KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:52:27 2014 Check: 00 .. Name: ENSBTAP00000041788/1-638 Len: 837 Check: 4659 Weight: 1.00 Name: BACU003317/1-720 Len: 837 Check: 5522 Weight: 1.00 Name: bmy_01585T0/1-732 Len: 837 Check: 936 Weight: 1.00 Name: ENSTTRP00000009744/1-551 Len: 837 Check: 8457 Weight: 1.00 // 1 50 ENSBTAP00000041788/1-638 ---------- ---------- ---------- ---------- --------MA BACU003317/1-720 ---------- ---------- ---------- ---------- ---------- bmy_01585T0/1-732 MVAVCRLEAL PDGFAAELVY LMWEEDGELL VRPGLLHLQR PLPTHLEEPP ENSTTRP00000009744/1-551 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000041788/1-638 AQAGDDAWRC QGCGDYVAPN QRLYRTVSEA WPTSC----- ---------- BACU003317/1-720 ---------- ---------- -----MSVQT WPENAPRPD- ---------- bmy_01585T0/1-732 KGAADPACSW CYCFQGKSTA RVLFFQLSHV LPAGCAACPG ICPNKQDGQV ENSTTRP00000009744/1-551 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000041788/1-638 ---------- ---------- ---------- -FRCSECQDS LTNWYYEKDG BACU003317/1-720 ---------- ---------- ---------- -RRCSECQDS LTNWYYEKDG bmy_01585T0/1-732 LPNSMEAGEA WVWAARSTFQ GSRRVSVLIL PFRCSECQDS LTNWYYEKDG ENSTTRP00000009744/1-551 ---------- ---------- ---------- ---CSECQDS LTNWYYEKDG 151 200 ENSBTAP00000041788/1-638 KLYCHKDYWG KFGEFCHGCS LLMTGPVMVA GEFKYHPECF ACMSCKVIIE BACU003317/1-720 KLYCHKDYWG KFGEFCHGCS LLMTGPVMVA GEFKYHPECF ACMSCKVIIE bmy_01585T0/1-732 KLYCHKDYWG KFGEFCHGCS LLMTGPVMVA GEFKYHPECF ACMSCKVIIE ENSTTRP00000009744/1-551 KLYCHKDYWG KFGEFCHGCS LLMTGPVMVA GEFKYHPECF ACMSCKVIIE 201 250 ENSBTAP00000041788/1-638 DGDAYALVQH ATLYCGKCHN EVVLAPMFER LSTESVQDQL PYSVTHISMP BACU003317/1-720 DGDAYALVQH ATLYCGKCHN EVVLAPMFER LSTESVQDQL PYSVTHISMP bmy_01585T0/1-732 DGDAYALVQH ATLYCGKCHN EVVLAPMFER LSTESVQDQL PYSVTHISMP ENSTTRP00000009744/1-551 DGDAYALVQH ATLYCGKCHN EVVLAPMFER LSTESVQDQL PYSVTHISMP 251 300 ENSBTAP00000041788/1-638 ATTEGRRGFS VSVESACSNY ATTVQVREVN RMHISPNNRN AIHPGDRILE BACU003317/1-720 ATTEGRRGFS VSVESACSNY ATTVQVKEVN RMHISPNNRN AIHPGDRILE bmy_01585T0/1-732 ATTEGRRGFS VSVESACSNY ATTVQVKEVN RMHISPNNRN AIHPGDRILE ENSTTRP00000009744/1-551 ATTEGRRGFS VSVESACSSY ATTVQVKEVN RMHISPNNRN AIHPGDRILE 301 350 ENSBTAP00000041788/1-638 INGAPVRTLR VEEVEDAISQ TTQTLQLLIE HDPVSQRLDQ LQLDARLSPC BACU003317/1-720 INGTPVRTLQ VEEVEDAISQ TSQTLQLLIE HDPVSQRLDQ LRLDARLSPH bmy_01585T0/1-732 INGTPVRTLR VEEVEDAISQ TSQTLQLLIE HDPVSQRLDQ LRLDARLSPH ENSTTRP00000009744/1-551 INGTPVRTLR VEEVEDAISQ TSQTLQLLIE HDPVSQRLDQ LRLDARLSPH 351 400 ENSBTAP00000041788/1-638 AQNDRHAHTL SPLDTKENLE GTLRRRSLRR SNSISKSPGP SSPKEPLLLS BACU003317/1-720 MQNARHSGTL SPLDTKENLE GTLRRRSLRR SNSISKSPGP SSPKEPLLLS bmy_01585T0/1-732 MQNARHSGTL SPLDTKENLE GTLRRRSLRR SNSISKSPGP SSPKEPLLLS ENSTTRP00000009744/1-551 MQNARHSDTL IPLDTKENLE GTLRRRSLRR SNSISKSPGP SSPKEPLLLS 401 450 ENSBTAP00000041788/1-638 RDISRSESLR CSSSCSQQIF RPCDLIHGEV LGKGFFGQAI KVTHKATGKV BACU003317/1-720 RDISRSESLR CSSSYSQQIF RPCDLIHGEV LGKGFFGQAI KVTHKATGKV bmy_01585T0/1-732 RDISRSESLR CSSSYSQQIF RPCDLIHGEV LGKGFFGQAI KVTHKATGKV ENSTTRP00000009744/1-551 RDISRSESLR CSSSYSQQIF RPCDLIHGEV LGKGFFGQAI KVTHKATGKV 451 500 ENSBTAP00000041788/1-638 MVMKELIRCD EETQKTFLTE VKVMRSLDHP NVLKFIGVLY KDKKLNLLTE BACU003317/1-720 MVMKELIRCD EETQKTFLTE VKVMRSLDHP NVLKFIGVLY KDKKLNLLTE bmy_01585T0/1-732 MVMKELIRCD EETQKTFLTE VKVMRSLDHP NVLKFIGVLY KDKKLNLLTE ENSTTRP00000009744/1-551 MVMKELIRCD EETQKTFLTE VKVMRSLDHP NVLKFIGVLY KDKKLNLLTE 501 550 ENSBTAP00000041788/1-638 YIEGGTLKDF LRNVDPFPWQ QKVRFAKGIA SGMAYLHSMC IIHRDLNSHN BACU003317/1-720 YIEGGTLKDF LRSVDPFPWQ QKVSFAKGIA SGMAYLHSMC IIHRDLNSHN bmy_01585T0/1-732 YIEGGTLKDF LRSVDPFPWQ QKVSFAKGIA SGMAYLHSMC IIHRDLNSHN ENSTTRP00000009744/1-551 YIEGGTLKDF LRSVDPFPWQ QKVSFAKGIA SGMAYLHSMC IIHRDLNSHN 551 600 ENSBTAP00000041788/1-638 CLIKLDKTVV VADFGLSRLI VEERKKPPVE KATTKKRTLR KSDRKKRYTV BACU003317/1-720 CLIKLDKTVV VADFGLSRLI VEERKKPPVE KATTKKRTLR KSDRKKRYTV bmy_01585T0/1-732 CLIKLDKTVV VADFGLSRLI VEERKKPPVE KATTKKRTLR KSDRKKRYTV ENSTTRP00000009744/1-551 CLIKLDKTVV VADFGLSRLI VEERKKPPVE KATTKKRTLR KSDRKKRYTV 601 650 ENSBTAP00000041788/1-638 VGNPYWMAPE MLNGKSYDET VDVFSFGIVL CE-------- ---------- BACU003317/1-720 VGNPYWMAPE MLNGKSYDET VDVFSFGIVL CEALVLPPPS AQQGEAATPG bmy_01585T0/1-732 VGNPYWMAPE MLNGKSYDET VDVFSFGIVL CE-------- ---------- ENSTTRP00000009744/1-551 VGNPYWMAPE MLNGKSYDET VDVFSFGIVL CE-------- ---------- 651 700 ENSBTAP00000041788/1-638 ---------- -----IIGQV YADPDCLPRT LDFGLNVKLF WEKFVPEECP BACU003317/1-720 SAGPCGTALG SVGCRIIGQV YADPDCLPRT LDFGLNVKLF WEKFVPTDCP bmy_01585T0/1-732 ---------- -----IIGQV YADPDCLPRT LDFGLNVKLF WEKFVPTDCP ENSTTRP00000009744/1-551 ---------- -----IIGQV YADPDCLPRT LDFGLNVKLF WEKFVPTDCP 701 750 ENSBTAP00000041788/1-638 PAFFPLAAIC CRLEPESRPA FSKLEDFFEA LSLYLGELGI PLPTELEDLD BACU003317/1-720 PAFFPLAAIC CRLEPESRPA FSKLEDSFEA LSLYLGDLGI PLPAELEELD bmy_01585T0/1-732 PAFFPLAAIC CRLEPESRPA FSKLEDSFEA LSLYLGDLGI PLPAELEELD ENSTTRP00000009744/1-551 PAFFPLAAIC CRLEPES--- ---------- ---------- ---------- 751 800 ENSBTAP00000041788/1-638 HT---VSMEY GLIRNPPP-- ---------- ---------- ---------- BACU003317/1-720 HTPRPSPLRG GVPQPALPPL HPIPAVGRAF CASCGLAACL EAEPAIPTTS bmy_01585T0/1-732 HT---VSVQY GLTRDSPP-- ---------- ---------- ---------- ENSTTRP00000009744/1-551 ---------- ---------- ---------- ---------- ---------- 801 850 ENSBTAP00000041788/1-638 ---------- ---------- ---------- ------- BACU003317/1-720 PGGERVQHRG NHLHRFWGLV TVCKSNTRLK AVKKKTN bmy_01585T0/1-732 ---------- ---------- ---------- ------- ENSTTRP00000009744/1-551 ---------- ---------- ---------- -------