KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:52:01 2014 Check: 00 .. Name: ENSTTRP00000015700/1-164 Len: 296 Check: 3736 Weight: 1.00 Name: bmy_00421T0/1-237 Len: 296 Check: 352 Weight: 1.00 Name: ENSP00000404251/1-296 Len: 296 Check: 6965 Weight: 1.00 Name: ENSBTAP00000041513/1-293 Len: 296 Check: 3288 Weight: 1.00 // 1 50 ENSTTRP00000015700/1-164 -LMERLHRDH FPESCACSNL RSTALHQGEA ALRGEPRLQT LPVASALTSH bmy_00421T0/1-237 ---------- ---------- ---------- MLAQEPQLCT L---RGLEKQ ENSP00000404251/1-296 MLFMKMDLLN YQYLDKMNNN IGILCYEGEA ALRGEPRIQT LPVASALSSH ENSBTAP00000041513/1-293 MLFMKMDLLN YQYLDNMNNN IGILCYEGEA ALRGEPRLQT LPVASALTAH 51 100 ENSTTRP00000015700/1-164 RTGPPPISPS KRKFTVEPGD DELDCESDHA SKMSRIFAPH LNKTANGDCR bmy_00421T0/1-237 KRQHP----- ---LGQLPG- ---------- ------LREE RNKTANGDCR ENSP00000404251/1-296 RTGPPPISPS KRKFSMEPGD EDLDCDNDHV SKMSRIFNPH LNKTANGDCR ENSBTAP00000041513/1-293 RTGPPPISPS KRKFSVDPGD DDLDCDGDHA SKMSRIFAPH LNKTANGDCR 101 150 ENSTTRP00000015700/1-164 KDPRERSRSP IERAVAPTMS LHGSHLYTSL PSLSMEQPLA LTKNSLDAGR bmy_00421T0/1-237 KDPRERSRSP IERAVAPTMS LHGSHLYTSL PSLSMEQPLA LTKNSLDAGR ENSP00000404251/1-296 RDPRERSRSP IERAVAPTMS LHGSHLYTSL PSLGLEQPLA LTKNSLDASR ENSBTAP00000041513/1-293 KDPRERSRSP IERAVAPTMS LHSGPLYASL PSLSMEQPLA LTKNSLDAGR 151 200 ENSTTRP00000015700/1-164 PAGLSPTMTP VERQQ----- ---------- ---------- ---------- bmy_00421T0/1-237 PAGLSPTLTP VERQQNRPSV ITCASASARN CNLSHCPIAH SGCAA-GPAS ENSP00000404251/1-296 PAGLSPTLTP GERQQNRPSV ITCASAGARN CNLSHCPIAH SGCAAPGPAS ENSBTAP00000041513/1-293 PAGLSPTLAP VERQQNRPSV ITCASASARN CNLSHCPVAH SGCAA-GPAS 201 250 ENSTTRP00000015700/1-164 ---------- ---------- ---------- ---------- ---------- bmy_00421T0/1-237 YRRAPSSATT CDPVVEEHFR RSLGKNYKEP EPAPNSVSIT GSVDDHFAKA ENSP00000404251/1-296 YRRPPSAATT CDPVVEEHFR RSLGKNYKEP EPAPNSVSIT GSVDDHFAKA ENSBTAP00000041513/1-293 YRRTPSS--T CDPVVEEHFR RSLGKNYKEP EPAPNSVSIT GSVDDHFAKA 251 300 ENSTTRP00000015700/1-164 ---------- ---------- ---------- ---------- ------ bmy_00421T0/1-237 LGDTWLQIKA AKDGASSSPE SASRRGQPAS PSAHMVSHSH SPSVAS ENSP00000404251/1-296 LGDTWLQIKA AKDGASSSPE SASRRGQPAS PSAHMVSHSH SPSVVS ENSBTAP00000041513/1-293 LGDTWLQIKA AKDGASSSPE SASRRGQPAS PSAHMVSHSH SPSVVS