KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:01 2014 Check: 00 .. Name: ENSBTAP00000041507/1-703 Len: 703 Check: 9435 Weight: 1.00 Name: BACU015179/1-585 Len: 703 Check: 8189 Weight: 1.00 Name: ENSP00000346437/1-703 Len: 703 Check: 7758 Weight: 1.00 Name: bmy_00422T0/1-399 Len: 703 Check: 7179 Weight: 1.00 Name: ENSTTRP00000015699/1-702 Len: 703 Check: 7466 Weight: 1.00 // 1 50 ENSBTAP00000041507/1-703 MAAAMGDLGL SRLQFAPFSS ALDVGFWHEL TQKKLNEYRL DEAPKDIKGY BACU015179/1-585 ----MGDPGL SKLQFAPFSS ALDVGFWHEL TQKKLNEYRL DEAPKDIKGY ENSP00000346437/1-703 MAAATGDPGL SKLQFAPFSS ALDVGFWHEL TQKKLNEYRL DEAPKDIKGY bmy_00422T0/1-399 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015699/1-702 MAAVMGDPGL SKLQFAPFSS ALDVGFWHEL TQKKLNEYRL DEAPKDIKGY 51 100 ENSBTAP00000041507/1-703 YYNGDSVGLP ARLTLEFSAF DMSAPTPARC CPAVGILYNT NTLEAFKAAD BACU015179/1-585 YYNGDSAGLP ARLTLEFSAF DMNAPTPARC CPAVGTLYNT NTLEAFKAAD ENSP00000346437/1-703 YYNGDSAGLP ARLTLEFSAF DMSAPTPARC CPAIGTLYNT NTLESFKTAD bmy_00422T0/1-399 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015699/1-702 YYNGDSAGLP ARLTLEFSAF DMNAPTPAHC CPAVGTLYNT NTLEAFKAAN 101 150 ENSBTAP00000041507/1-703 KKLLLEEAAN EIWESIKSGA ALDNPVLLNK FLLLTFADLK KYHFYYWFCS BACU015179/1-585 KKLLLEQAAN EIWESIRSGA ALDHPVLLNK FLLLTFADLK KYHFYYWFCS ENSP00000346437/1-703 KKLLLEQAAN EIWESIKSGT ALENPVLLNK FLLLTFADLK KYHFYYWFCY bmy_00422T0/1-399 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015699/1-702 -NLLLEQAAN EIWESIRSGA ALDNPVLLNK FLLLTFADLK KYHFYYWFCS 151 200 ENSBTAP00000041507/1-703 PALCLPESIP LIQGPVALDQ WFLPKQIQAL EHAYDALCQT EGVPALPYFL BACU015179/1-585 PALCLPESIP LIRGPVGLDQ RFSPQQVSTN KTKRRNL--- ---------- ENSP00000346437/1-703 PALCLPESLP LIQGPVGLDQ RFSLKQIEAL ECAYDNLCQT EGVTALPYFL bmy_00422T0/1-399 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015699/1-702 PALCLPESIP LIRGPVGLDQ RFSPAQIQAL ERAYDDLCQT EGVPALPYFL 201 250 ENSBTAP00000041507/1-703 IKYDETTVLV SSLKHYSDFF QGQRTKITIG VYDPCNLAQY PGWPLRNLLV BACU015179/1-585 ---------- ---------- ---------- --EKLGMACL QEKPFRKFAR ENSP00000346437/1-703 IKYDENMVLV SLLKHYSDFF QGQRTKITIG VYDPCNLAQY PGWPLRNFLV bmy_00422T0/1-399 ---------- ---------- ------ITIG VYDPCNLAQY PGWPLRNFLV ENSTTRP00000015699/1-702 IKYDETMVLV SLLKHYSDFF QGQRTKITVG VYDPCNLAQY PGWPLRNFLV 251 300 ENSBTAP00000041507/1-703 LAAHRWSGSF QSVEVVCFRD RTLQGVRDVT HSIVFEVKLP EMAFSPDCPK BACU015179/1-585 ------SSSF QSVEVLCFRD RTLQGVRDVT HSIIFEVKLP EMAFSPDCPK ENSP00000346437/1-703 LAAHRWSSSF QSVEVVCFRD RTMQGARDVA HSIIFEVKLP EMAFSPDCPK bmy_00422T0/1-399 LAAHRWSSSF QSVEVLCFRD RTLQGVRDVT HSIIFEVKLP EMAFSPDCPK ENSTTRP00000015699/1-702 LAAHRWSSSF QSVEVLCFRD RTLQGMRDVT HSIIFEVKLP EMAFSPDCPK 301 350 ENSBTAP00000041507/1-703 AVGWEKNQKG GMGPRMVNLS ECMDPKRLAE SSVDLNLKLM CWRLVPTLDL BACU015179/1-585 AVGWEKNQKG GMGPRMVNLS ECMDPKRLAE SSVDLNLKLM CWRLVPTLDL ENSP00000346437/1-703 AVGWEKNQKG GMGPRMVNLS ECMDPKRLAE SSVDLNLKLM CWRLVPTLDL bmy_00422T0/1-399 AVGWEKNQKG GMGPRMVNLS ECMDPKRLAE SSVDLNLKLM CWRLVPTLDL ENSTTRP00000015699/1-702 AVGWEKNQKG GMGPRMVNLS ECMDPKRLAE SSVDLNLKLM CWRLVPTLDL 351 400 ENSBTAP00000041507/1-703 DKVVSAKCLL LGAGTLGCNV ARTLMGWGVR HITFVDNAKI SYSNPVRQPL BACU015179/1-585 DKVVSVKCLL LGAGTLGCNV ARTLMGWGVR HITFVDNAKI SYSNPVRQPL ENSP00000346437/1-703 DKVVSVKCLL LGAGTLGCNV ARTLMGWGVR HITFVDNAKI SYSNPVRQPL bmy_00422T0/1-399 DKVVSVKCLL LGAGTLGCNV ARTLMGWGVR HITFVDNAKI SYSNPVRQPL ENSTTRP00000015699/1-702 DKVVSVKCLL LGAGTLGCNV ARTLMGWGVR HITFVDNAKI SYSNPVRQPL 401 450 ENSBTAP00000041507/1-703 YEFEDCLAGG KPKALAAADR LQKIFPGVNA RGFNMSIPMP GHPVNFSSVT BACU015179/1-585 YEFEDCLAGG KPKALAAADR LQKIFPGVNA RGFNMSIPMP GHPVNFSSVT ENSP00000346437/1-703 YEFEDCLGGG KPKALAAADR LQKIFPGVNA RGFNMSIPMP GHPVNFSSVT bmy_00422T0/1-399 YEFEDCLAGG KPKALAAADR LQKIFPGVNA RGFNMSIPMP GHPVNFSSVT ENSTTRP00000015699/1-702 YEFEDCLVGG KPKALAAADR LQKIFPGVNA RGFNMSIPMP GHPVNFSSVT 451 500 ENSBTAP00000041507/1-703 LEQARRDVEQ LEQLIDSHDV VFLLMDTRES RWLPAVIAAS KRKLVINAAL BACU015179/1-585 LEQARRDVER LEQLVEGHDV ---------- ---------- ---LVINAAL ENSP00000346437/1-703 LEQARRDVEQ LEQLIESHDV VFLLMDTRES RWLPAVIAAS KRKLVINAAL bmy_00422T0/1-399 LDQARRDVER LEQLVEGHDV VFLLMDTRES RWLPTVIAAS KRKLVINAAL ENSTTRP00000015699/1-702 LEQARRDVER LEQLVEGHDV VFLLMDTRES RWLPAVIAAS KRKLVINAAL 501 550 ENSBTAP00000041507/1-703 GFDTFVVMRH GLKKPRHQGA GDLCPSYPMA SADLLSSSLF ANIPGYKLGC BACU015179/1-585 GFDTFVVMRH GLKKPKQQGA GDLCPSHPVA PADLLGPSLF ANIPGYKLGC ENSP00000346437/1-703 GFDTFVVMRH GLKKPKQQGA GDLCPNHPVA SADLLGSSLF ANIPGYKLGC bmy_00422T0/1-399 GFDTFVVMRH GLKKPKQQGA GDLCPSHPVA PADLLGPSLF ANIPGYKLGC ENSTTRP00000015699/1-702 GFDTFVVMRH GLKKPKQQGA GDLCPSHPVA PADLLGPSLF ANIPGYKLGC 551 600 ENSBTAP00000041507/1-703 YFCNDVVAPG DSTRDRTLDQ QCTVSRPGLA MIAGALAVEL MVSVLQHPEG BACU015179/1-585 YFCNDVVAPG DSTRDRTLDQ QCTVSRPGLA MIAGALAVEL MVSVLQHPEG ENSP00000346437/1-703 YFCNDVVAPG DSTRDRTLDQ QCTVSRPGLA VIAGALAVEL MVSVLQHPEG bmy_00422T0/1-399 YFCNDVVAPG DSTRDRTLDQ QCTVSRPGLA MIAGALAVEL MVSVLQHPEG ENSTTRP00000015699/1-702 YFCNDVVAPG DSTRDRTLDQ QCTVSRPGLA MIAGALAVEL MVSVLQHPEG 601 650 ENSBTAP00000041507/1-703 GYAIASSSDD RMNEPPTSLG LVPHQIRGFL SRFDNVLPVS LAFDKCTACS BACU015179/1-585 GYAIASSSDD RMNEPPTSLG LVPHQIRGFL SRFDNVLPVS LAFDKCTACS ENSP00000346437/1-703 GYAIASSSDD RMNEPPTSLG LVPHQIRGFL SRFDNVLPVS LAFDKCTACS bmy_00422T0/1-399 GYAIASSSDD RMNEPPTSLG LVPHQ----- ---------- ---------- ENSTTRP00000015699/1-702 GYAIASSSDD RMNEPPTSLG LVPHQIRGFL SRFDNVLPVS LAFDKCTACS 651 700 ENSBTAP00000041507/1-703 SKVLDQYERE GFNFLAKVFN SSHSFLEDLT GLTLLHQETQ AAEIWDMSDD BACU015179/1-585 SKVSRS---- ---------- -------TLM GLVV------ ---------- ENSP00000346437/1-703 SKVLDQYERE GFNFLAKVFN SSHSFLEDLT GLTLLHQETQ AAEIWDMSDD bmy_00422T0/1-399 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015699/1-702 SKVLDQYERE GFNFLVKVFN SSHSFLEDLT GLTLLHQETQ AAEIWDMSDD 701 750 ENSBTAP00000041507/1-703 ETI BACU015179/1-585 --- ENSP00000346437/1-703 ETI bmy_00422T0/1-399 --- ENSTTRP00000015699/1-702 ETV