013030/1-931 TQLEQLIPCT MKLPERRPQF FFYYSLLGND VTNEPFSDLI NPDFEPERAS 251 300 ENSBTAP00000041320/1-987 VRIRSSIEIL RVYLTLHSKL QIHLCCGDQS LGSTEIPLTG LLKKGSTEIN ENSTTRP00000012089/1-987 VRIRSSIEIL RVYLALQSKL QIHLCCGDQS LGSTEIPLTG LLKKGSTEIN bmy_09010T0/1-884 VRIRSSIAIL RVYLALQSKL QIHLCCGDQS LGSTEIPLTG LLKKGSTEIN BACU013030/1-931 VRIRSSIEIL RVYLALQSKL QIHLCCGDQS LGSTEIPLTG LLKKGSTEIN 301 350 ENSBTAP00000041320/1-987 HRPVTVEGAF TLDPPNRAKQ KLAPIPVELA PTVGVSVALQ REGMDVQS-- ENSTTRP00000012089/1-987 HRPVTVEGAF ILDPPNRAKQ KLAPVPVDLA PTVGVSVALQ REGLDAQS-- bmy_09010T0/1-884 HRPVTVEGAF TLDPPNRAKQ KLAPVPVDLA PTVGVSVALQ REGIDAQASS BACU013030/1-931 HRPVTVEGAF TLDPPNRAKQ KLAPVPVDLA PTVGVSVALQ REGIDAQA-- 351 400 ENSBTAP00000041320/1-987 ---------- ---------- -LIELKTQNE HEPHHSKKRV LTPIKENTHT ENSTTRP00000012089/1-987 ---------- ---------- -LIELKTQNE HEPHHSKKTV FTPTKEKTHT bmy_09010T0/1-884 DPPSPPPASS INTDLLCIAL SLIELKTQNE HEPHHSKKTV FTPTKEKTHT BACU013030/1-931 ---------- ---------- ---------- ---------- --------SS 401 450 ENSBTAP00000041320/1-987 GPQSPSESPV PPHNQSPPTK DDATESEVES LLYDKDTKLN PKAISSSVPA ENSTTRP00000012089/1-987 GVKSPRMSPV PPHSQSPPTR DNATESEVES LQYDKDTKPN PKAVSSSEPA bmy_09010T0/1-884 GPKSPRVSPV PPHSQSPPTR DDATESEVES LQYDKDTKPN PKAVSSSEPA BACU013030/1-931 DPPSP---PP ASSIQSPPTR DDATESEVES LQYDKDTKPN PKAVNSSEPA 451 500 ENSBTAP00000041320/1-987 LLAKPVTTSI ASEAASGQKI AVPATSHHFC FSIDLRSIHD LEVGFPINCI ENSTTRP00000012089/1-987 LLAQPVTTSI ASGTASGQKI AVPATSHHFC FSIDLRSIRD LEVGFPVNCI bmy_09010T0/1-884 LLAQPVTTSI ASGTASGQKI AVPATSHHFC FSIDLRSIRD LEVGFPVNCI BACU013030/1-931 LLAQPVTTSI ASGTASGQKI AVPATSHHFC FSIDLRSIRD LEVGFPVNCI 501 550 ENSBTAP00000041320/1-987 LRYSYPFFGS AAPIMTNPPV EVRKNMEVFL PQSYCAFDFA TLPHQLQDTF ENSTTRP00000012089/1-987 LRYSYPFFGS AAPIMTNPPI EVRKNMEVFL PQSYCAFDFA TMPHQLQDTF bmy_09010T0/1-884 LRYSYPFFGS AAPIMTNPPI EVRKNMEVFL PQSYCAFDFA TMPHQLQDTF BACU013030/1-931 LRYSYPFFGS AAPIMTNPPI EVRKNMEVFL PQSYCAFDFA TMPHQLQDTF 551 600 ENSBTAP00000041320/1-987 LRIPLLVELW HKDKMSKDLL LGIARIQLSN ILSSEKTRFL GSNGEQCWRQ ENSTTRP00000012089/1-987 LRIPLLVELW HKDKMSKDLL LGIARIQLSN ILSSEKTRFL GSNGEQCWRQ bmy_09010T0/1-884 LRIPLLVELW HKDKMSKDLL LGIARIQLSN ILSSEKTRFL GSNGEQCWRQ BACU013030/1-931 LRIPLLVELW HKDKMSKDLL LGIARIQLSN ILSSEKTRFL GSNGEQCWRQ 601 650 ENSBTAP00000041320/1-987 TFSESVPIVA TQGSNNRIVD LSYTVTLEDY GLVKMREIFV SDSSQGLSAV ENSTTRP00000012089/1-987 TFSESVPIIA AQGSNNRIVD LSYTVTLEDY GLVKMREIFV SDSSQGVSAV bmy_09010T0/1-884 TFSESVPIIA AQGSNNRIVD LSYTVTLEDY GLVKMREIFV SDSSQGLSAV BACU013030/1-931 TFSESVPIIA AQGSNNRIVD LSYTVTLEDY GLVKMREIFV SDSSQGLSAV 651 700 ENSBTAP00000041320/1-987 QQKPSSVPPA PCPSEIQTEP RETLEYKAAL ELEMWKEMQE DIFENQLKQK ENSTTRP00000012089/1-987 QQKPSSVPPA PCPSEIQTEP RETLEYKAAL ELEMWKEMQE DIFENQLKQK bmy_09010T0/1-884 QQKPSSLPPA PCPSEIQTEP RETLEYKAAL ELEMWKEMQE DIFENQLKQK BACU013030/1-931 QQKPSSVPPA PCPSEIQTEP RETLEYKAAL ELEMWKEMQE DIFENQLKQK 701 750 ENSBTAP00000041320/1-987 ELAHMQALAE EWKKRDRERE SLVKKKVAEY NILEGKLQKT LIDLEKREQQ ENSTTRP00000012089/1-987 ELAHMQALAE EWKKRDRERE SLVKKKVAEY TVLEGKLQKT LVDLEKREQQ bmy_09010T0/1-884 ELAHMQALAE EWKKRDRERE SLVKKKVAEY TILEGKLQKT LVDLEKREQQ BACU013030/1-931 ELAHMQALAE EWKKRDRERE SLVKKKVAEY TILEGKLQKT LVDLEKREQQ 751 800 ENSBTAP00000041320/1-987 LAIAESELQR ERRELKSERE RNLQELQDSI RRAKEDCVHQ VELERLKMKQ ENSTTRP00000012089/1-987 LALAESELQR ERRELKSERE RNLQELQDSI RRAKEDCVHQ VELERLKMKQ bmy_09010T0/1-884 LAIAESELQR ERRELKSERE RNLQELQDSI RRAKEDCVHQ IELERLKMKQ BACU013030/1-931 LAIAESELQR ERRELKSERE RNLQELQDSV RRAKEDCVHQ IELERLKMKQ 801 850 ENSBTAP00000041320/1-987 LEEDKHRLQQ QLNDAENKYK TLEKEFHQFK DQQSSKPEIR LQSEINLLTL ENSTTRP00000012089/1-987 LEEDKHRLQQ QLNDAENKYK ILEKEFHQFK DQQSSKPEIR LQSEINLLTL bmy_09010T0/1-884 LEEDKQRLQQ QLSDAENKYK ILEKEFHQFK DQQSSKPEIR LQSEINLLTL BACU013030/1-931 VEEDKHRLQQ QLNDAENKYK ILEKEFHQFK DQQSSKPEIR LQSEINLLTL 851 900 ENSBTAP00000041320/1-987 EKVELERKLE SATKSKLHYK QQWGRALKEL ARLKQREQES QMARLKKQQE ENSTTRP00000012089/1-987 EKVELERKLE STTKSKLHYK QQWGRALKEL ARLKQREQES QMARLKKQQE bmy_09010T0/1-884 EKVELERKLE SATKSKLHYK QQWGRALKEL ARLKQ----- ---------- BACU013030/1-931 EKVELERKLE SATKSKLHYK QQWGRALKEL ARLKQREQES QMARLKKQQE 901 950 ENSBTAP00000041320/1-987 ELEQMRLRYL AAEEKDTVKT ERQELLDIRN ELNRLRQQEQ KQYPDSREIA ENSTTRP00000012089/1-987 ELEQMRLRYL AAEEKDTVNT ERQELLDIRN ELNRLRQQEQ KQYQDSREIA bmy_09010T0/1-884 ---------- ---------- ---------- ---------- ---------- BACU013030/1-931 ELEQMRLRYL AAEEKDTVNT ERQELLDIRN ELNRLRQQEQ KQYQDSREIA 951 1000 ENSBTAP00000041320/1-987 SGKMDGPHGS ALEEGLDDYL TRLIEERDTL MRTGVYNHED RIISELDRQI ENSTTRP00000012089/1-987 SGKMDGPHGS ALEEGLDDYL TRLIEERDTL MRTGVYNHED RIISELDRQI bmy_09010T0/1-884 ---------- ---------- ---------- ---------- ---------- BACU013030/1-931 SGKMDGPHGS ALEEGLDDYL TRLIEERDTL MRTGVYNHED RIISELDRQI 1001 1050 ENSBTAP00000041320/1-987 REVLAKNNAS N ENSTTRP00000012089/1-987 GEILAKNNAS N bmy_09010T0/1-884 ---------- - BACU013030/1-931 GEILAKNNAS N