KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:51:45 2014  Check: 00 ..

 Name: ENSBTAP00000041338/1-265  Len:    268  Check:  6903  Weight:  1.00
 Name: ENSTTRP00000012729/1-264  Len:    268  Check:  3976  Weight:  1.00
 Name: bmy_12893T0/1-266         Len:    268  Check:  7758  Weight:  1.00
 Name: BACU000704/1-201          Len:    268  Check:  2153  Weight:  1.00

//


                          1                                                   50
ENSBTAP00000041338/1-265  MAQNTLTVNG VDVGSVLSQP THIDIHIHQE SALAQLLKAG SSLVERLSHR 
ENSTTRP00000012729/1-264  MTQNMLAVNG VDVVSPLSQP THIDIHIHQE SALAQLLKAG SSLMKHLSHH 
bmy_12893T0/1-266         MTQNMLVVNG VDVASTLSQP THIDIHIHQE SALAQLLKAG SSLMEHLSHR 
BACU000704/1-201          MTQNMLVVNG VDVASTLSQP THIDIHIHQE SALAQLLKAG SSLMEHLSHR 


                          51                                                 100
ENSBTAP00000041338/1-265  PAKARIGYGQ LALGVTQLLL GAISCALGGL LYLGPWIQLR ASGCALWAGF 
ENSTTRP00000012729/1-264  PAKASISYGQ LAVGVTQILL GAMSCALGGL LCLGPWIQLR DSGCAFWAGF 
bmy_12893T0/1-266         PAKARIGYGQ LALGVTQILL GATSCALGGL LYLGPWIQLR ASGCAFWAGF 
BACU000704/1-201          PAKARIGYGQ LALGVTQILL GATSCALGGL LYLGPWIQLR ASGCAFWAGF 


                          101                                                150
ENSBTAP00000041338/1-265  VAIAAGVGAI VHEKRRGKLS GCVSGLLTLA GIATAVAAVV FCVNSFIWQY 
ENSTTRP00000012729/1-264  VAIAAGVGTI VHEKHCGKLS GFISSLLTLA GIATAVAAVV FCVNSLTWEP 
bmy_12893T0/1-266         VAIAAGVGAV VHEKHWGKLS GCISSLLTLA GIGTAVAAVV FCVNSLTWQP 
BACU000704/1-201          VAIVAGVGAV VHEKHWGKLS GCISSLLTLA GIGTAVAAVV FCVNSLTWQP 


                          151                                                200
ENSBTAP00000041338/1-265  DGFYDISSVC DSLVPVTPTS WYQ---RRSS YSSWEEENCR RYMQMLMDLF 
ENSTTRP00000012729/1-264  -VFYDISSVY DSSIPDTSNF GYEETRRSDS YSSWREERCR GYMQMLTDLF 
bmy_12893T0/1-266         DIFYDISSVC DSLVPATPTF GYQQTERSNS YSSWKEKRCR NYMQMLMDLF 
BACU000704/1-201          DVFYDISSVC DSLVPATPTF GYQQTGRSNS YSSWKEERCR NYMQMLM--- 


                          201                                                250
ENSBTAP00000041338/1-265  LGIRALLLAI CALQVTVSLA SLGVGLQSFC GQSSRALQDE EGSERNLLGE 
ENSTTRP00000012729/1-264  LGIRGLLLAI CVLQVIVSLA SLGMGLRRFC GQSSRAL-DE EGSEKKLWGE 
bmy_12893T0/1-266         LGIRGLLLAV CVLQVIASLA SLGVGLRCFC GQSSRAL-DE EGSEEKLWGK 
BACU000704/1-201          --------VI CS-------- ---------- ---------- ---------- 


                          251                                                300
ENSBTAP00000041338/1-265  NSVPPSPSKE KTTAVIVL 
ENSTTRP00000012729/1-264  -SVLPSPHKE KSTAVVG- 
bmy_12893T0/1-266         NSVPPSSHKE KSTAVVL- 
BACU000704/1-201          ---------- --------