KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:52:24 2014 Check: 00 .. Name: ENSP00000356518/1-653 Len: 747 Check: 8020 Weight: 1.00 Name: bmy_10503T0/1-453 Len: 747 Check: 7099 Weight: 1.00 Name: ENSTTRP00000007261/1-707 Len: 747 Check: 6400 Weight: 1.00 Name: ENSBTAP00000041741/1-651 Len: 747 Check: 8416 Weight: 1.00 // 1 50 ENSP00000356518/1-653 ---------- ---------- -MASGSK--- ---------- ---------- bmy_10503T0/1-453 MKTLHGERIL FLDGSELAQN LPSPPPRRAP QYPYPPPNPR TTRDTRTRAH ENSTTRP00000007261/1-707 ---------- ---------Y LQAPHPR--- ---------- ----TRTRAH ENSBTAP00000041741/1-651 ---------- ---------- -MASGSR--- ---------- ---------- 51 100 ENSP00000356518/1-653 ---------- ---------- ---------- ---------- ---------A bmy_10503T0/1-453 HPIPQLPPGG LPSSRRARCS PIGPRARREK RLTAASGPQG AEEMASGSRA ENSTTRP00000007261/1-707 HPIP-LPPGS PRAA--ARCS PIDPRDPGRK RLTVAX-XXX XXXXXXXXXX ENSBTAP00000041741/1-651 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000356518/1-653 SVPADSFRTI SPDRRGEKSA SAVSGDTAAA TTLKGTAIPV RSVVASPRPV bmy_10503T0/1-453 TVPEDSDRTV SPGRRGEKAV SALTGDSVEA GTLKSAASAL RSVVASPRPV ENSTTRP00000007261/1-707 XXXXXXXXXX XXXXXXXKAV SALTGDSVEA GTLKSAASAV RWVVASPRPV ENSBTAP00000041741/1-651 -LPEDAVRGV SPGQRGEKIV SALTGDLVMA AALKSAASPM RSVVASPRPV 151 200 ENSP00000356518/1-653 KGKAGRETAR LRLQRLPAAQ AEDTGEAAAA AAEEPLLPVP EDEEE-AQPL bmy_10503T0/1-453 KRKAGREAAQ RRLQLLPGSQ AEGRGQGPEE EEEEPLLSVP EEDDGKAQPL ENSTTRP00000007261/1-707 KRKAVREAAQ RRLQLLPGSQ AEGRGPEPEE EEEEPLLSVP EEDDEKAQPL ENSBTAP00000041741/1-651 KGTAGREAAR RRLQLLPGSQ AEGPGQGPEE EEEEPLLSVP EEDEE-ARPL 201 250 ENSP00000356518/1-653 PPVCVSRMRG MWRDEKVSLY CDEVLQDCKA EDADEVMGKY LSEKLKLKDK bmy_10503T0/1-453 PPVCVSPMRG MWREEKVALY CDEVLQGCKA EDADDAMSKY LSEKLKLKGT ENSTTRP00000007261/1-707 PPVCVSPMRG MWREEKVALY CDEVLQGCKA EDADDAMCRY LSEKLKLKGK ENSBTAP00000041741/1-651 PPVCVFPMRG MWREEKVALY CDEVLQGYKA EDADDAMSKY LSEKLKLKDK 251 300 ENSP00000356518/1-653 WLGVWKTNPS VFFVKYEEAS IPFVGILVEV TCEPYQDSSS RFKVTVSVAE bmy_10503T0/1-453 WLGVWKTNPE LFFVKYEEAS ISFVGILVEV TCKLRQSSSS CFKVTVSVAE ENSTTRP00000007261/1-707 WLGVWKTNPE LFFVKYEEAS ISFVGILVEV TCKLRQSSSS CFKVTVSVAE ENSBTAP00000041741/1-651 WLGVWKANPE LFFVKYEESS IPFVGILVEV TCKPSQSSSS CFNVTVSVAE 301 350 ENSP00000356518/1-653 PFSSNIANIP RDLVDEILEE LEHSVPLLEV YPVEGQDTDI HVIALALEVV bmy_10503T0/1-453 PFSSNIANIP RDLVDEILEE LEHSVPLLEV YPVEGQDSDL HDIALALEVV ENSTTRP00000007261/1-707 PFSSNIANIP RDLVDEILEE LEHSVPLLEV YPVEGQDSDS HDIALALEVV ENSBTAP00000041741/1-651 PFSSNIANIP RDLVDEILEE LEHSVSLLEV YPVEGQDSDL HDIALALEVV 351 400 ENSP00000356518/1-653 RFFYDFLWRD WDDEESCENY TALIEERINL WCDIQDGTIP GPIAQRFKKT bmy_10503T0/1-453 RFFYDFLWRD WDDEESCENY TALIEERINL WCDIQDGTIP GPIAQRFKKT ENSTTRP00000007261/1-707 RFFYDFLWRD WDDEESCENY TALIEERINL WCDIQDGTIP GPIAQRFKKT ENSBTAP00000041741/1-651 RFFYDFLWRD WDDEESCENY TALIEERINL WCDIQDGTIP GPIAQRFKKT 401 450 ENSP00000356518/1-653 LEKYKNKRVE LIEYQSNIKE DPSAAEAVEC WKKYYEIVML CGLLKMWEDL bmy_10503T0/1-453 LEKYKNKRIE LIEYQSNIKE DPSAAEAVEC WKKYYEIVML CGLLKMWEDL ENSTTRP00000007261/1-707 LEKYKNKRIE LIEYQSNIKE DPSAAEAVEC WKKYYEIVML CGLLKMWEDL ENSBTAP00000041741/1-651 LEKYKNKRVE LIEYQSNIKE DPSAAEAVEC WKKYYEIVML CGLLKMWEDL 451 500 ENSP00000356518/1-653 RLRVHGPFFP RILRRRKGKR EFGKTITHIV AKMMTTEMIK DLSSDTLLQQ bmy_10503T0/1-453 RLR------- ---------- ---------- ---------- ---------- ENSTTRP00000007261/1-707 RLRVHGPFFP RILRRRKGKR DFGKTITHIV AKVMTTDMVK DLSSDTLLQQ ENSBTAP00000041741/1-651 RLRVHGPFFP RILRRRKGKR NFGKTITHIV AKVMTTDMVK DLSPDTLLQQ 501 550 ENSP00000356518/1-653 HGDLDLALDN CYSGDTVIIF PGEYQAANLA LLTDDIIIKG VGKREEIMIT bmy_10503T0/1-453 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007261/1-707 HDDLDLALDS CYSGDTVVIF PGEYQAVNLA LLTDDIVIKG IGKREEIMIT ENSBTAP00000041741/1-651 HDDLDLALDS CYSGDTVVIF PGEYQAVNLA LLTDDIVIKG IGKREEIMIT 551 600 ENSP00000356518/1-653 SEPSRDSFVV SKADNVKLMH LSLIQQGTVD GIVVVESGHM TLENCILKCE bmy_10503T0/1-453 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007261/1-707 SEPSYDSFVV SKADNVKLMH LSLIQQGTVD GIVVVESGHM TLENCVLKCE ENSBTAP00000041741/1-651 SEPSHDSFVV SKADNVKLMH LSLIQQGTVD GIVVVESGHM TLENCVLKCE 601 650 ENSP00000356518/1-653 GTGVCVLTGA ALTITDSEIT GAQGAGVELY PGSIAILERN EIHHCNNLRT bmy_10503T0/1-453 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007261/1-707 GTGVCXXXXX XXXXXXXXXX XXXGAGVELY PGSIAILERN EIHHCNNLRT ENSBTAP00000041741/1-651 GTGVCVLTGA ALTITDSEIT GAQGAGVELY PGSVAILERN EIHHCNNLRT 651 700 ENSP00000356518/1-653 SNSSKSTLGG VNMKVLPAPK LKMTNNHIYS NKGYGVSILQ PMEQFFIVAE bmy_10503T0/1-453 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007261/1-707 TDSSKSTLGG VNMKVLPAPK LKMTNNHIYN NNGYGVSILQ PTEQFFIVAE ENSBTAP00000041741/1-651 CDSSKSTLGG VNMKVLPAPK LKMTNNHIYN NNGYGVSILQ PTEQFFIVAE 701 750 ENSP00000356518/1-653 EALNKRASSG DKKDDKMLFK VMQNLNLEMN NNKIEANVKG DIRIVTS bmy_10503T0/1-453 ---------- ---------- ---------- ---------- ------- ENSTTRP00000007261/1-707 EALSKGTASG DKKDDNMLSK VMQNLNLEMS NNKIEANLKG AIRIVTS ENSBTAP00000041741/1-651 EVLNKGAASG DKRDDNMLSK VMQNLNLEMN NNKIEANLKG DIRIVTS