KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:11 2014 Check: 00 .. Name: BACU005865/1-419 Len: 485 Check: 2955 Weight: 1.00 Name: ENSP00000262445/1-399 Len: 485 Check: 2318 Weight: 1.00 Name: ENSBTAP00000041598/1-412 Len: 485 Check: 8653 Weight: 1.00 Name: bmy_15300T0/1-422 Len: 485 Check: 8400 Weight: 1.00 Name: ENSTTRP00000011685/1-360 Len: 485 Check: 3977 Weight: 1.00 // 1 50 BACU005865/1-419 ---------- ---------- ---------- ---------- ---------- ENSP00000262445/1-399 MAAPSPSGGG GSGGGS--GS GTPGPVGSPA PGHPAVSSM- ---------- ENSBTAP00000041598/1-412 MAAPSPSGGG GGGGGSGGGS GTPGPAGSPA PGHPAVSSMQ GFQINFCEKA bmy_15300T0/1-422 -MEPQIVAVV NQETKFVFGA YCQMRIIALI LYDLTAPVLK DMK---YVTE ENSTTRP00000011685/1-360 ---------- ---------- ---------- ---------- ---------- 51 100 BACU005865/1-419 --KRKALKLN FANPPFKSTA RFTLNPNPAG VQNPHIERLR THSIESSGKL ENSP00000262445/1-399 QGKRKALKLN FANPPFKSTA RFTLNPNPTG VQNPHIERLR THSIESSGKL ENSBTAP00000041598/1-412 QSKRKALKLN FANPPFKSTA RFTLNPNPAG VQNPHIERLR THSIESSGKL bmy_15300T0/1-422 QGKRKALKLN FANPPFKSTA RFTLNPNPAG VQNPHIERLR THSIESSGKL ENSTTRP00000011685/1-360 --KRKALKLN FANPPFKSTA RFTLNPNPAG VQNPHIERLR THSIESSGKL 101 150 BACU005865/1-419 KISPEQHWDF TAEDLKDLGE IGRGAYGSVN KMVHKPSGQI MAVK------ ENSP00000262445/1-399 KISPEQHWDF TAEDLKDLGE IGRGAYGSVN KMVHKPSGQI MAVK------ ENSBTAP00000041598/1-412 KISPEQHWDF TAEDLKDLGE IGRGAYGSVN KMVHKPSGQI MAVK------ bmy_15300T0/1-422 KISPEQHWDF TAEDLKDLGE IGRGAYGSVN KMVHKPSGQI MAVKLFYVFV ENSTTRP00000011685/1-360 KISPEQHWDF TAEDLKDLGE IGRGAYGSVN KMVHKPSGQI MAVK------ 151 200 BACU005865/1-419 --------RI RSTVDEKEQK QLLMDLDVVM RSSDCPYIVQ FYGALFREGD ENSP00000262445/1-399 --------RI RSTVDEKEQK QLLMDLDVVM RSSDCPYIVQ FYGALFREGD ENSBTAP00000041598/1-412 --------RI RSTVDEKEQK QLLMDLDVVM RSSDCPYIVQ FYGALFREGD bmy_15300T0/1-422 TNFVIFFQRI RSTVDEKEQK QLLMDLDVVM RSSDCPYIVQ FYGALFREGD ENSTTRP00000011685/1-360 --------RI RSTVDEKEQK QLLMDLDVVM RSSDCPYIVQ FYGALFREGD 201 250 BACU005865/1-419 CWICMELMST SFDKFYKYVY SVLDDVIPEE ILGKITLATV KALNHLKENL ENSP00000262445/1-399 CWICMELMST SFDKFYKYVY SVLDDVIPEE ILGKITLATV KALNHLKENL ENSBTAP00000041598/1-412 CWICMELMST SFDKFYKYVY SVLDDVIPEE ILGKITLATV KALNHLKENL bmy_15300T0/1-422 CWICMELMST SFDKFYKYVY SVLDDVIPEE ILGKITLATV KALNHLKENL ENSTTRP00000011685/1-360 CWICMELMST SFDKFYKYVY SVLDDVIPEE ILGKITLATV KALNHLKENL 251 300 BACU005865/1-419 KIIHRDIKPS NILLDRSGNI KLCDFGISGQ LVDSIAKTRD AGCRPYMAPE ENSP00000262445/1-399 KIIHRDIKPS NILLDRSGNI KLCDFGISGQ LVDSIAKTRD AGCRPYMAPE ENSBTAP00000041598/1-412 KIIHRDIKPS NILLDRSGNI KLCDFGISGQ LVDSIAKTRD AGCRPYMAPE bmy_15300T0/1-422 KIIHRDIKPS NILLDRSGNI KLCDFGISGQ LVDSIAKTRD AGCRPYMAPE ENSTTRP00000011685/1-360 KIIHRDIKPS NILLDRSGNI KLCDFGISGQ LVDSIAKTRD AGCRPYMAPE 301 350 BACU005865/1-419 RIDPSASRQG YDVRSDVWSL GITLYELATG RFPYPKWNSV FDQLTQVVKG ENSP00000262445/1-399 RIDPSASRQG YDVRSDVWSL GITLYELATG RFPYPKWNSV FDQLTQVVKG ENSBTAP00000041598/1-412 RIDPSASRQG YDVRSDVWSL GITLYELATG RFPYPKWNSV FDQLTQVVKG bmy_15300T0/1-422 RIDPSASRQG YDVRSDVWSL GITLYELATG RFPYPKWNSV FDQLTQVVKG ENSTTRP00000011685/1-360 RIDPSASRQG YDVRSDVWSL GITLYELATG RFPYPKWNSV FDQLTQVVKG 351 400 BACU005865/1-419 DPPQLSNSEE REFSPSFINF VNLCRDSGHC GYVEGSSSLA RRRSLTLLLS ENSP00000262445/1-399 DPPQLSNSEE REFSPSFINF VNLC------ ---------- ---------- ENSBTAP00000041598/1-412 DPPQLSNSEE REFSPSFINF VNLC------ ---------- ---------- bmy_15300T0/1-422 DPPQLSNSEE REFSPSFINF VNLC------ ---------- ---------- ENSTTRP00000011685/1-360 DPPQLSNSEE REFSPSFINF VNLC------ ---------- ---------- 401 450 BACU005865/1-419 LTKDESKRPK YKELLTNPAP YPFPVPAANL ISEAGDTITE AELPTQFYEQ ENSP00000262445/1-399 LTKDESKRPK YKELLKHPFI LMYEERAVEV ACYVCK---- ---------- ENSBTAP00000041598/1-412 LTKDESKRPK YKELLKHPFI LMYEERAVEV ACYVCK---- ---------- bmy_15300T0/1-422 LTKDESKRPK YKELLKHPFI LMYEERAVEV ACYVCK---- ---------- ENSTTRP00000011685/1-360 LTKDESKRPK YKELLKHPFI LMYEERAVEV ACYVCK---- ---------- 451 500 BACU005865/1-419 PLPLKHGIME DSPAGVSSNV TYSEDLLKLY LKLLF ENSP00000262445/1-399 -------ILD QMPATPSSPM ---------Y VD--- ENSBTAP00000041598/1-412 -------ILD QMPATPSSPM ---------Y VD--- bmy_15300T0/1-422 -------ILD QMPATPSSPM ---------Y VD--- ENSTTRP00000011685/1-360 -------ILD QMPATPSSPM ---------Y VD---