KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:48 2014 Check: 00 .. Name: ENSTTRP00000011540/1-841 Len: 962 Check: 1275 Weight: 1.00 Name: ENSP00000332737/1-842 Len: 962 Check: 287 Weight: 1.00 Name: ENSBTAP00000041373/1-886 Len: 962 Check: 4622 Weight: 1.00 Name: bmy_08391T0/1-901 Len: 962 Check: 2807 Weight: 1.00 Name: BACU002870/1-954 Len: 962 Check: 2766 Weight: 1.00 // 1 50 ENSTTRP00000011540/1-841 ---------- ---------- --MAVRSGLW ---------- --PAFLGIVL ENSP00000332737/1-842 ---------- ---------- --MAVRPGLW ---------- --PALLGIVL ENSBTAP00000041373/1-886 ---------- ---------- ---------- ---------- ---------- bmy_08391T0/1-901 MGAEMGGPLH PLASLNSLRP -GAASSPILL KGIQPAGLEA AEPGPTGCLL BACU002870/1-954 MSPDRCCVL- ---ALPYLSP QGAAASPILW KGTQPAGLEA AEPGPTGCLL 51 100 ENSTTRP00000011540/1-841 ---------- ---------- ------AAWL RGSGAQQSAT VAN----PVP ENSP00000332737/1-842 ---------- ---------- ------AAWL RGSGAQQSAT VAN----PVP ENSBTAP00000041373/1-886 ---------- ---------- ------ALFA PTTGAQQSAT VANPVPNPVP bmy_08391T0/1-901 LAQSQPLNRQ VTPGGPHKSS RGPSSPAPFA SAAGAQQSAT VAN----PVP BACU002870/1-954 LAQSQPLNRQ VTPGGPHKSS RGPSSPAPFA SAAGAQQSAT VAN----PVP 101 150 ENSTTRP00000011540/1-841 GSNPDLLPHF LVEPEDVYIV KNKPVLLVCK AMPATQIFFK CNGEWVRQVD ENSP00000332737/1-842 GANPDLLPHF LVEPEDVYIV KNKPVLLVCK AVPATQIFFK CNGEWVRQVD ENSBTAP00000041373/1-886 GSNPDLLPHF LVEPEDVYIV KNKPVLLVCK ATPATQIFFK CNGEWVRQVD bmy_08391T0/1-901 GSNPDLLPDF LVEPEDVYIV KNKPVLLVCK AMPATQIFFK CNGEWVRQVD BACU002870/1-954 GSNPDLLPDF LVEPEDVYIV KNKPVLLVCK AMPATQIFFK CNGEWVRQVD 151 200 ENSTTRP00000011540/1-841 HVIERSMDGS SGLPAMEVRI NVSRQQVEKV FGLEEYWCQC VAWSSSGTTK ENSP00000332737/1-842 HVIERSTDGS SGLPTMEVRI NVSRQQVEKV FGLEEYWCQC VAWSSSGTTK ENSBTAP00000041373/1-886 HVIERSTDGS SGLPSMEVRI NVSRQQVEKV FGLEEFWCQC VAWSSSGTTK bmy_08391T0/1-901 HVIERSTDGS SGLPAMEVRI NVSRQQVEKV FGLEEYWCQC VAWSSSGTTK BACU002870/1-954 HVIERSTDGS SGLPAMEVRI NVSRQQVEKV FGLEEYWCQC VAWSSSGTTK 201 250 ENSTTRP00000011540/1-841 SQKAYIRIAY LRKNFEQEPL AKEVSLEQGI VLPCRPPEGI PPAEVEWLRN ENSP00000332737/1-842 SQKAYIRIAY LRKNFEQEPL AKEVSLEQGI VLPCRPPEGI PPAEVEWLRN ENSBTAP00000041373/1-886 SQKAYIRIAY LRKNFEQEPL AKEVSLEQGI VLPCRPPEGI PPAEVEWLRN bmy_08391T0/1-901 SQKAYIRIAY LRKNFEQEPL AKEVSLEQGI VLPCRPPEGI PPAEVEWLRN BACU002870/1-954 SQKAYIRIAY LRKNFEQEPL AKEVSLEQGI VLPCRPPEGI PPAEVEWLRN 251 300 ENSTTRP00000011540/1-841 EDLVDPSLDP NVYITREHSL VVRQARLADT ANYTCVAKNI VARRRSASAA ENSP00000332737/1-842 EDLVDPSLDP NVYITREHSL VVRQARLADT ANYTCVAKNI VARRRSASAA ENSBTAP00000041373/1-886 EDLVDPSMDP NVYITREHSL VVRQARLADT ANYTCVAKNI VARRRSASAA bmy_08391T0/1-901 EDLVDPSLDP NVYITREHSL VVRQARLADT ANYTCVAKNI VARRRSASAA BACU002870/1-954 EDLVDPSLDP NVYITREHSL VVRQARLADT ANYTCVAKNI VARRRSASAA 301 350 ENSTTRP00000011540/1-841 VIVYV----- ---------- ---------- ---------- ---------- ENSP00000332737/1-842 VIVYV----- ---------- ---------- ---------- ---------- ENSBTAP00000041373/1-886 VIVYVNGGWS TWTEWSVCSA SCGRGWQKRS RSCTNPAPLN GGAFCEGQNV bmy_08391T0/1-901 VIVYV----- ---------- ---------- ---------- ---------- BACU002870/1-954 VIVYVNGGWS TWTEWSVCSA SCGRGWQKRS RSCTNPAPLN GGAFCEGQNV 351 400 ENSTTRP00000011540/1-841 ---------- -DGSWSPWSK WSACGLDCTH WRSRECSDPA PRNGGEECRG ENSP00000332737/1-842 ---------- -DGSWSPWSK WSACGLDCTH WRSRECSDPA PRNGGEECQG ENSBTAP00000041373/1-886 QKTACATLCP VDGSWSPWSK WSACGLDCTH WRSRECSDPA PRNGGEECQG bmy_08391T0/1-901 ---------- -DGSWSPWSK WSACGLDCTH WRSRECSDPA PRNGGEECRG BACU002870/1-954 QKTACATLCP VDGSWSPWSK WSACGLDCTH WRSRECSDPA PRNGGEECRG 401 450 ENSTTRP00000011540/1-841 TDLDTRNCTS DLCVHTASGP EDVALYVGLV AVAVCLLLLL LVLILVYCRK ENSP00000332737/1-842 TDLDTRNCTS DLCVHTASGP EDVALYVGLI AVAVCLVLLL LVLILVYCRK ENSBTAP00000041373/1-886 TDLDTRNCTS DLCVHTASGP EDVALYVGLI AVAVCLLLLL LVLILVYCRK bmy_08391T0/1-901 TDLDTRNCTS DLCVHTASGP EDVALYVGLI AVAVCLLLLL LVLILVYCRK BACU002870/1-954 TDLDTRNCTS DLCVHTASGP EDVALYVGLI AVAVCLLLLL LVLILVYCRK 451 500 ENSTTRP00000011540/1-841 KEGLDSDVAD SSILTSGFQP VSIKPSKADN PHLLTIQPDL STTTTTYQGS ENSP00000332737/1-842 KEGLDSDVAD SSILTSGFQP VSIKPSKADN PHLLTIQPDL STTTTTYQGS ENSBTAP00000041373/1-886 KEGLDSDVAD SSILTSGFQP VSIKPSKADS PHLLTIQPDL STTTTTYQGS bmy_08391T0/1-901 KEGLDSDVAD SSILTSGFQP VSIKPSKADN PHLLTIQPDL STTTTTYQGS BACU002870/1-954 KEGLDSDVAD SSILTSGFQP VSIKPSKADN PHLLTIQPDL STTTTTYQGS 501 550 ENSTTRP00000011540/1-841 LCPRQDGPSP KFQLTNGHLL SPLGGGRHTL HHSSPTSEAE DFVSRLSTQN ENSP00000332737/1-842 LCPRQDGPSP KFQLTNGHLL SPLGGGRHTL HHSSPTSEAE EFVSRLSTQN ENSBTAP00000041373/1-886 LCPRQDGPSP KFQLTNGHLL SPLGSGRHTL HHSSPTSEAE DFVSRLSTQN bmy_08391T0/1-901 LCPRQDGPSP KFQLTNGHLL SPLGGGRHTL HHSSPTSEAE DFVSRLSTQN BACU002870/1-954 LCPRQDGPSP KFQLTNGHLL SPLGGGRHTL HHSSPTSEAE DFVSRLSTQN 551 600 ENSTTRP00000011540/1-841 YFRSLPRGSS NMAYGTFNFL GGRLMIPNTX XXXXXXXXXX XXXXXXXXXX ENSP00000332737/1-842 YFRSLPRGTS NMTYGTFNFL GGRLMIPNTG ISLLIPPDAI PRGKIYEIYL ENSBTAP00000041373/1-886 YFRSLPRGTS NMAYGTFNFL GGRLMIPNTG ISLLIPPDAI PRGKIYEIYL bmy_08391T0/1-901 YFRSLPRGSS NMAYGTFNFL GGRLMIPNTG ISLLIPPDAI PRGKIYEIYL BACU002870/1-954 YFRSLPRGSS NMAYGTFNFL GGRLMIPNTG ISLLIPPDAI PRGKIYEIYL 601 650 ENSTTRP00000011540/1-841 XXXXXXXXRL PLAGCQTLLS PIVSCGPPGV LLTRPVILAM DHCGEPSPES ENSP00000332737/1-842 TLHKPEDVRL PLAGCQTLLS PIVSCGPPGV LLTRPVILAM DHCGEPSPDS ENSBTAP00000041373/1-886 TLHKPEDVRL PLAGCQTLLS PIVSCGPPGV LLTRPVILTM DHCGEPSPES bmy_08391T0/1-901 TLHKPEDVRL PLAGCQTLLS PIVSCGPPGV LLTRPVILAM DHCGEPSPES BACU002870/1-954 TLHKPEDVRL PLAGCQTLLS PIVSCGPPGV LLTRPVVLAM DHCGEPSPES 651 700 ENSTTRP00000011540/1-841 WSLHLKKQSC EGSWEDVLHL GEEAPSHLYY CQLEAGACYV FTEQLGRFAL ENSP00000332737/1-842 WSLRLKKQSC EGSWEDVLHL GEEAPSHLYY CQLEASACYV FTEQLGRFAL ENSBTAP00000041373/1-886 WSLRLKKQSC EGSWEDVLHL GEEAPCHLYY CQLEAGACYV FTEQLGRFAL bmy_08391T0/1-901 WSLHLKKQSC EGSWEDVLHL GEEAPSHLYY CQLEAGACYV FTEQLGRFAL BACU002870/1-954 WSLHLKKQSC EGSWEDVLHL GEEAPSHLYY CQLEAGACYV FTEQLGRFAL 701 750 ENSTTRP00000011540/1-841 VGEALSVAAA KRLKLLLFAP VACTSLEYNI RVYCLHDTHD ALKEVVQLEK ENSP00000332737/1-842 VGEALSVAAA KRLKLLLFAP VACTSLEYNI RVYCLHDTHD ALKEVVQLEK ENSBTAP00000041373/1-886 VGEALSVAAA KRLKLLLFAP VACTSLEYNI RVYCLHDTHD ALKEVVQLEK bmy_08391T0/1-901 VGEALSVAAA KRLKLLLFAP VACTSLEYNI RVYCLHDTHD ALKEVVQLEK BACU002870/1-954 VGEALSVAAA KRLKLLLFAP VACTSLEYNI RVYCLHDTHD ALKEVVQLEK 751 800 ENSTTRP00000011540/1-841 QLGGQLIQEP RILHFKDSYH -LRLSIHDVP SSLWKSKLLV SYQEIPFYHI ENSP00000332737/1-842 QLGGQLIQEP RVLHFKDSYH NLRLSIHDVP SSLWKSKLLV SYQEIPFYHI ENSBTAP00000041373/1-886 QLGGQLIQEP RVLHFKDSYH NLRLSIHDVP SSLWKSKLLV SYQEIPFYHI bmy_08391T0/1-901 QLGGQLIQEP RILHFKDSYH NLRLSIHDVP SSLWKSKLLV SYQEIPFYHI BACU002870/1-954 QLGGQLIQEP RILHFKDSYH NLRLSIHDVP SSLWKSKLLV SYQEIPFYHI 801 850 ENSTTRP00000011540/1-841 WNGTQQYLHC TFTLERVSPS TSDLACKVWV WQVEGDGQSF NINFNITKDT ENSP00000332737/1-842 WNGTQRYLHC TFTLERVSPS TSDLACKLWV WQVEGDGQSF SINFNITKDT ENSBTAP00000041373/1-886 WNGTQQYLHC TFTLERVSPS TSDLACKVWV WQVEGDGQSF NVNFNITKDT bmy_08391T0/1-901 WNGTQQYLHC TFTLERVSPS TSDLACKVWV WQVEGDGQSF NINFNITKDT BACU002870/1-954 WNGTQQYLHC TFTLERVSPS TSDLACKVWV WQVEGDGQSF NINFNITKDT 851 900 ENSTTRP00000011540/1-841 RFAELLALES EGGLPALVGP SAFKIPFLIR QKIITSLDPP CSRGADWRTL ENSP00000332737/1-842 RFAELLALES EAGVPALVGP SAFKIPFLIR QKIISSLDPP CRRGADWRTL ENSBTAP00000041373/1-886 RFSELLVLES EGGVPALVGP SAFKIPFLIR QKIITSLDPP CSRGADWRTL bmy_08391T0/1-901 RFAELLALES EGGVPALVGP SAFKIPFLIR QKIITSLDPP CSRGADWRTL BACU002870/1-954 RFAELLALES EGGVPALVGP SAFKIPFLIR QKIITSLDPP CSRGADWRTL 901 950 ENSTTRP00000011540/1-841 AQKLHLDSHL SFFASKPSPT AMILNLWEAR HFPNGNLSQL AAAVAGLGQP ENSP00000332737/1-842 AQKLHLDSHL SFFASKPSPT AMILNLWEAR HFPNGNLSQL AAAVAGLGQP ENSBTAP00000041373/1-886 AQKLHLDSHL SFFASKPSPT AMILNLWEAR HFPNGNLSQL AAAVAGLGQP bmy_08391T0/1-901 AQKLHLDSHL SFFASKPSPT AMILNLWEAR HFPNGNLSQL AAAVAGLGQP BACU002870/1-954 AQKLHLDSHL SFFASKPSPT AMILNLWEAR HFPNGNLSQL AAAVAGLGQP 951 1000 ENSTTRP00000011540/1-841 DAGLFTVSEA EC ENSP00000332737/1-842 DAGLFTVSEA EC ENSBTAP00000041373/1-886 DAGLFTVSEA EC bmy_08391T0/1-901 DAGLFTVSEA EC BACU002870/1-954 DAGLFTVSEA EC