KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:19 2014 Check: 00 .. Name: ENSP00000385452/1-318 Len: 444 Check: 4408 Weight: 1.00 Name: ENSBTAP00000041651/1-262 Len: 444 Check: 7799 Weight: 1.00 Name: ENSTTRP00000004909/1-371 Len: 444 Check: 1970 Weight: 1.00 Name: bmy_01072T0/1-268 Len: 444 Check: 3783 Weight: 1.00 Name: BACU018988/1-361 Len: 444 Check: 3241 Weight: 1.00 // 1 50 ENSP00000385452/1-318 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000041651/1-262 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004909/1-371 MSGLNYIICA TALLQAPGGL AGKS-GIVLP QHSFPQHKSV MRFTCWIRNK bmy_01072T0/1-268 ---------- ---------- ---------- ---------- ---------- BACU018988/1-361 ---------- TALLRAPGGL AGQGVGCSCP QRSFPQHR-V MSFTCWIRNK 51 100 ENSP00000385452/1-318 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000041651/1-262 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004909/1-371 VYFEQSSMSV CGSSLHRSPV TWVAGRGRER RSCLTPIPPS VADT--ASLF bmy_01072T0/1-268 ---------- ---------- ---------- ---------- ---------- BACU018988/1-361 IYFE-PSMSV CGSSLHRSPV TWVAGRGR-R RSCLTHRSPP LWQTPLPSDS 101 150 ENSP00000385452/1-318 ---------- -MLPLTMT-V LILLLLPTGQ AAPKDGVT-- ---------- ENSBTAP00000041651/1-262 ---------- -MLPVKMR-T LLLLLLPLSQ AAPKDGTM-- ---------- ENSTTRP00000004909/1-371 PNPFLLPATG RMLPVTMRTS VLLLLLPLSQ AVPKHGTT-- ---------- bmy_01072T0/1-268 ---------- ---------M LVLLLPPLSQ AAPKDGTTRG GSLQGRCFPP BACU018988/1-361 LTLFLLPATG RMLPVTMRML VLLLLLPLSQ AAPKDGTT-- ---------- 151 200 ENSP00000385452/1-318 --RPDSEVQH QLLPNPFQPG QEQLGLLQSY LKGLGRTEVQ LEHLSREQVL ENSBTAP00000041651/1-262 --RLHPEAQH LPLPNPFEPG QEQLRLLQSY LKGLERMEEE PEHMSREQVL ENSTTRP00000004909/1-371 --RLDPEVQH PPLPNPFQPG QEQLQLLQSY LKGLERMEEE PEHMSREQVL bmy_01072T0/1-268 SSRLDPEVQH PPLPNPFQPG QEQLQLLQSY LKGLERMEEE PEHMSREQVL BACU018988/1-361 --RLDPEVQH RPLPNPFQPG QEQLQLLQSY LKGLERMEEE PEHMSREQVL 201 250 ENSP00000385452/1-318 LYLFALHDYD QSGQLDGLEL LSMLTAALAP GAANSPTTNP VILIVDKVLE ENSBTAP00000041651/1-262 LYLFALHDYD QSGQLDGLEL LSMLTAALAP GASDSPTTNP VILVVDKVLE ENSTTRP00000004909/1-371 LYLFALHDYD QSGQLDGLEL LSMLTATLAP GASDSLTTNP VILVVDEVLE bmy_01072T0/1-268 LYLFALYDYD QSGQLDGLEL LSMLTATLAP GASDSPTTNP VILVVDEVLD BACU018988/1-361 LYLFALHDYD QSGQLDGLEL LSMLTATLAP GASDSPTTNP VILVVDEVLE 251 300 ENSP00000385452/1-318 TQDLNGDGLM TPAELINFPG VALRHVEPGE PLAPSPQEPQ AVGRQSLLAK ENSBTAP00000041651/1-262 TQDLNGDGLM TPAELVNFPG EAPRHTEPRE -----PPEPQ DVEMQPLLAK ENSTTRP00000004909/1-371 TQDLNGDGLM TPAELVNFPG EAPRHTDLKE -----PQEPQ DVGRRPLLAK bmy_01072T0/1-268 TQDLNGDGLM TPAELVNFPG EDPRHTDLKE -----PPEPQ DVGRQPLLAK BACU018988/1-361 TQDLNGDGLM TPAELVNFPG EDPRHTDLKE -----PPEPQ DVGRQPLLAK 301 350 ENSP00000385452/1-318 SPLRQETQEA PGPREEAKGQ VEARRESLDP VQEPGGQAEA DGDVPGPRGE ENSBTAP00000041651/1-262 SPSRQEEHDT LSPGEAAGGQ AEARREFLEP VQEAG----- ---------- ENSTTRP00000004909/1-371 SPSRQEAHEA PGPREEAGGQ VEARRESLEP VQEAG----- ---------- bmy_01072T0/1-268 SPSRQEAHEA PGPREEAGGQ MEARRESLEP VQEAG----- ---------- BACU018988/1-361 SPSRQEAHEA PGPREEAGGQ VEARRESLEP VQEAG----- ---------- 351 400 ENSP00000385452/1-318 AEGQAEAKGD APGPRGEAGG QAEAEGDAPG PRGEAGGQAE AEGDAPGPRG ENSBTAP00000041651/1-262 ---------- ---------- ---------- ------GQAD AVREAPGPGG ENSTTRP00000004909/1-371 ---------- ---------- ---------- ------GQAE AAREAPGPGG bmy_01072T0/1-268 ---------- ---------- ---------- ------GQAE AAREAPGPGG BACU018988/1-361 ---------- ---------- ---------- ------GQAE AAREAPGPGG 401 450 ENSP00000385452/1-318 EAGGQAEARE NGEEAKELPG ETLESKNTQN DFEVHIVQVE NDEI ENSBTAP00000041651/1-262 EVGGQVETGD AGERAEELLG ETLGSKNSPN ELEVHAIQLE NSEM ENSTTRP00000004909/1-371 EVGGQVEARD TGERAEELPR ETLESKKTPN ELEVHAVQLE NDEI bmy_01072T0/1-268 EVGRQVEARD TGER-EELPR ETLESKKTPN ELEVHAIQLE NDEI BACU018988/1-361 EVGEQVEARD TGERAEELPR ETLESKKTPN ELEVHAIQLE NDEI