KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:59 2014 Check: 00 .. Name: ENSTTRP00000000082/1-903 Len: 920 Check: 1966 Weight: 1.00 Name: ENSP00000359837/1-903 Len: 920 Check: 5570 Weight: 1.00 Name: ENSBTAP00000041453/1-902 Len: 920 Check: 9289 Weight: 1.00 Name: bmy_13223T0/1-504 Len: 920 Check: 5526 Weight: 1.00 Name: BACU014789/1-888 Len: 920 Check: 8760 Weight: 1.00 // 1 50 ENSTTRP00000000082/1-903 MAASRSTRVT RSTVGLNGLD ESFCGRTLRN RSIAHPEEIS SHSQVRSRSP ENSP00000359837/1-903 MAASRSTRVT RSTVGLNGLD ESFCGRTLRN RSIAHPEEIS SNSQVRSRSP ENSBTAP00000041453/1-902 MAASRSTRVT RSTVGLNGLD ESFCGRTLRN RSIAHPEEIS SHSQVRSRSP bmy_13223T0/1-504 MAASRSTRVT RSTVGLNGLD ESFCGRTLRN RSIAHPEEIS SHSQVRSRSP BACU014789/1-888 MAASRSTRVT RSTVGLNGLD ESFCGRTLRN RSIAHPEEIS SHSQVRSRSP 51 100 ENSTTRP00000000082/1-903 KKRPEPVQIQ KGNNNGRTTD IKQQSTRESW VSPRKRGLPS SEKDNIERQS ENSP00000359837/1-903 KKRPEPVPIQ KGNNNGRTTD LKQQSTRESW VSPRKRGLSS SEKDNIERQA ENSBTAP00000041453/1-902 KKRPEPVQIQ KGNNNGRTTD IKQQSARESW VSPRKRGLPS SEKDNIERQA bmy_13223T0/1-504 KKKPEPVQIQ KGNNNGRTTD IKQQSTRESW VSPRKRGLPS SEKDNVERQS BACU014789/1-888 KKRPEPVQIQ KGNNNGRTTD IKQQSTRELW VSPRKRGLPS SEKDNVERQS 101 150 ENSTTRP00000000082/1-903 VENCERRQTE PVSPVLKRIK RCLRSEAPNS SEEDSPIKSD KESVEQRSTV ENSP00000359837/1-903 IENCERRQTE PVSPVLKRIK RCLRSEAPNS SEEDSPIKSD KESVEQRSTV ENSBTAP00000041453/1-902 VENCERRQTE PVSPVLKRIK RCLRSEAPNS SEEDSPIKSD KESVEQRSTV bmy_13223T0/1-504 VENCERRQTE PVSPVLKRIK RCLRSEAPNS SEEDSPIKSD KESVEQRSTV BACU014789/1-888 VENCERRQTE PVSPVLKRIK RCLRSEAPNS SEEDSPIKSD KESVEQRSTV 151 200 ENSTTRP00000000082/1-903 VDNDADFQGT KRACRCLILD DCEKREIKKV NVSEEGPLNS TVVEEITGYL ENSP00000359837/1-903 VDNDADFQGT KRACRCLILD DCEKREIKKV NVSEEGPLNS AVVEEITGYL ENSBTAP00000041453/1-902 VDNDADFQGT KRACRCLILD DCEKREIKKV NVSEEGPLDS TVVEEITGYL bmy_13223T0/1-504 VDNDADFQGT KRACRCLILD DCEKREIKKV NVSEEGPLNS TVVEEITGYL BACU014789/1-888 VDNDADFQGT KRACRCLILD DCEKREIKKV NVSEEGPLNS TVVEEITGYL 201 250 ENSTTRP00000000082/1-903 DVNGVDDSDS AVVNCXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000359837/1-903 AVNGVDDSDS AVINCDDCQP DGNTKQNSIG SYVLQEKSVA ENGDTDTQTS ENSBTAP00000041453/1-902 AVNGVDDSDS AVINCDDCQP DGNTKQNSTG SYVLQEKSVA ENGDSDTHAS bmy_13223T0/1-504 AVNGVDDSDS AVVNCDDCQS DGNTKQNSTG SYVLQEKSVA ENGDSDTHTS BACU014789/1-888 AVNGVDDSDS AVVNCDDCQS DGNTKQNSTG SYVLQEKSVA ENGDSDTHTS 251 300 ENSTTRP00000000082/1-903 XFLGSRKEDS YIDHNVPCTN SEVQVKLEDH KIVTACLPVE HVNQLTTEPA ENSP00000359837/1-903 MFLDSRKEDS YIDHKVPCTD SQVQVKLEDH KIVTACLPVE HVNQLTTEPA ENSBTAP00000041453/1-902 MFLDSRKEDG YINHNVPCTD SEVQVKLEDH KVVTACLPVE RVNQLTTEPA bmy_13223T0/1-504 MLLGSRKEDS YIDHNVPCTN SEVQVKLEDH KIVTACLPVE HVNQLTTEPA BACU014789/1-888 MFLGSRKEDS YIDHNVPCTN SEVQVKLEDH KIVTACLPVE HVNQLTTEPA 301 350 ENSTTRP00000000082/1-903 TGPFSEIHSS LRDSEEEVDV VGDSSASKEQ CNENTNNALD TSLESMPVSG ENSP00000359837/1-903 TGPFSETQSS LRDSEEEVDV VGDSSASKEQ CKENTNNELD TSLESMPASG ENSBTAP00000041453/1-902 TGPFAEIHSS LRDSEEEVDV VGDSSASKEQ CNESTNNALD TSLESMPVSG bmy_13223T0/1-504 TAPFSEIHSS LRDSEEEVDV VGDSSASKEQ CNENTNNALD TSLESMPVSG BACU014789/1-888 TAPFSEIHSS LRDSEEEVDV VGDSSASKEQ CNENTNNALD TSLESMPVSG 351 400 ENSTTRP00000000082/1-903 EPEPSSVLDC ISAQMMSLSE PQEHRYTLRT SPRRAAPTRG SPTKNSSPCR ENSP00000359837/1-903 EPEPSPVLDC VSAQMMSLSE PQEHRYTLRT SPRRAAPTRG SPTKNSSPYR ENSBTAP00000041453/1-902 EPEPSSVLDC VSTQMMSLSE PQEHRYTLRT SPRRAAPTRG SPTKNNSPCR bmy_13223T0/1-504 EPEPSSVLDC ISAQMMSLSE PQEHRYTLRT SPRRAAPTRG SPTKNSSPCR BACU014789/1-888 EPEPSSVLDC ISAQMMSLSE PQEHRYTLRT SPRRAAPTRG SPTKNSSPCR 401 450 ENSTTRP00000000082/1-903 ENGQLEENNL NPSETNAPVS DNISQSVTNP DEISHNEKGI CCDSENYGSE ENSP00000359837/1-903 ENGQFEENNL SPNETNATVS DNVSQSPTNP GEISQNEKGI CCDSQNNGSE ENSBTAP00000041453/1-902 ENGQFEENNL NPSETNATVS DNISESLTNP GEVSHSEKGI CCDSENYGSE bmy_13223T0/1-504 ENGQLEENNL NPSETNAPVS DNISQSLTNP DEISHNEKGI CCDSENYGSE BACU014789/1-888 ENGQLEENNL NPSETNAPVS DNISQSLTNP DEISHNEKGI CCDSENYGSE 451 500 ENSTTRP00000000082/1-903 GLSKPSSEAR LNIGHLPSAK ESANPHITEE EDDDPDVYYF ESDHVALKHN ENSP00000359837/1-903 GVSKPPSEAR LNIGHLPSAK ESASQHITEE EDDDPDVYYF ESDHVALKHN ENSBTAP00000041453/1-902 GLSKPSSEAR LNAGHLPSAK ESANPHITEE EDDDPDVYYF ESDHVALKHN bmy_13223T0/1-504 GLSKPSSEAR LNIGHLPSAK ESANPHITEE EDDDPDVYYF ESDHVALKHN BACU014789/1-888 GLNKPSSEAR LNIGHLPSAK ESANPHITEE EDDDPDVYYF ESDHVALKHN 501 550 ENSTTRP00000000082/1-903 KDYQ------ ---------- -RLLQTIAVL EAQRSQAVQD LESLGRHQRE ENSP00000359837/1-903 KDYQ------ ---------- -RLLQTIAVL EAQRSQAVQD LESLGRHQRE ENSBTAP00000041453/1-902 KDYQ------ ---------- -RLLQTIAVL EAQRSQAVQD LESLGRHQRE bmy_13223T0/1-504 KEYV------ ---------- ---------- ---------- ---------- BACU014789/1-888 KEFGTEIQHG EINILCVRNE IRLLQTIAVL EAQRSQAVQD LESLGRHQRE 551 600 ENSTTRP00000000082/1-903 ALKNPIGFVE KLQKKADIGL PYPQRVVQLP EIVWDQYTNS LGNFEREFKN ENSP00000359837/1-903 ALKNPIGFVE KLQKKADIGL PYPQRVVQLP EIVWDQYTHS LGNFEREFKN ENSBTAP00000041453/1-902 ALKNPIGFVE KLQKKADIGL PYPQRVVQLP EIVWDQYTNS LGNFEREFKN bmy_13223T0/1-504 ---------- ---------- ---------- ---------- ---------- BACU014789/1-888 ALKNPTGFVE KLQKKADIGL PYPQRVVQLP EIVWDQYTNS LGNFEREFKN 601 650 ENSTTRP00000000082/1-903 RKRHTRRVKL VFDKVGLPAR PKSPLDPRKD GESLSYSMLP LSDGPEGSNS ENSP00000359837/1-903 RKRHTRRVKL VFDKVGLPAR PKSPLDPKKD GESLSYSMLP LSDGPEGSSS ENSBTAP00000041453/1-902 RKRHTRRVKL VFDK-GLPAR PKSPLDPRKD GESLSYSMLP LSDGPEGSNS bmy_13223T0/1-504 ---------- ---------- ---------- ---------- ---------- BACU014789/1-888 RKRHTRRVKL VFDKVGLPAR PKSPLDPRKD GESLSYSMLP LSDGPEGSNS 651 700 ENSTTRP00000000082/1-903 RPQXXXXXXX XXXXXXXXXX XXXXXXXKKL EQLLLKYPPE EVESRRWQKI ENSP00000359837/1-903 RPQMIRGRLC DDTKPETFNQ LWTVEEQKKL EQLLIKYPPE EVESRRWQKI ENSBTAP00000041453/1-902 RPQMIRGRLC DDTKPETFNQ LWTVEEQKKL EQLLLKYPPE EVESRRWQKI bmy_13223T0/1-504 ---------- ---------- ---------- ---------- ---------- BACU014789/1-888 RPQMIRGRLC DDTKPETFNQ LWTVEEQKKL EQLLLKYPPE EVESRRWQKI 701 750 ENSTTRP00000000082/1-903 ADELGNRTAK QVASRVQKYF IKLTKAGIPV PGRTPNLYIY SKKSSTSRRQ ENSP00000359837/1-903 ADELGNRTAK QVASRVQKYF IKLTKAGIPV PGRTPNLYIY SKKSSTSRRQ ENSBTAP00000041453/1-902 ADELGNRTAK QVASRVQKYF IKLTKAGIPV PGRTPNLYIY SKKSSTSRRQ bmy_13223T0/1-504 ---------- ---------- ---------- ---------- ---------- BACU014789/1-888 ADELGNRTAK Q--------- ---------- ---------- ---SSTSRRQ 751 800 ENSTTRP00000000082/1-903 HPLNKHLFKP STFMTSHEPP VYMDEDDDRS CFRSHMNTAM EEASDEESIP ENSP00000359837/1-903 HPLNKHLFKP STFMTSHEPP VYMDEDDDRS CFHSHMNTAV EDASDDESIP ENSBTAP00000041453/1-902 HPLNKHLFKP STFMTSHEPP VYMDEDDDRS CFHSHMNTAV EEASDEESIP bmy_13223T0/1-504 ---------- ---------- ---------- ---------- ---------- BACU014789/1-888 HPLNKHLFKP STFMTSHEPP VYMDEDDDRS CFRSHMNTAM EEASDEESIP 801 850 ENSTTRP00000000082/1-903 IMYRNLPEYK ELLQFKKLKK QKLQQMQAES GFVQHVGFKC DNCGIEPIQG ENSP00000359837/1-903 IMYRNLPEYK ELLQFKKLKK QKLQQMQAES GFVQHVGFKC DNCGIEPIQG ENSBTAP00000041453/1-902 VTYRNLPEYK ELLQFKKLKK QKLQQIQAES GFVQHVGFKC DNCGIEPIQG bmy_13223T0/1-504 ---------- ---------- ---------- ---------- ---------- BACU014789/1-888 IMYRNLPEYK ELLQFKKLKK QKLQQMQAES GFVQHVGFKC DNCGIEPIQG 851 900 ENSTTRP00000000082/1-903 VRWHCQDCPP EMSLDFCDSC SDCLHETDIH KEDHQLEPVY RSETFLDRDY ENSP00000359837/1-903 VRWHCQDCPP EMSLDFCDSC SDCLHETDIH KEDHQLEPIY RSETFLDRDY ENSBTAP00000041453/1-902 VRWHCQDCPP EMSLDFCDSC SDCLHETDIH KEDHQLEPVY RSETFLDRDY bmy_13223T0/1-504 ---------- ---------- ---------- ---------- ---------- BACU014789/1-888 VRWHCQDCPP EMSLDFCDSC SDCLHETDIH KEDHQLEPVY RSETFLDRDY 901 950 ENSTTRP00000000082/1-903 CVSQGTSYNY LDPNYFPANR ENSP00000359837/1-903 CVSQGTSYNY LDPNYFPANR ENSBTAP00000041453/1-902 CVSQGTSYNY LDPNYFPANR bmy_13223T0/1-504 ---------- ---------- BACU014789/1-888 CVSQGTSYNY LDPNYFPANR