KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:49 2014 Check: 00 .. Name: ENSBTAP00000041378/1-449 Len: 686 Check: 8814 Weight: 1.00 Name: ENSP00000406485/1-512 Len: 686 Check: 4425 Weight: 1.00 Name: ENSTTRP00000001961/1-445 Len: 686 Check: 3175 Weight: 1.00 Name: bmy_17542T0/1-388 Len: 686 Check: 8159 Weight: 1.00 Name: BACU017241/1-649 Len: 686 Check: 7842 Weight: 1.00 // 1 50 ENSBTAP00000041378/1-449 ---------- --------ME QKAGKSSEDG ATVPPAAEAP EPAGSGGSAE ENSP00000406485/1-512 MLPGAVGESD CSAEAREKME QKEGKLSEDG TTVSPAADNP EMSGGGAPA- ENSTTRP00000001961/1-445 ---------- --------ME QKEGKPSEDG TPVSPTTEVP ETVGGGASAE bmy_17542T0/1-388 ---------- --------ME KKEGKPSEDG TPVSPATEVP ETVGGGASAE BACU017241/1-649 ---------- --------ME KKEGKPSEDG TPVSPATEVP ETVGGGASAE 51 100 ENSBTAP00000041378/1-449 EETAGPAESA ARAGPAT-AG QQERAPAEDA VSAECQADGL G--------- ENSP00000406485/1-512 EETKGTAGKA INEGPPTESG KQEKAPAEDG MSAELQGEAN GLDEVKVESQ ENSTTRP00000001961/1-445 EEATGPAERT ITEGPPDGAG KQERAPAEDS ITAEFQGEQR ---------- bmy_17542T0/1-388 EEATGPAERT ITEGPTDGAR KQERAPAEDK ISAEFQGESK G--------- BACU017241/1-649 EEATGPAERT ITEGPPDGAG KQERAPAEGS ISAEFQGESK G--------- 101 150 ENSBTAP00000041378/1-449 -EVKAESQGE VELQQEDPGQ GETA-AAHGK TDRKDQTDSE PEGAEGDRET ENSP00000406485/1-512 REAGGKEDAE AELKKEDGEK EETTVGSQEM TGRKEETKSE PKEAEEK-ES ENSTTRP00000001961/1-445 ---------E AELQKEDSRK KETTVAPQEM ADWKEETNSE PKETEGKEEI bmy_17542T0/1-388 ---------E AELQKEDSGK KETTVAPQEM AERKEETNSE PKEAEGKEET BACU017241/1-649 ---------E AELQKEDRGK QETTVAPQEM AERKEETNSE PKEAEGKEET 151 200 ENSBTAP00000041378/1-449 ASASEEQSAD EKEARLGSRE TVDASREVQ- ---------- ---------- ENSP00000406485/1-512 TLASEKQKAE EKEAKPESGQ KADANDRDK- ---------- ---------- ENSTTRP00000001961/1-445 TLASEKQQAD EKEAKPGSRE KANVNDEAK- ---------- ---------- bmy_17542T0/1-388 TLASEKQKAD EKEAKPGSRE KAN------- ---------- ---------- BACU017241/1-649 TLASENQKAD EKEAKPGSRE KAKVSDEAQA AGEQEDKAGG REAAGKEEAK 201 250 ENSBTAP00000041378/1-449 ---------- ---------- ---------- ---------- ---------- ENSP00000406485/1-512 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001961/1-445 ---------- ---------- ---------- ---------- ---------- bmy_17542T0/1-388 ---------- ---------- ---------- ---------- ---------- BACU017241/1-649 AGGREAKGKE EAMAGGREAA GKEEAKGSRE KAKVSDEAQA AGEQEDKAGG 251 300 ENSBTAP00000041378/1-449 ---------- ---------- ---AEPKQAS GAQEAEAGGG EAEGPQ---- ENSP00000406485/1-512 ---------- ---------- ---PEPKATV EEEDAKTASQ EETGQRKECS ENSTTRP00000001961/1-445 ---------- ---------- ---AGDREAA GNEEAKAGDR EAAGKE---- bmy_17542T0/1-388 ---------- ---------- ---------- ---------- ---------- BACU017241/1-649 REAAGKEEAK AGGREADGKE EAMAGGREAA GKEEAKAGGR EADGKE-EAM 301 350 ENSBTAP00000041378/1-449 ---------- ------EEGG KTEEPQAEAR EEAGAPAAQP DS-------- ENSP00000406485/1-512 TEPKEKATDE EAKAESQKAV VEDEAKAEPK EPDGKEEAKH GAKEEADAKE ENSTTRP00000001961/1-445 ---------- -------EAA GKEEAKAGDR EAAGKEEAKA GDREAA---- bmy_17542T0/1-388 ---------- ---------- ---------- ---------- ---------- BACU017241/1-649 AGGREAEGKE EAMAGGREAA GKEEAKAGGR EAAGKEEAKA GGREAAGKEE 351 400 ENSBTAP00000041378/1-449 ---------- ---------- ---------- ---------- ---------- ENSP00000406485/1-512 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001961/1-445 ---------- ---------- ---------- ---------- ---------- bmy_17542T0/1-388 ---------- ---------- ---------- ---------- ---------- BACU017241/1-649 AMAVGREAAG KEEAKAGASE AAGKEEATVA PQKESDKTEE PKAEAQEKAS 401 450 ENSBTAP00000041378/1-449 ---------- ---------- ---------- -----EPGSP DEEQDQGAGA ENSP00000406485/1-512 ---------- ---------- -------EAE DAEEAEPGSP SEEQEQDVEK ENSTTRP00000001961/1-445 ---------- ---------- ---------- -----EPGCP DEEQDQGAEK bmy_17542T0/1-388 ---------- ---------- ---------- -----EPGCP DEEQDQGVEE BACU017241/1-649 APETKSDSQK KTAVEDEAKP EPQEEVVKEE VKEEVEPGWP DEEQDQGVEE 451 500 ENSBTAP00000041378/1-449 EAEDGAGGPP SSPEGWPESP TEEGGSASPE GLSPDTAASE ELGPSASDSS ENSP00000406485/1-512 EPEGGAGVIP SSPEEWPESP TGEGHNLSTD GLGPDCVASG QTSPSASESS ENSTTRP00000001961/1-445 GAEEGAGALP RSAEEWPESP TEEGSGLSPD GLSPDTAASG ETSPSASESS bmy_17542T0/1-388 ESEEGAGVLP GSAEEWPESP TEEGSSLSPD GLSPDTAAFG ETSPSASESS BACU017241/1-649 ESEEGARELP SSAEEWPESP TEEGSGLSPD GLGPDTAASG ETSPSASDSS 501 550 ENSBTAP00000041378/1-449 PSDVPQSPTE PPPSEEKKKE KAPERRVSAP TRPRGPRAQN RKAIVDKFGG ENSP00000406485/1-512 PSDVPQSPPE SPSSGEKK-E KAPERRVSAP ARPRGPRAQN RKAIVDKFGG ENSTTRP00000001961/1-445 PSDVSQSPTE PPPSQEKKED KAPERRVSAP ARPRGPRAQN RKAIVDKFGG bmy_17542T0/1-388 PSDVSQSPTE PPPSQEKKKE KAPERRVSAP ARPRGPRAQN RKAIVDKFGG BACU017241/1-649 PSDVSPSPTE PPPSQEKKKE KAPERRVSAP ARPRGPRAQN RKAIVDKFGG 551 600 ENSBTAP00000041378/1-449 AAAGPTALFR NTKAAGAAVG GVRNMLLEWC RAMTRSYEHV DIQNFSSSWG ENSP00000406485/1-512 AASGPTALFR NTKAAGAAIG GVKNMLLEWC RAMTKKYEHV DIQNFSSSWS ENSTTRP00000001961/1-445 AASSPTALFR NTKAAGAAIG GVKNMLLEWC RAMTRSYEHV DIQNFSSSWS bmy_17542T0/1-388 AASGPTALFR NTKAAGAAVG GVKNMLLEWC RAMTRSYEHV DIQNFSSSWS BACU017241/1-649 AASGPTALFR NTKAAGAAVG GVKNMLLEWC RAMTRSYEHV DIQNFSSSWS 601 650 ENSBTAP00000041378/1-449 SGMAFCALIH KFFPDAFDYA ALDPAQRRHN FTLAFSTAEK LADCAQLLEV ENSP00000406485/1-512 SGMAFCALIH KFFPDAFDYA ELDPAKRRHN FTLAFSTAEK LADCAQLLDV ENSTTRP00000001961/1-445 SGMAFCALIH KFFPDAFDYA ALDPAKRRHN FSLAFSTAEK LADCAQLLEV bmy_17542T0/1-388 SGMAFCALIH KFFPDAFDYA ALDPAKRRHN FSLAFSTAEK LADCAQLLEV BACU017241/1-649 SGMAFCALIH KFFPDAFDYA ALDPAKRRHN FSLAFSTAEE LADCAQLLEV 651 700 ENSBTAP00000041378/1-449 DDMVRLAVPD SKCVYTYIQE LYRSLVQKGL VKTKKK ENSP00000406485/1-512 DDMVRLAVPD SKCVYTYIQE LYRSLVQKGL VKTKKK ENSTTRP00000001961/1-445 DDMVRLAVPD SKCVYTYIQE LYRSLVQKGL VKTKKK bmy_17542T0/1-388 DDMVRLAVPD SKCVYTYIQE LYRSLVQKGL VKTKKK BACU017241/1-649 DDMVRLAVPD SKCVYTYIQE LYRSLVQKGL VKTKKK