KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:52:01 2014  Check: 00 ..

 Name: ENSTTRP00000006795/1-350  Len:    352  Check:  267  Weight:  1.00
 Name: ENSP00000367564/1-351     Len:    352  Check:  4248  Weight:  1.00
 Name: bmy_11297T0/1-335         Len:    352  Check:  747  Weight:  1.00
 Name: ENSBTAP00000041514/1-348  Len:    352  Check:  7841  Weight:  1.00

//


                          1                                                   50
ENSTTRP00000006795/1-350  VNSACFRSLE -AIPPPQTPA SQAPIIPPPP LPPNLPEL-A FPPSPSSLQT 
ENSP00000367564/1-351     MTSPCSPPLK PPISPPKTPV PQASSIPSPP LPPSPLDFSA LPSPPWSQQT 
bmy_11297T0/1-335         MISPESPFLE PPIPPPQTPA SQAPIIPPPL LPPNLPEL-A FPPSPSSLQT 
ENSBTAP00000041514/1-348  MISPCSPPLE PPVPPPETPA SQALSIPLPP LPLNLPEL-A FP--PSSFQA 


                          51                                                 100
ENSTTRP00000006795/1-350  PIPPPPPLPP PPPTTRFSPP HVFGLEKSQL LKEALERAGP VPRSREDVKR 
ENSP00000367564/1-351     PVPPPLPLPP PPAATGPAPR HVFGLEKSQL LKEAFDKAGP VPKGREDVKR 
bmy_11297T0/1-335         PIPPPPPMPP PPPTTGFSPP HVFGLEKSQL LKEALERAGP VPRSREDVKR 
ENSBTAP00000041514/1-348  SVPPPPPLPP PPRTTGFAPP HVFGLEKSQL LKEALERAGP APGSREDVKR 


                          101                                                150
ENSTTRP00000006795/1-350  LLKLRKNRFR SDLQWILFCA DLPSLIQEGP QCGLVALWMA GTLLAPLSGT 
ENSP00000367564/1-351     LLKLHKDRFR GDLRWILFCA DLPSLIQEGP QCGLVALWMA GTLLSPPSGV 
bmy_11297T0/1-335         LLKLHKNRFR SDLQWILFCA DLPSLIQEGP QCGLVALWMA GTLLAPLSGT 
ENSBTAP00000041514/1-348  LLKLHKDRFR SDLQWILFCA DLPSLIQEGP QCGLVALWMA GTLLAPPGGT 


                          151                                                200
ENSTTRP00000006795/1-350  PLERLVQVAM ERGYTAQGEM FSVTDMGRLA QEALGCQAEV LYGGLGGPNR 
ENSP00000367564/1-351     PLERLIRVAT ERGYTAQGEM FSVADMGRLA QEVLGCQAKL LSGGLGGPNR 
bmy_11297T0/1-335         PLERLVQVAM ERGYTAQGEM FS--GPGREQ QGR-GGD--- --GWVPGPHH 
ENSBTAP00000041514/1-348  PLERLVQVAM ERGYTAQGEM FSVADMGRLA QEALGCQAEV LCGGLGGPNR 


                          201                                                250
ENSTTRP00000006795/1-350  DHVLQHLVAG HPLLIPYDED FNHEPCQRKG HKAHWAVSAX XXXXXXXXXX 
ENSP00000367564/1-351     DLVLQHLVTG HPLLIPYDED FNHEPCQRKG HKAHWAVSAG VLLGVRAVPS 
bmy_11297T0/1-335         SFGLNPSAS- ------YDED FNHEPCQRKG HKAHWAVSAG VLLGVQGMPS 
ENSBTAP00000041514/1-348  DHVLQHIVAG HPLLIPYDED FNHEPCQRRG HKAHWAVSAG VLLGVQHVPS 


                          251                                                300
ENSTTRP00000006795/1-350  XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 
ENSP00000367564/1-351     LGYTEDPELP GLFHPVLGTP CQPPSLPEEG SPGAVYLLSK QGKSWHYQLW 
bmy_11297T0/1-335         LGYDEDPELP GLFHPAPGTP RQPPSLPEEG SPGAVYLLAK QGKSWHYQLW 
ENSBTAP00000041514/1-348  LGYSEDPELP GLFHPVPGTP HQPPSLPEEG SPGAVYLLAK QGKSWHHQLW 


                          301                                                350
ENSTTRP00000006795/1-350  XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXCS 
ENSP00000367564/1-351     DYDQVRESNL QLTDFSPSRA TDGRVYVVPV GGVRAGLCGQ ALLLTPQDCS 
bmy_11297T0/1-335         DYDLVRASNL QLTDFSPSRA ADGREYVVPV GGLRAGLCGQ ALLLRPRDSG 
ENSBTAP00000041514/1-348  DYDQVRDSNL QLTDFSPSRA ADGREYVVPA GGVRAGLCGQ ALLLRPQDSS 


                          351                                                400
ENSTTRP00000006795/1-350  PE 
ENSP00000367564/1-351     H- 
bmy_11297T0/1-335         H- 
ENSBTAP00000041514/1-348  H-