KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:26 2014 Check: 00 .. Name: ENSP00000457748/1-1076 Len: 1118 Check: 1350 Weight: 1.00 Name: ENSBTAP00000041768/1-1069 Len: 1118 Check: 2545 Weight: 1.00 Name: BACU005795/1-943 Len: 1118 Check: 4114 Weight: 1.00 Name: ENSTTRP00000010187/1-421 Len: 1118 Check: 7064 Weight: 1.00 Name: bmy_21489T0/1-595 Len: 1118 Check: 1515 Weight: 1.00 // 1 50 ENSP00000457748/1-1076 -----MSSAE IIGSTNLIIL LEDEVFADFF NTFLSLPVFG QTPFYTVENS ENSBTAP00000041768/1-1069 -----FSPIE IIGSTNLIIL LEDEIFADFF NTFLSLPVFG QTPFYTVENS BACU005795/1-943 MRVFFSPHIE IIGSTNLIIL LEDEVFADFF NTFLSLPVFG QTPFYTFENS ENSTTRP00000010187/1-421 -----MSNAE MIGSTNLIFL LEDETFADFF NTFLSLLVFG QTPFYTLENS bmy_21489T0/1-595 ---------- ---------- ---------- -------VFG QTPFYTLENS 51 100 ENSP00000457748/1-1076 QWSLWPEIPC NLIAKYKGLL TWLEKCRLPF FCKTNLCFHY ILCQEFISFI ENSBTAP00000041768/1-1069 QWGLWPEIPH DLIAKYKGLL TWLEKYRLPF FCKANLCFHY ILCQEFISFI BACU005795/1-943 QWSLWPEIPH DLVAKYKGLL TWLEKYRLPF FCKTDLCFHY ILCQEFLTFV ENSTTRP00000010187/1-421 -WSLWPEIPH DLIAKYKGLL TWLEKYRLPF FCKTNLWFHY ILCQEFISFV bmy_21489T0/1-595 QWSLWPEIPH DLIAKYKGLL TWLEKYRLPF FCKTDLCFHY ILCQEFLTFV 101 150 ENSP00000457748/1-1076 KSPEG----- ---------- ---------- ---------- GEELVDFWIL ENSBTAP00000041768/1-1069 KSPEG----- ---------- ---------- ---------- GEELVDFWIL BACU005795/1-943 KSPEGAKMMR WKKADQWLLQ KCIGGVRGMW RFCTYLKGSA GEELVDFWIL ENSTTRP00000010187/1-421 QSPEG----- ---------- ---------- ---------- ---------- bmy_21489T0/1-595 KSPEG----- ---------- ---------- ---------- GEELVDFWIL 151 200 ENSP00000457748/1-1076 AENILSIDEM DLEVRDYYLS LLLMLRATHL QEGSRVVTLC NMNIKSLLNL ENSBTAP00000041768/1-1069 VEKILSIDEM DLEVRNHYLS LLFVLKATHL QESSRVVTLC NMNIKALLNL BACU005795/1-943 AEKILSINEM DLEVRDHYLS LLFMLKATHL QESSRVVTLC NMNIEALLNL ENSTTRP00000010187/1-421 ---------- ---------- ---------- ---------- ----EALLN- bmy_21489T0/1-595 AEKILSINEM DLEVRDHYLS LLFMLKATHL QESSRVVTLC NVNINALLNL 201 250 ENSP00000457748/1-1076 SIWHPNQSTT RREILSHMQK VALFKLQSYW LPNFYTHTKM TMAKEEACHG ENSBTAP00000041768/1-1069 SIWHPNQSTT RREILSHMQK VALFKLQSYW LPNFYTHAKT VMAKEESCQA BACU005795/1-943 SIWHPNQSTT RREILSHMQK VALFKLQSYW LPNFYTHAKT IMAKEESCQA ENSTTRP00000010187/1-421 SVWHPNQSTI RREILSHKQK VALFKLQSYW LPNFYTHAKT IMAKEESCQA bmy_21489T0/1-595 SIWHPNQSTT RREILSHMQK VALFKLQSYW LPNFYTHAKT IMAKEESCQA 251 300 ENSP00000457748/1-1076 LMQEYETRLY SVCYTHIGGL PLNMSIKKCH HFQKRYSSRK AKRKMWQLVD ENSBTAP00000041768/1-1069 LMQEYETRLY SICYTHEGGL PLNMNIKKAH QPQKHYSSRK IKRKMWHLID BACU005795/1-943 LMQEYETRLY SICYTHIGGL PLSMSVKKGH HPQKRYSSRK AKRKMWHLID ENSTTRP00000010187/1-421 LMQEYETRLY SICYTHVGGL PLSMSIKKGH HPQKRYSSGK AKRKMWQLTD bmy_21489T0/1-595 LMQEYETRLY SICYTHVGGL PLSMSVKKGH HPQKRYSSRK AKRKMWQLID 301 350 ENSP00000457748/1-1076 PDSWSLEMDL KPDAIGMPLQ ETCPQEKVVI QMPSLKMASS KETRISSLEK ENSBTAP00000041768/1-1069 CGSWSLEMDT NPDTNTVPPP ELDSQDKVVI QKPFPKEASS KDRIISSPEK BACU005795/1-943 HGSWSLEVDT NPDTNTLLPQ ELFPQGKLVI QTPSPKETSS KERFIGSQEK ENSTTRP00000010187/1-421 QGSWSLEVNT NPDTNTLLPQ ELFPQGKLVI QMPSPKETSL KVRIISFQEE bmy_21489T0/1-595 HGSWSLEVDT NPDTXTLLPQ ELFPQGKLVI QMPSLKETSS KERIIGSQEK 351 400 ENSP00000457748/1-1076 DMHYAKISSM ENKAKSHLHM EAPFETKVST HLRTVIPIVN HSSKMTIQKA ENSBTAP00000041768/1-1069 DVLYARKSNV KKKAKSHLHM EGLFETAFST HLRTVTPIIN YSSHVTIKKA BACU005795/1-943 DILCAKKTKV KNKAKSHLHM EGLIETSFST HLRTVTPIIN YSPHMTIKKA ENSTTRP00000010187/1-421 DILCAKKSNV KNKAKSHLHM EGLFETSFFT HLRTVTPIIN YSPHMTIKKA bmy_21489T0/1-595 DILCAKKSNV KNKAXSHLHM EGLFETSFFT HLRTVTPIIN YSPHMIIKKA 401 450 ENSP00000457748/1-1076 IKQSFSLGYI HLALCADACA GNPFRDHLKK LNLKVEIQLL DLWQDLQHFL ENSBTAP00000041768/1-1069 VKQNLSLGYT HWALCADACA GSPFRDHLKK LNLKVEIQLL DLWQDLHHFL BACU005795/1-943 VKQNLSLEYT HWALCADACA GSPFRDHLKK QNLKVEVQLL DLWQDLHHFL ENSTTRP00000010187/1-421 MEQNLSLGYT HWALCADACA GSPFRDHLKK QNLKVGVQLL DLWQDLHDFL bmy_21489T0/1-595 VKQNLSLGYT HWALCADACA GSPFRDYLKK QNLKVEVQLL DLLQDLHHFL 451 500 ENSP00000457748/1-1076 SVLLNNKKNG NAIFRHLLGD RICELYLNEQ IGPCLPLKSQ TIQGLKELLP ENSBTAP00000041768/1-1069 CVLMSNRKTG KAIFRHMLGN RICELYLNEQ IGPCLPLKSQ TIEGLKEMLP BACU005795/1-943 SVLMSNRKTG KAIFRHMLGN RICELYLNEQ IGLCLPLKSQ TIKGLKELLP ENSTTRP00000010187/1-421 SVLMSNRKTG KAIFWHMLGN RICELYLNEQ IGLRLPLKSQ TIKGLKELLP bmy_21489T0/1-595 SVLMSNRKTG KAIFRHMLGN RICELYLNEQ IGLRLPLKSQ TIKGLKELLP 501 550 ENSP00000457748/1-1076 SGDVIPWIPK AQKEICKMLS PWYDEFLDEE DYWFLLFTTQ NRFISSRQHK ENSBTAP00000041768/1-1069 SGDVNPWIPR TQKEICKILS PWYTEFLDEE DYWFLVFTTQ SRLIRTKWHK BACU005795/1-943 SGDVNPWIPR AQKEICK--- ---------- --------TQ SRLTRTRWHQ ENSTTRP00000010187/1-421 SGDVNLWIPR AQKEICN--- ---------- ---------- ---------- bmy_21489T0/1-595 SGDVNPWIPR AQKEICKMLS RWYAEFLDEE DYWFLIFTTQ SRLTRTRWHK 551 600 ENSP00000457748/1-1076 REFIGKEENI LLYKRIQQSL ELSQALADMK EMDYRQWRKI ATEDLKQGGS ENSBTAP00000041768/1-1069 KESISKEDII LLYKRFEESL ELSQGLANME EMESMQWQKI ATEDLKQGGS BACU005795/1-943 RESISKEETI LLYKRFEESL ELSQGLANME EMESMQWQKI ATQDLKQGGS ENSTTRP00000010187/1-421 ---------- ---------- ---------- ---------- ---------- bmy_21489T0/1-595 RESISREATI LLYKRFEESL ELSQGLANME EMESMEWQKI ATEDLKQGGS 601 650 ENSP00000457748/1-1076 LQVELTSPVF LTDITKMSFE ELCYKNPKMA IQKISDDYKI YCEKAPKIDF ENSBTAP00000041768/1-1069 LRVERKSPVF LADIEKMAFE ELCYKYPKVA IEKISEDYKI YCEKVPHIDF BACU005795/1-943 LRLERTTPAF LADIEKMSFE ELCCKYPKVV IEKTSDDYKI YCEKGPQIDF ENSTTRP00000010187/1-421 ---------- ---------- ---------- ---------- ---------- bmy_21489T0/1-595 LRLERTTPVF LADIEKMSFE ELCCKYPKVA IEKISK---- ---------- 651 700 ENSP00000457748/1-1076 KMEIIKETKT VSRSNRKMSL LKRTLVRKPS MRPRNLTEVL LNTQHLEFFR ENSBTAP00000041768/1-1069 TVEIFREPKM VLPSKRRMSF FKRANVRKPS IRPRNLTEVL LNTQHLEFFR BACU005795/1-943 TVEIVREPRK ISPSHRRMSF FKRTNIRKPL IRPR------ ---------- ENSTTRP00000010187/1-421 ---------- ---------- ---------- ---------- ---------- bmy_21489T0/1-595 ---------- --------CL NSRIDLRQPG KR-------- ---------- 701 750 ENSP00000457748/1-1076 EFLKERKAKI PLQFLTAVQK ISIETNEKIC KSLIENVIKT FFQGQLSPEE ENSBTAP00000041768/1-1069 EFLRERRAET PLQFLVAIQK ISVETNEKIY NSLFENVIKT FFHGKNSPEQ BACU005795/1-943 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010187/1-421 ---------- ---------- ---------- ---------- ---------- bmy_21489T0/1-595 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000457748/1-1076 MLQCDAPIIK EIASMRHVTT STLLTLQGHV MKSIEEKWFK DYQDLFPPHH ENSBTAP00000041768/1-1069 MLQCNAPLIK EVSLMHHVST TTLLMLQGFV MRSLEEKWFK DYQELFPPQ- BACU005795/1-943 ---------- ---------- ---------- --------FK DYQDLFPPH- ENSTTRP00000010187/1-421 ---------- ---------- ---------- ---------- ---------- bmy_21489T0/1-595 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000457748/1-1076 QEVEVQSEVQ ISSRKPSKIV STYLQESQKK GWMRMISFIR SFCKYRRFML ENSBTAP00000041768/1-1069 -PLEKEAEIP IASPKKPSKT AVYLQESQKR GWLKMISFIR SFCNYRRFMS BACU005795/1-943 -PLEKETEIP VASPRKPSKT ATYLQESQKR GWLKMISFIK RFCKYRRFMS ENSTTRP00000010187/1-421 ---------- ---------- ---------- ---------- ---------- bmy_21489T0/1-595 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000457748/1-1076 NPSKRQEFED YLHQEMQNSK ENFTTAHNTS GRSAPPSTNV RSADQENGEI ENSBTAP00000041768/1-1069 HPHKRQELED YLHLEVHN-K ENFSTAPNIS GRPM-PNPSV RSTDHENGDI BACU005795/1-943 NPQKRQEFED YLHLEVHNNK ENFSTSPNIS GLPV-TNPNI QSADHENGDI ENSTTRP00000010187/1-421 ---------- ---------- ---------- ---------- ---------- bmy_21489T0/1-595 ---------- ---------- ---------- -----ESPNS RG-------- 901 950 ENSP00000457748/1-1076 TLVKRRIFGH RIITVNFAIN DLYFFSEMEK FNDLVSSAHM LQVNRAYNEN ENSBTAP00000041768/1-1069 VLMKRRVFGH RIIIINYAVN DFYFFSEMEK FNDLVSSARV LQVNRAYNEN BACU005795/1-943 ILMKRRIFGH RIITVNFAIN DLYFFSEMEK FNGLVSSAHV LQVNRAYNEN ENSTTRP00000010187/1-421 ---------- ---------- ---------- ---------- ---------- bmy_21489T0/1-595 -IAKRRMVSR E--------- ---------- ---------- ---------- 951 1000 ENSP00000457748/1-1076 DVILMRSKMN IIQKLFLNSD IPPKLRVNVP EFQKDAILAA ITEGYLDRSV ENSBTAP00000041768/1-1069 DVILMKSKIS IILKLYLHAD VPPRLRVNIS DAQKDAILTA ISDGRLDRSI BACU005795/1-943 DVILMKSKIN IILKLYLHSE VPPRLRVNIS ESQKDAILAT IAEGHLDRSI ENSTTRP00000010187/1-421 ---------- ---------- ---------- ---------- ---------- bmy_21489T0/1-595 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSP00000457748/1-1076 FHGAIMSVFP VVMYFWKRFC FWKATRSYLQ YRGKKFKDRK SPPKSTDKYP ENSBTAP00000041768/1-1069 FHGAIMSVFP IIMYFWKRFC AWKAIQSYFQ YMGKKFKDII ISPKPVYKHP BACU005795/1-943 FHGAIMALFP VIMYFWKRFC SWKAIRSYVQ HRGQKFKDKI VSPKPVYKYP ENSTTRP00000010187/1-421 ---------- ---------- ---------- ---------- ---------- bmy_21489T0/1-595 ---------- ---------- ---------- ---------- ---------- 1051 1100 ENSP00000457748/1-1076 FSSGGDNAIL RFTLLRGIEW LQPQR--EAI SSVQNSSSSK LTQPRLVVSA ENSBTAP00000041768/1-1069 PWSGGDQAIL RFTLCRGIEW LRPQPRDAAG SSVQNSSSSI FTQSRHAISA BACU005795/1-943 PWSGGDNAVL RFTLLRGIEW L--------- ---------- ---------- ENSTTRP00000010187/1-421 ---------- ---------- ---------- ---------- ---------- bmy_21489T0/1-595 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSP00000457748/1-1076 MQLHPVQGQK LSYIKKEK ENSBTAP00000041768/1-1069 MQLCPVPGIL TTL----- BACU005795/1-943 ---------- -------- ENSTTRP00000010187/1-421 ---------- -------- bmy_21489T0/1-595 ---------- --------