KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:00 2014 Check: 00 .. Name: ENSTTRP00000000421/1-438 Len: 485 Check: 769 Weight: 1.00 Name: ENSP00000310491/1-439 Len: 485 Check: 3232 Weight: 1.00 Name: ENSBTAP00000041467/1-439 Len: 485 Check: 3086 Weight: 1.00 Name: bmy_04114T0/1-438 Len: 485 Check: 3314 Weight: 1.00 Name: BACU008949/1-433 Len: 485 Check: 4540 Weight: 1.00 // 1 50 ENSTTRP00000000421/1-438 ---------- ---------- ---------- ---------- ------MDPL ENSP00000310491/1-439 ---------- ---------- ---------- ---------- ------MDPL ENSBTAP00000041467/1-439 ---------- ---------- ---------- ---------- ------MDPL bmy_04114T0/1-438 SGRGWFPFDR GAGCLPVFDR RGGGSGAPPR VLFRFCSVKL WGRGLAMDPL BACU008949/1-433 ---------- ---------- ---------- ---------- ------MDPL 51 100 ENSTTRP00000000421/1-438 SELHDDLTLD DASQALNQLK LASIDEKNWP SDEMPDFPKS DDSKSSSPEP ENSP00000310491/1-439 SELQDDLTLD DTSEALNQLK LASIDEKNWP SDEMPDFPKS DDSKSSSPEL ENSBTAP00000041467/1-439 SELQDDLTLD DPSQALNQLK LASIDEKNWP SDEMPDFPKS DDSKSSSPEP bmy_04114T0/1-438 SELQDDLTLD DTSQALNQLK LASIDEKNWP SDEMPDFPKS DDSKSSSPEP BACU008949/1-433 SELQDDLTLD DTSQALNQLK LASIDEKNWP SDEMPDFPKS DDSKSSSPEP 101 150 ENSTTRP00000000421/1-438 VTHLKWDDPY YDIARHQIVE VAGDDKYGRK IIVFSACRMP PSHQLDHSKL ENSP00000310491/1-439 VTHLKWDDPY YDIARHQIVE VAGDDKYGRK IIVFSACRMP PSHQLDHSKL ENSBTAP00000041467/1-439 VTHLKWDDPY YDIARHQIVE VAGDDKYGRK IIVFSACRMP PSHQLDHSKL bmy_04114T0/1-438 VTHLKWDDPY YDIARHQIVE VAGDDKYGRK IIVFSACRMP PSHQLDHSKL BACU008949/1-433 VTHLKWDDPY YDIARHQIVE VAGDDKYGRK IIVFSACRMP PSHQLDHSKL 151 200 ENSTTRP00000000421/1-438 LGXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXYKKN ENSP00000310491/1-439 LGYLKHTLDQ YVESDYTLLY LHHGLTSDNK PSLSWLRDAY REFDRKYKKN ENSBTAP00000041467/1-439 LGYLKHTLDQ YVESDYTLLY LHHGLTSDNK PSFSWLRDAY REFDRKYKKN bmy_04114T0/1-438 LGYLKHTLDQ YVESDYTLLY LHHGLTSDNK PSLSWLRDAY REFDRKW--- BACU008949/1-433 LGYLKHTLDQ YVESDYTLLY LHHGLTSDNK PSLSWLRDAY REFDRKYKKN 201 250 ENSTTRP00000000421/1-438 IKALYIVHPT MFIKTLLILF KPIISFKFGQ KIFYVNYLSE LSEHVKLEQL ENSP00000310491/1-439 IKALYIVHPT MFIKTLLILF KPLISFKFGQ KIFYVNYLSE LSEHVKLEQL ENSBTAP00000041467/1-439 IKALYIVHPT MFIKTLLILF KPIISFKFGQ KIFYVNYLSE LSEHVKLEQL bmy_04114T0/1-438 --ALYIVHPT MFIKTLLILF KPIISFKFGQ KIFYVNYLSE LSEHVKLEQL BACU008949/1-433 IKALYIVHPT MFIKTLLILF KPIISFKFGQ KIFYVNYLSE LSEHVKLEQL 251 300 ENSTTRP00000000421/1-438 GIPRQVLKYD DFLKSTQKSP ATAPKPMPPR PPLPNQQFGV SLQHLREKNP ENSP00000310491/1-439 GIPRQVLKYD DFLKSTQKSP ATAPKPMPPR PPLPNQQFGV SLQHLQEKNP ENSBTAP00000041467/1-439 GIPRQVLKYD DFLKSTQKSP ATAPKPMPPR PPLPNQQFGV SLQQLREKNP bmy_04114T0/1-438 GIPRQVL--- ---------- ---------- ---------- ---NLREKNP BACU008949/1-433 GIPRQVLKYD DFLKSTQKSP ATAPKPMPPR PPLPNQQFGV SLQHLREKNP 301 350 ENSTTRP00000000421/1-438 EQEPIPLVLR ETVAYLQAHA LTTEGIFRRS ANTQVVREVQ QKYNMGLPVD ENSP00000310491/1-439 EQEPIPIVLR ETVAYLQAHA LTTEGIFRRS ANTQVVREVQ QKYNMGLPVD ENSBTAP00000041467/1-439 EQQPIPLVLR ETVAYLRAHA LTTEGIFRRS ANTQVVREVQ HKYNMGLSVD bmy_04114T0/1-438 EQEPIPLVLR ETVAYLQAHA LTTEGIFRRS ANTQVVREVQ QKYNMGLPVD BACU008949/1-433 EQEPIPLVLR ETIAYLQAHA LTTEGIFRRS ANTQVVREVQ QKYNMGLPVD 351 400 ENSTTRP00000000421/1-438 FDQYNELHLP AVILKTFLRE LPEPLLTFDL YSHVVGFLNI DESQRVEATL ENSP00000310491/1-439 FDQYNELHLP AVILKTFLRE LPEPLLTFDL YPHVVGFLNI DESQRVPATL ENSBTAP00000041467/1-439 FEQYNELHLP AVILKTFLRE LPEPLLTFDL YSHVVGFLNI DESQRVKATL bmy_04114T0/1-438 FHQYNELHLP AVILKTFLRE LPEPLLTFDL YSHVVGFLNI DESQRVEATL BACU008949/1-433 FHQYNELHLP AVILKTFLRE LPEPLLTFDL YSHVVGFLNI DESQRVEATL 401 450 ENSTTRP00000000421/1-438 QAFQMLPEEN YLVLRFLTAF LVQISALCDQ NKMTNTNLAV VFGPNLLWAK ENSP00000310491/1-439 QVLQTLPEEN YQVLRFLTAF LVQISAHSDQ NKMTNTNLAV VFGPNLLWAK ENSBTAP00000041467/1-439 QALQTLPEEN YLVLRFLTAF LVQISALSDQ NKMTNTNLAV VFGPNLLWAK bmy_04114T0/1-438 QAFQMLPEEN YLVLRFLTAF LVQISALCDQ NKMTNTNLAV VFGPNLLWAK BACU008949/1-433 QAFQMLPEEN YLVLRFLTAF LVQISALCDQ NKMTNTNLAV VFGPNLLWAK 451 500 ENSTTRP00000000421/1-438 DAAITLKAIN PINTFTKFLL DHQGELFSP- DSKGL ENSP00000310491/1-439 DAAITLKAIN PINTFTKFLL DHQGELFPSP DPSGL ENSBTAP00000041467/1-439 DAAITLKAIN PINTFTKFLL DHQGELFPSP DAKGL bmy_04114T0/1-438 DAAITLKAIN PINTFTKFLL DHQGELFQP- ----- BACU008949/1-433 DAAITLKAIN PINTFTKFLL DHQGELFQP- -----