KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:58 2014 Check: 00 .. Name: ENSP00000345512/1-1030 Len: 1049 Check: 5064 Weight: 1.00 Name: ENSBTAP00000041442/1-1029 Len: 1049 Check: 2318 Weight: 1.00 Name: ENSTTRP00000004607/1-1032 Len: 1049 Check: 9402 Weight: 1.00 Name: bmy_07265T0/1-671 Len: 1049 Check: 4935 Weight: 1.00 Name: BACU014985/1-1044 Len: 1049 Check: 930 Weight: 1.00 // 1 50 ENSP00000345512/1-1030 MRSEALLLYF TLLHFAGAGF PEDSEPISIS HGNYTKQYPV FVGHKPGRNT ENSBTAP00000041442/1-1029 MRSEALLLYF TLLHCAGAAF PEDSEPISIS HGNYTKQYPV FVGHKPGRNT ENSTTRP00000004607/1-1032 MRSEALLLYF TLLHFAGAAF PEDSEPISIS HGNYTKQYPV FVGHKPGRNT bmy_07265T0/1-671 MRSEALLLYF TLLHFAGAAF PEDSEPISIS HGNYTKQYPV FVGHKPGRNT BACU014985/1-1044 MRSEALLLYF TLLHFAGAAF PEDSEPISIS HGNYTKQYPV FVGHKPGRNT 51 100 ENSP00000345512/1-1030 TQRHRLDIQM IMIMNGTLYI AARDHIYTVD IDTSHTEEIY CSKKLTWKSR ENSBTAP00000041442/1-1029 TQRHRLDIQM IVIMNRTLYI AARDHIYTVD IDTSHTEEIY CSKKLTWKSR ENSTTRP00000004607/1-1032 TQRHRLDIQM IMIMNRTLYI AARDHIYTVD IDTSHTEEIY CSKKLTWKSR bmy_07265T0/1-671 TQRHRLDIQM IMIMNRTLYI AARDHIYTVD IDTSHTEEIY CSKKLTWKSR BACU014985/1-1044 TQRHRLDIQM IMIMNRTLYI AARDHIYTVD IDTSHTEEIY CSKKLTWKSR 101 150 ENSP00000345512/1-1030 QADVDTCRMK GKHKDECHNF IKVLLKKNDD ALFVCGTNAF NPSCRNYKMD ENSBTAP00000041442/1-1029 QADVDTCRMK GKHKDECHNF IKVLLKKNDD TLFVCGTNAF NPSCRNYKMD ENSTTRP00000004607/1-1032 QADVDTCRMK GKHKDECHNF IKVLLKKNDD TLFVCGTNAF NPSCRNYKMD bmy_07265T0/1-671 QTDVDTCRMK GKHKDECHNF IKVLLKKNDD TLFVCGTNAF NPSCRNYKMD BACU014985/1-1044 QTDVDTCRMK GKHKDECHNF IKVLLKKNDD TLFVCGTNAF NPSCRNYKMD 151 200 ENSP00000345512/1-1030 TLEPFGDEFS GMARCPYDAK HANVALFADG KLYSATVTDF LAIDAVIYRS ENSBTAP00000041442/1-1029 TLEPVGDEFS GMARCPYDAK HANIALFADG KLYSATVTDF LAIDAVIYRS ENSTTRP00000004607/1-1032 TLEAFGDEFS GMARCPYDAK HANVALFADG KLYSATVTDF LAIDAVIYRS bmy_07265T0/1-671 TLEPFGDEFS GMARCPYDAK HANIALFADG KLYSATVTDF LAIDAVIYRS BACU014985/1-1044 TLEPFGDEFS GMARCPYDAK HANIALFADG KLYSATVTDF LAIDAVIYRS 201 250 ENSP00000345512/1-1030 LGESPTLRTV KHDSKWLKEP YFVQAVDYGD YIYFFFREIA VEYNTMGKVV ENSBTAP00000041442/1-1029 LGDSPTLRTV KHDSKWLKEP YFVQAVDYGD YIYFFFREIA VEYNSMGKVV ENSTTRP00000004607/1-1032 LGDSPTLRTV KHDSKWLKEP YFVQAVDYGD YIYFFFREIA VEYNTMGKVV bmy_07265T0/1-671 LGDSPTLRTV KHDSKWLKEP YFVQAVDYGD YIYFFFREIA VEYNTMGKVV BACU014985/1-1044 LGDSPTLRTV KHDSKWLKEP YFVQAVDYGD YIYFFFREIA VEYNTMGKVV 251 300 ENSP00000345512/1-1030 FPRVAQVCKN DMGGSQRVLE KQWTSFLKAR LNCSVPGDSH FYFNILQAVT ENSBTAP00000041442/1-1029 FPRVAQVCKN DMGGSQRVLE KQWTSFLKAR LNCSVPGDSH FYFNILQAVT ENSTTRP00000004607/1-1032 FPRVAQVCKN DMGGSQRVLE KQWTSFLKAR LNCSVPGDSH FYFNILQAVT bmy_07265T0/1-671 FPRVAQVCKN DMGGSQRVLE KQWTSFLKAR LNCSVPGDSH FYFNILQAVT BACU014985/1-1044 FPRVAQVCKN DMGGSQRVLE KQWTSFLKAR LNCSVPGDSH FYFNILQAVT 301 350 ENSP00000345512/1-1030 DVIRINGRDV VLATFSTPYN SIPGSAVCAY DMLDIASVFT GRFKEQKSPD ENSBTAP00000041442/1-1029 DVIHIHGRDV VLATFSTPYN SIPGSAVCAY DMHDIANVFT GRFKEQKSPD ENSTTRP00000004607/1-1032 DVIRINGRDV VLATFSTPYN SIPGSAVCAY DMHDVAIVFT GRFKEQKSPD bmy_07265T0/1-671 DVIRINGRDV VLATFSTPYN SIPGSAVCAY DMHDVAIVFT GRFKEQKSPD BACU014985/1-1044 DVIRINGRDV VLATFSTPYN SIPGSAVCAY DMHDVAIVFT GRFKEQKSPD 351 400 ENSP00000345512/1-1030 STWTPVPDER VPKPRPGCCA GSSSLERYAT SNEFPDDTLN FIKTHPLMDE ENSBTAP00000041442/1-1029 STWTPVPDER VPKPRPGCCA GSTSLEKYTT SNEFPDDTLN FIKTHPLMDE ENSTTRP00000004607/1-1032 STWTPVPDER VPKPRPGCCA GSSSLEKYAT SNEFPDDTLN FIKTHPLMDE bmy_07265T0/1-671 STWTPVPDER VPKPRPGCCA GSSSLEKYAT SNEFPDDTLN FIKTHPLMDE BACU014985/1-1044 STWTPVPDER VPKPRPGCCA GSSSLEKYAT SNEFPDDTLN FIKTHPLMDE 401 450 ENSP00000345512/1-1030 AVPSIFNRPW FLRTMVRYRL TKIAVDTAAG PYQNHTVVFL GSEKGIILKF ENSBTAP00000041442/1-1029 AVPSIINRPW FLRTMVRYRL TKIAVDTAAG PYQNHTVVFL GSEKGIILKF ENSTTRP00000004607/1-1032 AVPSIINKPW FLRTMVRYRL TKIAVDTAAG PYQNHTVVFL GSEKGIILKF bmy_07265T0/1-671 AVPSIINKPW FLRTMVRYRL TKIAVDTAAG PYQNHTVVFL GSEKGIILKF BACU014985/1-1044 AVPSVINKPW FLRTMVRYRL TKIAVDTAAG PYQNHTVVFL GSEKGIILKF 451 500 ENSP00000345512/1-1030 LARIGNSGFL NDSLFLEEMS VYNSEKCSYD GVEDKRIMGM QLDRASSSLY ENSBTAP00000041442/1-1029 LARTGNSGFL NDSLFLEEMS VYNPEKCSYD GVEDKRIMGM QLDKASSFLY ENSTTRP00000004607/1-1032 LARIGNSGFL NDSLFLEEMS VYNPEKCSYD GVEDKRIMGM QLDKASSSLY bmy_07265T0/1-671 LARIGNSGFL NDSLFLEEMS VYNPEKCSYD GVEDKRIMGM QLDKASSSLY BACU014985/1-1044 LARIGNSGFL NDSLFLEEMS VYNPEKCSYD GVEDKRIMGM QLDKASSSLY 501 550 ENSP00000345512/1-1030 VAFSTCVIKV PLGRCERYGK CKKTCIASRD PYCGWIKEGG ACSHLSPNSR ENSBTAP00000041442/1-1029 VAFSTCVIKV PLGRCERHGK CKKTCIASRD PYCGWVKEAG ACAHLSPSSR ENSTTRP00000004607/1-1032 VAFSTCVIKV PLGRCERHGK CKKTCIASRD PYCGWVKEGG ACAHLSPGSR bmy_07265T0/1-671 VAFSTCVIKV PLGRCERHGK CKKTCIASRD PYCGWVKEGG ACAHLSPGSR BACU014985/1-1044 VAFSTCVIKV PLGRCERHGK CKKTCIASRD PYCGWVKEGG ACAHLSPGSR 551 600 ENSP00000345512/1-1030 LTFEQDIERG NTDGLGDCHN SFVALN---- ---------- ---GHSSSLL ENSBTAP00000041442/1-1029 LTFEQDIERG NTDGLGDCHN SFVALN---- ---------- ---GHSSSLL ENSTTRP00000004607/1-1032 LTFEQDIERG NTDGLGDCHN SFVALNDIST PLPDHEMSYN TVYGHSSSLL bmy_07265T0/1-671 LTFEQDIERG NTDGLGDCHN SFVALNDIST PLPDHEMSYN TVYGHSSSLL BACU014985/1-1044 LTFEQDIERG NTDGLGDCHN SFVALNDIST PLPDHEMSYN TVYGHSSSLL 601 650 ENSP00000345512/1-1030 PSTTTSDSTA QEGYESRGGM LDWKHLLDSP DSTDPLGAVS SHNHQDKKGV ENSBTAP00000041442/1-1029 PSTTTSDSAA QEGYESRGGM MDWK---ESP DSTDSLGAVS SHNHQDKKGV ENSTTRP00000004607/1-1032 PSTTTSNSAA QEGYESRGGM LDWK---DSP DSTDSLGAVS SHNHQDKKGV bmy_07265T0/1-671 PSTTTSNSAA QEGYESRGGM LDWK---ESP DSTDSLGAVS SHNHQDKKG- BACU014985/1-1044 PSTTTSNSAA QEGYESRGGM LDWK---ESP DSTDSLGAVS SHNHQDKKGV 651 700 ENSP00000345512/1-1030 IRESYLKGHD QLVPVTLLAI AVILAFVMGA VFSGITVYCV CDHRRKDVAV ENSBTAP00000041442/1-1029 IRESYLKGHD QLVPVTLLAI AVILAFVMGA VFSGIIVYCV CDHRRKDVSS ENSTTRP00000004607/1-1032 IRESYLKGHD QLVPVTLLAI AVILAFVMGA VFSGIIVYCV CDHRRKDVSS bmy_07265T0/1-671 ---------- ---------- ---------- ---------- ---------- BACU014985/1-1044 IRESYLKGHD QLVPVTLLAI AVILAFVMGA VFSGIIVYCV CDHRRKDVSS 701 750 ENSP00000345512/1-1030 VQRKEKELTH SRRGSMSSVT KLSGLFGDTQ SKDPKPEAIL TPLMHNGKLA ENSBTAP00000041442/1-1029 VQRKEKELTH SRRGSMSSVT KLSGLFGDTQ SKDPKPEAIL TPLMHNGKLA ENSTTRP00000004607/1-1032 VHRKEKELAH SRRGSMSSVT KLSGLFGDTQ SKDPKPEAIL TPLMHNGKLA bmy_07265T0/1-671 ---------- ---------- ---------- ------KALE VPL------- BACU014985/1-1044 VQRKEKELTH SRRGSMSSVT KLSGLFGDTQ SKDPKPEAIL TPLMHNGKLA 751 800 ENSP00000345512/1-1030 TPGNTAKMLI KADQHHLDLT ALPTPESTPT LQQKRKPSRG SREWERNQNL ENSBTAP00000041442/1-1029 TPSNTAKMLI KADQHHLDLA ALPTPESTPT LQQKRKPSRG SREWERNQNL ENSTTRP00000004607/1-1032 TPSNTAKMLI KADQHHLDLA ALPTPESTPT LQQKRKPNRG SREWERNQNL bmy_07265T0/1-671 ---------- ---------- ---------- ---------- ---------- BACU014985/1-1044 TPSNTAKMLI KADQHHLDLA ALPTPESTPT LQQKRKPNRG SREWERNQNL 801 850 ENSP00000345512/1-1030 INACTKDMPP MGSPVIPTDL PLRASPSHIP SVVVLPITQQ GYQHEYVDQP ENSBTAP00000041442/1-1029 INACTKDMPP MGSPVIPTDL PLRASPSHIP SVVVLPTTRQ GYQHEYVDQP ENSTTRP00000004607/1-1032 INACTKDMPP MGSPVIPTDL PLRASPSHIP SVVVLPITQQ GYQHEYVDQP bmy_07265T0/1-671 ---------P LG-------- ---------- ---------- ---------- BACU014985/1-1044 INACTKDMPP MGSPVIPTDL PLRASPSHIP SVVVLPITQQ GYQHEYVDQP 851 900 ENSP00000345512/1-1030 KMSEVAQMAL EDQAATLEYK TIKEHLSSKS PNHGVNLVEN LDSLPPKVPQ ENSBTAP00000041442/1-1029 KMSEVAQMAL EDQAATLEYK TIKEHLSSKS PNHGVNLVEN LDSLPPKVPQ ENSTTRP00000004607/1-1032 KMSEVAQLAL EDQAATLEYK TIKEHLSSKS PNHGVNLVEN LDSLPPKVPQ bmy_07265T0/1-671 ---------- ---------- ---------- ---------- ---------- BACU014985/1-1044 KMSEVAQLAL EDQAATLEYK TIKEHLSSKS PNHGVNLVEN LDSLPPKVPQ 901 950 ENSP00000345512/1-1030 REASLGPPGA SLSQTGLSKR LEMHHSSSYG VDYKRSYPTN SLTRSHQATT ENSBTAP00000041442/1-1029 REASLGPPGA SLSQNGLSKR LEMRPSSSYG LDYKRSYPTN SLTRSHQAAT ENSTTRP00000004607/1-1032 REASLGPPGA SLSQNGLSKR LEMHHSSSYG LDYKRSYPTN SLTRSHQAAT bmy_07265T0/1-671 ---------- ---------- ---------- ---------- ---------- BACU014985/1-1044 REASLGPPGA SLSQNGLSKR LEMHHSSSYG LDYKRSYPTN SLTRSHQAAT 951 1000 ENSP00000345512/1-1030 LKRNNTNSSN SSHLSRNQSF GRGDNPPPAP QRVDSIQVHS S-QPSGQAVT ENSBTAP00000041442/1-1029 LKRNNTNSSN SSHLSRNQSF GRGDNPPPAP QRVDSIQAHS SPQPSGQAVT ENSTTRP00000004607/1-1032 LKRNNTNSSN SSHLSRNQSF GRGDNPPPAP QRVDSIQVHS S-QPSG-AVT bmy_07265T0/1-671 ---------- ---------- GEGGK----- ---------S G-EDSGTASS BACU014985/1-1044 LKRNNTNSSN SSHLSRNQSF GRGDNPPPAP QRVDSIQVHS S-QPSGQAAT 1001 1050 ENSP00000345512/1-1030 VSRQPSLN-A YNSLTRSGLK RTPSLKPDVP PKPSFAPLST SMKPNDACT ENSBTAP00000041442/1-1029 VSRQPSLNSA YNSLTRAGLK RTPSLKPDVP PKPSFAPLST SMKPNDACT ENSTTRP00000004607/1-1032 VSRQPSLN-- -YSLTRG--L RTPSLK-DVP K----LPLST SMSHD--CT bmy_07265T0/1-671 ---------- ---------- ---------- ---------- --------- BACU014985/1-1044 VSRQPSLN-A YNSLTRAGLK RTPSLKPDVP PKPSFAPLST SMKPNDACT