KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:51:48 2014 Check: 00 .. Name: ENSBTAP00000041377/1-543 Len: 543 Check: 3904 Weight: 1.00 Name: ENSTTRP00000000805/1-539 Len: 543 Check: 5638 Weight: 1.00 Name: bmy_12902T0/1-542 Len: 543 Check: 3587 Weight: 1.00 Name: BACU000715/1-542 Len: 543 Check: 3814 Weight: 1.00 // 1 50 ENSBTAP00000041377/1-543 MRRPRGEPGS RAPRPTEGAT CAGPGESWSP APNSMLRVLL SAQASSARLS ENSTTRP00000000805/1-539 MRRPRGELGP RAPRPTEGAI CAGPGEPWSP SPNSMLRVLL SAQASSARLS bmy_12902T0/1-542 MRRPRGELGP RAPRATEGAI CAGPGEPWSP SPNSMLRVLL SAQASSARLS BACU000715/1-542 MRRPRGELGP RAPRPTEGAI CAGPGEPWSP SPNSMLRVLL SAQASSARLS 51 100 ENSBTAP00000041377/1-543 GLLLLPPVQP CCLGPSKWGD HWPPGGGPHA GPVQGLQRLL EQARSPGELL ENSTTRP00000000805/1-539 GLLLLPPVQP YCLGPNKWGD R-PPGGAPHA GPVQGLQRLL EQARSPGELL bmy_12902T0/1-542 GLLLLSPVQP YCLGPSKWGD R-PPGGAPHA GPVQGLQRLL EQARSPGELL BACU000715/1-542 GLLLLSPVQP YCLGPGKWGD R-PPGGAPHA GPVQGLQRLL EQARSPGELL 101 150 ENSBTAP00000041377/1-543 RWLGQNPTKV RAHHYPVALR RLSQLLGSLP QPPPVEQATL QDLSQLIIRN ENSTTRP00000000805/1-539 RWLGQNPTKV RAHHYPVALR RLGQLLGSQP RPPPVEQATL QDLSQLIIRN bmy_12902T0/1-542 RWLGQNPTKV RAHHYPVALR RLGQLLGSQP RPPPVEQATL QDLSQLIIRN BACU000715/1-542 RWLGQNPTKV RAHHYPVALR RLGQLLGSQP RPPPVEQATL QDLSQLIIRN 151 200 ENSBTAP00000041377/1-543 CPSFDIHTIH VCLHLAALLG FPSDGPLMCA LEQERRFRLP PKPPPPLPSI ENSTTRP00000000805/1-539 CPSFDIHTIH VCLHLAVLLG FPSDGP-VCA LEQEQRFRLP PKPPPPLQ-M bmy_12902T0/1-542 CPSFDIHTIH VCLHLAVLLG FPSDGPLVCA LEQEQRFRLP PKPPRPLQPV BACU000715/1-542 CPSFDIHTIH VCLHLAVLLG FPSDGPLVCA LEQEQRFRLP PKPPRPLQPV 201 250 ENSBTAP00000041377/1-543 LRGGQRLEAA LSCPRFQRRP QQHLIRSLAE ASPEELTPHV MVLLAQHLAR ENSTTRP00000000805/1-539 LRGGLRLEAA LSCPRFQRHP QHHLIRSLAE ARPEELTPHV MVLLAQHLAR bmy_12902T0/1-542 LRGGLRLEAA LSCPRVQRHP QQHLIRSLAE ARPEDLTPHV MVLLAQHLAR BACU000715/1-542 LRGGLRLEAA LSCPRVQRHP QQHLIRSLAE ARPEDLTPHV MVLLAQHLAR 251 300 ENSBTAP00000041377/1-543 HRLREPQLLE AIAHFLVVQE AQLNSKVVQK LVLPFGRLNY VPLEQQFMPC ENSTTRP00000000805/1-539 HRLREPQLLE AIAHFLVAQE AQLNSKVVQK LVLPFGRLNY LPLEEQFMPC bmy_12902T0/1-542 HRLREPQLLE AIAHFLVAQE AQLNSKVVQK LVLPFGRLNY LPLEQQFMPC BACU000715/1-542 HRLREPQLLE AIAHFLVAQE AQLNSKVVQK LVLPFGRLNY LPLEQQFMPC 301 350 ENSBTAP00000041377/1-543 LERILAREAG VAPLATVNIL MSLCQLQCLP FQALHFVFSP GFINHISGTP ENSTTRP00000000805/1-539 LERILAREAG VAPLATVNIL MSLCQLRCLP FRALHFVFSP GFISHISGTP bmy_12902T0/1-542 LERILAREAG VAPLATVNIL MSLCQLRCLP FRALHFVFSP GFISHISGTP BACU000715/1-542 LERILAREAG VAPLATVNIL MSLCQLRCLP FRALHFVFSP GFISHISGTP 351 400 ENSBTAP00000041377/1-543 HALIVRRYLS LLDTAVELEL PGYRGARLPR RQQVPIFPQP LITDRARCKY ENSTTRP00000000805/1-539 HALIVRRYLS LLDTAVELEL PGYRGPRLPR RQQVPIFPQP LITDRARCKY bmy_12902T0/1-542 HALIVRRYLS LLDTAVELEL PGYRGPRLPR RQQVPIFPQP LITDRARCKY BACU000715/1-542 HALIVRRYLS LLDTAVELEL PGYRGPRLPR RQQVPIFPQP LITDRARCKY 401 450 ENSBTAP00000041377/1-543 SHKDIVAEGL RQLLGEEKYR QDLTVPPGYS TDFLLCVSSC GSVLPVRAQD ENSTTRP00000000805/1-539 SHKDIVAEGL RQLLGEEKYR QDLTVPPGYC TDFLLCVSSS GAVLPVRTQD bmy_12902T0/1-542 SHKDIVAEGL RQLLGEEKYR QDLTVPPGYC TDFLLCVSSS GAVLPVRTQD BACU000715/1-542 SHKDIVAEGL RQLLGEEKYR QDLTVPPGYC TDFLLCVSSS GAVLPVRTQD 451 500 ENSBTAP00000041377/1-543 PFLPYPPRSC PHATRDPAQR VVLMLRERWH FCRDGRVLLG SRALRERHLG ENSTTRP00000000805/1-539 PFLPYPPRSC PYTTRDPAQR VVLMLRERWH FCRDGRVLLG SQALRERHLG bmy_12902T0/1-542 PFLPYPPRSC PCTTRDPAQR VVLMLRERWH FCRDGRVLLG SRALRERHLG BACU000715/1-542 PFLPYPPRSC PYTTRDPAQR VVLMLRERWH FCRDGRVLLG SRALRERHLG 501 550 ENSBTAP00000041377/1-543 LMGYQLLPLP FEELESQRGL PQLKSYLRQK LQTLGLRWGP EGG ENSTTRP00000000805/1-539 LMGYQLLPLP FEELESQRGL PQLKSYLRQK LQALGLR-EP ERG bmy_12902T0/1-542 LMGYQLLPLP FEELESQRGL PQLKSYLRQK LQALGLRWGP EGG BACU000715/1-542 LMGYQLLPLP FEELESQRGL PQLKSYLRQK LQALGLRWGP EGG