KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:18 2014 Check: 00 .. Name: ENSTTRP00000000735/1-362 Len: 400 Check: 4449 Weight: 1.00 Name: ENSP00000418744/1-386 Len: 400 Check: 27 Weight: 1.00 Name: bmy_15378T0/1-365 Len: 400 Check: 5822 Weight: 1.00 Name: BACU004623/1-339 Len: 400 Check: 5328 Weight: 1.00 Name: ENSBTAP00000041643/1-334 Len: 400 Check: 1010 Weight: 1.00 // 1 50 ENSTTRP00000000735/1-362 ---------- ---------- ----FTEEKL GQAEKTELDA HLENLLSKAE ENSP00000418744/1-386 MNIMDFNVKK LAADAGTFLS RAVQFTEEKL GQAEKTELDA HLENLLSKAE bmy_15378T0/1-365 MNIMDFNVKK LAADAGTFLS RAVQFTEEKL GQAEKTELDA HLENLLSKAE BACU004623/1-339 MNIMDFNVKK LAADAGTFLS RAVQFTEEKL GQAEKTELDA HLENLLSKAE ENSBTAP00000041643/1-334 MNIMDFNVKK LAADAGTFLS RAVQFTEEKL GQAEKTELDA HLENLLSKAE 51 100 ENSTTRP00000000735/1-362 CTKIWTEKIM KQTEVLLQPN PNARIEEFVY EKLDRKAPSR INNPELLGQY ENSP00000418744/1-386 CTKIWTEKIM KQTEVLLQPN PNARIEEFVY EKLDRKAPSR INNPELLGQY bmy_15378T0/1-365 CTKVWTEKIM KQTEVLLQPN PNARIEEFVY EKLDRKAPSR INNPELLGQY BACU004623/1-339 CTKVWTEKIM KQTEVLLQPN PNARIEEFVY EKLDRKAPSR INNPELLGQY ENSBTAP00000041643/1-334 CTKIWTEKIM KQTEVLLQPN PNARIEEFVY EKLDRKAPSR INNPELLGQY 101 150 ENSTTRP00000000735/1-362 MIDAGTEFGP GTAYGNALIK CGETQKRIGT ADRELIQTSA LNFLTPLRNF ENSP00000418744/1-386 MIDAGTEFGP GTAYGNALIK CGETQKRIGT ADRELIQTSA LNFLTPLRNF bmy_15378T0/1-365 MIDAGTEFGP GTAYGNALIK CGETQKRIGT ADRELIQTSA LNFLTPLRNF BACU004623/1-339 MIDAGTEFGP GTAYGNALIK CGETQKRIGT ADRELIQTSA LNFLTPLRNF ENSBTAP00000041643/1-334 MIDAGTEFGP GTAYGNALIK CGETQKRIGT ADRELIQTSA LNFLTPLRNF 151 200 ENSTTRP00000000735/1-362 IEGDYKTIAK ERKLLQNKRL DLDAAKTRLK KAKAAETRAS QLNSARLEGD ENSP00000418744/1-386 IEGDYKTIAK ERKLLQNKRL DLDAAKTRLK KAKAAETRNS QLNSARLEGD bmy_15378T0/1-365 IEGDYKTIAK ERKLLQNKRL DLDAAKTRLK KAKAAETRAS ---------- BACU004623/1-339 IEGDYKTIAK ERKLLQNKRL DLDAAKTRLK KAKAAETRAS ---------- ENSBTAP00000041643/1-334 IEGDYKTIAK ERKLLQNKRL DLDAAKTRLK KAKAAETRAS ---------- 201 250 ENSTTRP00000000735/1-362 NIMIWAEEVT KSEQELRITQ SEFDRQAEIT RLLLEGISST H----XXXXX ENSP00000418744/1-386 NIMIWAEEVT KSEQELRITQ SEFDRQAEIT RLLLEGISST H----AHHLR bmy_15378T0/1-365 ---------- -SEQELRITQ SEFDRQAEIT RLLLEGISST H----AHHLR BACU004623/1-339 ---------- -SEQELRITQ SEFDRQAEIT RLLLEGISST HECSGSRKAR ENSBTAP00000041643/1-334 ---------- -SEQELRITQ SEFDRQAEIT RLLLEGISST H----AHHLR 251 300 ENSTTRP00000000735/1-362 XXXXXXXXXX XXXX----XX XXXXXXXXX- -XXXXFPSVY --HCNNNQTS ENSP00000418744/1-386 CLNDFVEAQM TYYA----QC YQYMLDLQK- -QLGSFPSNY --LSNNNQTS bmy_15378T0/1-365 CLNDFVEAQM TYYA----QC YQYMLDLQK- -QLGSFPSIY --HCNNNQTS BACU004623/1-339 VLYDYDAANS TELSLLADEM IQWLLTHADL CALDGLPSTC ENLTRRAQLN ENSBTAP00000041643/1-334 CLNDFVEAQM TYYA----QC YQYMLDLQK- -QLGSFPSNY --HSNNNQTA 301 350 ENSTTRP00000000735/1-362 VAPIPSASSN VIGSSPLTST SGLVITSPSN LTDLKECSGS RKARVLYDYD ENSP00000418744/1-386 VTPVPSVLPN AIGSSAMAST SGLVITSPSN LSDLKECSGS RKARVLYDYD bmy_15378T0/1-365 VAPIPSASSN VIGSSALTST SGLVITSPSN LTDLKECSGS RKARVLYDYD BACU004623/1-339 KGALTFLNKE LVKHYFSFTF SPLEKENPHG --------G- ---------- ENSBTAP00000041643/1-334 VAPVPSASSN VIGSSALTST SSLVITSPSN LTDLKECGGS RRARVLYDYD 351 400 ENSTTRP00000000735/1-362 AANSTELSLL ADEVITVFSV VGMDSDWLMG ERGNQKGRVP ITYLELLN-- ENSP00000418744/1-386 AANSTELSLL ADEVITVFSV VGMDSDWLMG ERGNQKGKVP ITYLELLN-- bmy_15378T0/1-365 AANSTELSLL ADEVITVFSV VGMDSDWLMG ERGNQKGRVP ITYLELLN-- BACU004623/1-339 ------ISFL VESCL----- ---------- ENHPGNLRIS QTRFDLIRAK ENSBTAP00000041643/1-334 AANSTELSLL ADEVSNV--- ---------- ---------- ----------