KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:47 2014 Check: 00 .. Name: bmy_20197T0/1-344 Len: 619 Check: 4089 Weight: 1.00 Name: ENSP00000254730/1-596 Len: 619 Check: 7584 Weight: 1.00 Name: ENSBTAP00000041364/1-589 Len: 619 Check: 7475 Weight: 1.00 Name: BACU007927/1-478 Len: 619 Check: 9532 Weight: 1.00 Name: ENSTTRP00000000938/1-585 Len: 619 Check: 6345 Weight: 1.00 // 1 50 bmy_20197T0/1-344 ---------- ---------- ---------- ---------- ---------- ENSP00000254730/1-596 MAGRRVNVNV GVLGHIDSGK TALARALSTT ASTAAFDKQP QSRERGITLD ENSBTAP00000041364/1-589 MAGRRVNVNV GVLGHIDSGK TALARALSTT ASTAAFDKQP QSRERGITLD BACU007927/1-478 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000938/1-585 MAGRRVNVNV GVLGHIDSGK TALARALSTT ASTAAFDKQP QSRERGITLD 51 100 bmy_20197T0/1-344 ---------- ---------- ---------- ---------- ---------- ENSP00000254730/1-596 LGFSCFSVPL PARLRSSLPE FQAAPEAEPE PG-EPLLQVT LVDCPGHASL ENSBTAP00000041364/1-589 LGFSCFSVPL PAHLRP---- ---APGAGPE PEPEPRLQVT LVDCPGHASL BACU007927/1-478 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000938/1-585 LGFSCFSVPL PARLRP---- --APLGAEPE PGAEPRLQVT LVDCPGYASL 101 150 bmy_20197T0/1-344 ---------- ---------- ---------- ---------- ---------- ENSP00000254730/1-596 IRTIIGGAQI IDLMMLVIDV TKGMQTQSAE CLVIGQIACQ KLVVVLNKID ENSBTAP00000041364/1-589 IRTIIGGAQI IDLMMLVIDV TKGMQTQSAE CLVIGQIACQ KLVVVLNKTD BACU007927/1-478 ---------- ---MMLVIDV TKGMQTQSAE CLVIGQIACQ KLVVVLNKTD ENSTTRP00000000938/1-585 IRTVIGGAQI IDLMMLVIDV TKGMQTQSAE CLVIGQIACQ KLVVVLNKTD 151 200 bmy_20197T0/1-344 ---------- ---------- ---------- ---------- ---------- ENSP00000254730/1-596 LLPEGKRQAA IDKMTKKMQK TLENTKFRGA PIIPVAAKPG GPEAPETEAP ENSBTAP00000041364/1-589 LLPEGKKQAA IDRMTKKMQK TLESTKFRGA PVIPVAAKPG GPDAPETEAP BACU007927/1-478 LLPEGKRQAA IDKMTKKMQK TLENTKFRGA PIIPVAARPG GPDAPETEAP ENSTTRP00000000938/1-585 LLPEGKRQAA IDKMTKKMQK TLENTKFRGA PIIPVAARPG GPDAPETEAP 201 250 bmy_20197T0/1-344 ---------- ---------- ---------- ---------- ---------- ENSP00000254730/1-596 QGIPELIELL TSQISIPTRD PSGPFLMSVD HCFSIKGQGT VMTGTILSGS ENSBTAP00000041364/1-589 QGIPELIELL TSQISIPTRD PSGPFLMSVD HCFSIKGQGT VMTGTILSGS BACU007927/1-478 QGIPELIELL TSQISIPRRD PSGPFLMSVD HCFSIKGQGT VMTGTILSGS ENSTTRP00000000938/1-585 QGIPELIELL TSQISIPRRD PSGPFLMSVD HCFSIKGQGT VMTGTILSGS 251 300 bmy_20197T0/1-344 ---------- ---------- MQMFHTPVTS AVQGDRLGIC VTQFDPKLLE ENSP00000254730/1-596 ISLGDSVEIP ALKVVKKVKS MQMFHMPITS AMQGDRLGIC VTQFDPKLLE ENSBTAP00000041364/1-589 VSLGDSVEIP ALKVVRKVKS MQMFHTPVSS AVQGDRLGIC VTQFDPKLLE BACU007927/1-478 VSLGDSVEIP TLKVVRKVKS MQMFHTPVTS AVQGDRLGIC VTQFDPRLLE ENSTTRP00000000938/1-585 VSLGDSVEIP TLKVVRKVKS MQMFHTPVTS AVQGDRLGIC VTQFDPKLLE 301 350 bmy_20197T0/1-344 RGLVCAPESL HTVHAALVSV EKIPYFRGSL QTKAKFHITV GHETVMGRVM ENSP00000254730/1-596 RGLVCAPESL HTVHAALISV EKIPYFRGPL QTKAKFHITV GHETVMGRLM ENSBTAP00000041364/1-589 RGLVCAPESL HTVHAALISV EKIPYFRGPL QTKAKFHITV GHETVMGRVM BACU007927/1-478 RGLVCAPESL HTVHAALVSV EKIPYFRGSL QTKAKFHITV GHETVMGRVM ENSTTRP00000000938/1-585 RGLVCAPESL HTVHAALVSV EKIPYFRGSL QTKAKFHITV GHETVMGRVM 351 400 bmy_20197T0/1-344 FFSPAPDSFD HEPVLDSFDF SQEYLFQEQY LCPGSVPAET DGGEADRRVG ENSP00000254730/1-596 FFSPAPDNFD QEPILDSFNF SQEYLFQEQY LSKDLTPAVT DNDEADKKAG ENSBTAP00000041364/1-589 FFGPAPDSLD REPVLDSFDF SREYLFQEQY LCPGPDPAAA HAAKADEKAG BACU007927/1-478 FFSPAPDSFD HEPVLDSFDF SQEYLFQEQY LCPGSVPAET DRGEADSRVG ENSTTRP00000000938/1-585 FFSPAPDGFD HEPVLDSFDF SQEYLFQEQY LCPGSVPAET DGGEADRRVG 401 450 bmy_20197T0/1-344 QASEGRCPRQ QWALVEFEKP VTCPRLCLVI GSRLDADIHA NTCRLAFHGV ENSP00000254730/1-596 QATEGHCPRQ QWALVEFEKP VTCPRLCLVI GSRLDADIHT NTCRLAFHGI ENSBTAP00000041364/1-589 QVLAGRCPQQ QWALVEFEKP VTCPRLCLVI GSRLDADIHA NTCRLAFHGV BACU007927/1-478 QASEGRCPRQ QWALVEFEKP VTCPRLCLVI GSRLDADIHA NTCRLAFHGV ENSTTRP00000000938/1-585 QASEGRCPRQ QWALVEFEKP VTCPRLCLVI GSRLDADIHA NTCRLAFHGV 451 500 bmy_20197T0/1-344 LLHGLEDKNY AESALPKLRV YKLKHKHGIV ERVMDDYSVI GRSLFKKETN ENSP00000254730/1-596 LLHGLEDRNY ADSFLPRLKV YKLKHKHGLV ERAMDDYSVI GRSLFKKETN ENSBTAP00000041364/1-589 LLHGLEDRNY AESALPTLRV YKLKQKHGVV ERVLDDHSVI GRSLFKKETN BACU007927/1-478 LLHGLEDRNY AESALPALRV YKLKHKHGIV ERVMDDYSVI GRSLFKKETN ENSTTRP00000000938/1-585 LLHGLEDKNY AESALPRLRV YKLKHKHGIV ERVMDDYSVI GRSLFKKETN 501 550 bmy_20197T0/1-344 IQLFVGLKVH LSTGELGVIA SAFGQSGKFK VHVPGECGHF F--LLTGAVQ ENSP00000254730/1-596 IQLFVGLKVH LSTGELGIID SAFGQSGKFK IHIPGGLSPE SKKILTPALK ENSBTAP00000041364/1-589 IQLFVGLRVQ LSTGELGVID SAFGQSGKFK VHVPGGLSPE SKKILTSALK BACU007927/1-478 IQLFVGLKVH LSTGELGVIA SAFGQSGKFK VHVPGGLSPE SKKILTPALK ENSTTRP00000000938/1-585 IQLFVGLKVQ LSTGELGVIA SAFGQSGKFK VHIPGDLSPE SKKILTPTLK 551 600 bmy_20197T0/1-344 GRWRWHPNTA PRL---GVSA RPCQRRGLSP HGTVASGPAT CGWKASVCPG ENSP00000254730/1-596 KRARAGRGEA TRQEESAERS EPSQHVVLS- ---------- LTFKRYVFDT ENSBTAP00000041364/1-589 KRGRAGRGEA AKPEE-AERP EPAQPVGLS- ---------- LSFKRYVFDA BACU007927/1-478 KRGRAGRGEE ------AEQP EPVQHVALS- ---------- LSFKRYVFDT ENSTTRP00000000938/1-585 KRGRAGRGEE ------AGQP EPVQHVALS- ---------- LSFKRYVFDT 601 650 bmy_20197T0/1-344 GAWCGPGIWS DRPLHHPVA ENSP00000254730/1-596 ---------H KRMVQSP-- ENSBTAP00000041364/1-589 ---------H KRMVQSP-- BACU007927/1-478 ---------H KRMVQSP-- ENSTTRP00000000938/1-585 ---------H KRMVQSP--