KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:43 2014 Check: 00 .. Name: bmy_19259T0/1-226 Len: 363 Check: 2842 Weight: 1.00 Name: ENSP00000359793/1-359 Len: 363 Check: 5811 Weight: 1.00 Name: ENSBTAP00000041321/1-362 Len: 363 Check: 414 Weight: 1.00 Name: BACU014795/1-304 Len: 363 Check: 9899 Weight: 1.00 Name: ENSTTRP00000008874/1-359 Len: 363 Check: 4631 Weight: 1.00 // 1 50 bmy_19259T0/1-226 MSTNNSKQPV SPAAGLLSNT TCQIEEELSI SFSITFMTVG ILSNSLAIAI ENSP00000359793/1-359 MSMNNSKQLV SPAAALLSNT TCQTENRLSV FFSVIFMTVG ILSNSLAIAI ENSBTAP00000041321/1-362 MSTNSSIQPV SPESELLSNT TCQLEEDLSI SFSIIFMTVG ILSNSLAIAI BACU014795/1-304 MSTNNSKQPV SPAAGLLSNT TCQMEEELSI SFSITFMTVG ILSNSLAIAI ENSTTRP00000008874/1-359 MSTNNSKQPV SPAAGLLSNT TCQMEEELSI SFSITFMTVG ILSNSLAIAI 51 100 bmy_19259T0/1-226 LMKAYQRFRQ KYKSSFLLLA SALVITDFFG HLINGAIAVF VYASDKDWIH ENSP00000359793/1-359 LMKAYQRFRQ KSKASFLLLA SGLVITDFFG HLINGAIAVF VYASDKEWIR ENSBTAP00000041321/1-362 LMKAYQRFRQ KYKSSFLLLA SALVITDFFG HLINGTIAVF VYASDKDWIY BACU014795/1-304 LMKAYQRFRQ KYKSSFLLLA SALVITDFFG HLINGAIAVF VYASDKDWIH ENSTTRP00000008874/1-359 LMKAYQRFRQ KYKSSFLLLA SALVITDFFG HLINGAIAVF VYASDKDWIH 101 150 bmy_19259T0/1-226 FDKSNVLCT- ---------- ---------- ---------- ---------- ENSP00000359793/1-359 FDQSNVLCSI FGICMVFSGL CPLLLGSVMA IERCIGVTKP IFHSTKITSK ENSBTAP00000041321/1-362 FDKSNILCSI FGICMVFSGL CPLFLGSLMA IERCIGVTKP IFHSTKITTK BACU014795/1-304 FDKSNVLCSI FGICMVFSGL CPLFLGSVMA IERCIGVTQP IFHSTKITSK ENSTTRP00000008874/1-359 FDKSNVLCSI FGICMVFSGL CPLFLGSVMA IERCIGVTQP IFHSTKITSK 151 200 bmy_19259T0/1-226 ---------- ---------- ---------- ---------- ---------- ENSP00000359793/1-359 HVKMMLSGVC LFAVFIALLP ILGHRDYKIQ ASRTWCFYNT EDIKDWEDRF ENSBTAP00000041321/1-362 HVKMMLSGVC FFAVFVALLP ILGHRDYKIQ ASRTWCFYKT DEIKDWEDRF BACU014795/1-304 HVKMMLSGVC FFAVFVALLP ILGHRDYKIQ ASKTWCFYNT DHIKDWEDRF ENSTTRP00000008874/1-359 HVKMMLSGVC FFAVFVALLP ILGHRDYKIQ ASKTWCFYKT DHIKDWEDRF 201 250 bmy_19259T0/1-226 ---------- --LGISFFCN AITGISLLRV KFKSQQHRQG RSHHFEMVIQ ENSP00000359793/1-359 YLLLFSFLGL LALGVSLLCN AITGITLLRV KFKSQQHRQG RSHHLEMVIQ ENSBTAP00000041321/1-362 YLLLFAFLGL LALGISFVCN AITGISLLKV KFRSQQHRQG RSHHFEMVIQ BACU014795/1-304 YLLLFSFLGL LALGISFFCN AITGISLLRV KFKSQQHRQG RSHHFEMVIQ ENSTTRP00000008874/1-359 YLLLFSFLGL LALGISFFCN AITGISLLRV KFKSQQHRQG RSHHFEMVIQ 251 300 bmy_19259T0/1-226 LLGIMCVSCV CWSPFLELKF RNVAQFFMSD LFGYSCIAAD LRGDLSETVL ENSP00000359793/1-359 LLAIMCVSCI CWSPFL-VTM ANIGINGNHS LETCETTLFA LRMATWNQIL ENSBTAP00000041321/1-362 LLGIMCVSCI CWSPFL-VTM ASIGMNIQDF KDSCERTLFT LRMATWNQIL BACU014795/1-304 LLGIMCVSCV CWSPFL---V RTYGFDNFCF V--------- -------QLI ENSTTRP00000008874/1-359 LLGIMCVSCV CWSPFL-VTM ASIGMNRQDF MGACERTLFT LRMATWNQIL 301 350 bmy_19259T0/1-226 AG---FLCEE GVVPGLE--- ---CGSS--N DDVWRKDCMT ---------- ENSP00000359793/1-359 DPWVYILLRK AVLKNLYKLA SQCCGVHVIS LHIWELSSIK NSLKVAAISE ENSBTAP00000041321/1-362 DPWVYILLRK AVLRNLYVCT RRCCGVHVIS LHVWELSSIK NSLKVAAISD BACU014795/1-304 D----IQYKV SCLFKVGSLD GQCCFIF--- ---------- ---------- ENSTTRP00000008874/1-359 DPWVYILLRK AVLKSLYTFT RRCCGVHIIS LHVWELSSIK NSLKVAAISE 351 400 bmy_19259T0/1-226 ---------- --- ENSP00000359793/1-359 SPVAEKSAST --- ENSBTAP00000041321/1-362 LPVTEKVTQQ TST BACU014795/1-304 ---------- --- ENSTTRP00000008874/1-359 SPVTEKSAST ---